RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 CEP131Q9UPN4 1083 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 PPP6R1Q9UPN7 881 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 NACAP1Q9BZK3 213 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 FGD5Q6ZNL6 1462 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 CEP135Q66GS9 1140 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 FERMT3Q86UX7 667 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 ANO10Q9NW15 660 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 MPHOSPH10O00566 681 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 TMC6Q7Z403 805 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 PSMD1Q99460 953 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 TBC1D2Q9BYX2 928 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 GUCY1B3Q02153 619 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 FYCO1Q9BQS8 1478 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 PRXQ9BXM0 1461 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 MACROD2A1Z1Q3 448 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 TDO2P48775 406 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 CKAP2LQ8IYA6 745 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 ZSWIM4Q9H7M6 989 aa12.82□□□□□ -0.36
GTF3C1-201ENST00000356183 GNL3LQ9NVN8 582 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 TSG101Q99816 390 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 NLRP2Q9NX02 1062 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 CETN2P41208 172 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 ADCY5O95622 1261 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 MYL6BP14649 208 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 IRX3P78415 501 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 DAAM2Q86T65 1068 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 HSF2BPO75031 334 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 PAFAH1B1P43034 410 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 GAPVD1Q14C86 1478 aa12.81□□□□□ -0.36
GTF3C1-201ENST00000356183 SNW1Q13573 536 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 SKAP1Q86WV1 359 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 RSPH14Q9UHP6 348 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 CLGNO14967 610 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 SPECC1LQ69YQ0 1117 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 UBAC1Q9BSL1 405 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 XRCC6P12956 609 aaKnown RBP eCLIP12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 MVPQ14764 893 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 NUTM1Q86Y26 1132 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 RBM27Q9P2N5 1060 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 ANKRD18BA2A2Z9 1011 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 SSFA2P28290 1259 aa12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 PRPF4BQ13523 1007 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-201ENST00000356183 BMS1Q14692 1282 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 TDRD12Q587J7 1177 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 USO1O60763 962 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 PPM1FP49593 454 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 NBPF8Q3BBV2 869 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 HOOK3Q86VS8 718 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 TTC16Q8NEE8 873 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 CFAP57Q96MR6 1250 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 PAIP2Q9BPZ3 127 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 C6orf163Q5TEZ5 329 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 ISM2Q6H9L7 571 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 TNPO1Q92973 898 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 PTPRGP23470 1445 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 IL1RAPL2Q9NP60 686 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 WASF1Q92558 559 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 ZNF830Q96NB3 372 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 NCOA2Q15596 1464 aa12.79□□□□□ -0.36
GTF3C1-201ENST00000356183 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 MICALL1Q8N3F8 863 aa12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 HSPA4P34932 840 aa12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 CCDC96Q2M329 555 aa12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 HOMER2Q9NSB8 354 aa12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 PPP1R12BO60237 982 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 CCDC6Q16204 474 aa12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 ZSCAN25Q6NSZ9 544 aa12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 SRCIN1Q9C0H9 1055 aa12.78□□□□□ -0.36
GTF3C1-201ENST00000356183 YEATS4O95619 227 aa12.77□□□□□ -0.36
GTF3C1-201ENST00000356183 PRIMPOLQ96LW4 560 aa12.77□□□□□ -0.36
GTF3C1-201ENST00000356183 HFM1A2PYH4 1435 aa12.77□□□□□ -0.36
GTF3C1-201ENST00000356183 SMARCA5O60264 1052 aaPredicted RBP12.77□□□□□ -0.36
GTF3C1-201ENST00000356183 CEP112Q8N8E3 955 aa12.77□□□□□ -0.36
GTF3C1-201ENST00000356183 ALS2CR12Q96Q35 445 aa12.77□□□□□ -0.36
GTF3C1-201ENST00000356183 MXRA7P84157 204 aa12.77□□□□□ -0.37
GTF3C1-201ENST00000356183 CTNNA2P26232 953 aa12.77□□□□□ -0.37
GTF3C1-201ENST00000356183 NBPF1Q3BBV0 1214 aa12.77□□□□□ -0.37
GTF3C1-201ENST00000356183 JADE2Q9NQC1 790 aa12.77□□□□□ -0.37
GTF3C1-201ENST00000356183 FBF1Q8TES7 1133 aa12.77□□□□□ -0.37
GTF3C1-201ENST00000356183 BIN1O00499 593 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 NAA15Q9BXJ9 866 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 HYPKQ9NX55 129 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 ZNF644Q9H582 1327 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 A0A1W2PRG0 241 aa12.76□□□□□ -0.37
GTF3C1-201ENST00000356183 CYB5RLQ6IPT4 315 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms