RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 BRPF1P55201 1214 aaPredicted RBP22.13■■□□□ 1.13
NPAS3-202ENST00000356141 RNMTO43148 476 aaKnown RBP22.13■■□□□ 1.13
NPAS3-202ENST00000356141 MFAP1P55081 439 aaKnown RBP22.13■■□□□ 1.13
NPAS3-202ENST00000356141 CCDC30Q5VVM6 783 aa22.12■■□□□ 1.13
NPAS3-202ENST00000356141 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
NPAS3-202ENST00000356141 RGS12O14924 1447 aa22.12■■□□□ 1.13
NPAS3-202ENST00000356141 AIMP1Q12904 312 aaKnown RBP22.12■■□□□ 1.13
NPAS3-202ENST00000356141 AKAP4Q5JQC9 854 aa22.12■■□□□ 1.13
NPAS3-202ENST00000356141 ARXQ96QS3 562 aa22.12■■□□□ 1.13
NPAS3-202ENST00000356141 CHD1LQ86WJ1 897 aa22.12■■□□□ 1.13
NPAS3-202ENST00000356141 OTUD7AQ8TE49 926 aaPredicted RBP22.12■■□□□ 1.13
NPAS3-202ENST00000356141 PROSER3Q2NL68 480 aa22.11■■□□□ 1.13
NPAS3-202ENST00000356141 SMC5Q8IY18 1101 aa22.11■■□□□ 1.13
NPAS3-202ENST00000356141 SPATA31A3Q5VYP0 1347 aa22.11■■□□□ 1.13
NPAS3-202ENST00000356141 NFATC2IPQ8NCF5 419 aa22.11■■□□□ 1.13
NPAS3-202ENST00000356141 EIF4A1P60842 406 aaKnown RBP22.1■■□□□ 1.13
NPAS3-202ENST00000356141 TOM1L2Q6ZVM7 507 aa22.1■■□□□ 1.13
NPAS3-202ENST00000356141 TRPM3Q9HCF6 1732 aaPredicted RBP22.09■■□□□ 1.13
NPAS3-202ENST00000356141 HTATSF1O43719 755 aaKnown RBP22.08■■□□□ 1.13
NPAS3-202ENST00000356141 AAMPQ13685 434 aa22.08■■□□□ 1.13
NPAS3-202ENST00000356141 TSHZ3Q63HK5 1081 aa22.08■■□□□ 1.13
NPAS3-202ENST00000356141 INTS3Q68E01 1043 aaKnown RBP22.08■■□□□ 1.13
NPAS3-202ENST00000356141 NUCB1Q02818 461 aa22.08■■□□□ 1.13
NPAS3-202ENST00000356141 TATP17735 454 aaPredicted RBP22.07■■□□□ 1.12
NPAS3-202ENST00000356141 DDX54Q8TDD1 881 aaKnown RBP22.07■■□□□ 1.12
NPAS3-202ENST00000356141 MYL6BP14649 208 aa22.07■■□□□ 1.12
NPAS3-202ENST00000356141 SPRYD3Q8NCJ5 442 aa22.07■■□□□ 1.12
NPAS3-202ENST00000356141 EXOC6BQ9Y2D4 811 aa22.07■■□□□ 1.12
NPAS3-202ENST00000356141 TNS3Q68CZ2 1445 aa22.06■■□□□ 1.12
NPAS3-202ENST00000356141 STRCQ7RTU9 1775 aa22.06■■□□□ 1.12
NPAS3-202ENST00000356141 AMOTQ4VCS5 1084 aa22.06■■□□□ 1.12
NPAS3-202ENST00000356141 CEP85Q6P2H3 762 aa22.06■■□□□ 1.12
NPAS3-202ENST00000356141 SLIT3O75094 1523 aa22.05■■□□□ 1.12
NPAS3-202ENST00000356141 PTPRCP08575 1304 aa22.05■■□□□ 1.12
NPAS3-202ENST00000356141 PI4KAP2A4QPH2 592 aa22.05■■□□□ 1.12
NPAS3-202ENST00000356141 PI4KAP1Q8N8J0 262 aa22.05■■□□□ 1.12
NPAS3-202ENST00000356141 MEGF6O75095 1541 aa22.04■■□□□ 1.12
NPAS3-202ENST00000356141 CEMIPQ8WUJ3 1361 aa22.03■■□□□ 1.12
NPAS3-202ENST00000356141 CYP27B1O15528 508 aa22.03■■□□□ 1.12
NPAS3-202ENST00000356141 LRRFIP2Q9Y608 721 aaKnown RBP22.03■■□□□ 1.12
NPAS3-202ENST00000356141 A0A0G2JS52 829 aa22.02■■□□□ 1.12
NPAS3-202ENST00000356141 PNMA6EA0A0J9YXQ4 647 aa22.02■■□□□ 1.12
NPAS3-202ENST00000356141 EVA1CP58658 441 aa22.02■■□□□ 1.12
NPAS3-202ENST00000356141 LARP1Q6PKG0 1096 aaKnown RBP22.02■■□□□ 1.12
NPAS3-202ENST00000356141 JARID2Q92833 1246 aaPredicted RBP22.02■■□□□ 1.12
NPAS3-202ENST00000356141 PKNOX2Q96KN3 472 aa22.01■■□□□ 1.11
NPAS3-202ENST00000356141 XIRP1Q702N8 1843 aaKnown RBP22.01■■□□□ 1.11
NPAS3-202ENST00000356141 TULP1O00294 542 aaPredicted RBP22■■□□□ 1.11
NPAS3-202ENST00000356141 PHKG2P15735 406 aa22■■□□□ 1.11
NPAS3-202ENST00000356141 ZBTB4Q9P1Z0 1013 aaPredicted RBP22■■□□□ 1.11
NPAS3-202ENST00000356141 KIF1AQ12756 1690 aa21.99■■□□□ 1.11
NPAS3-202ENST00000356141 ANKRD44Q8N8A2 993 aa21.99■■□□□ 1.11
NPAS3-202ENST00000356141 ALS2Q96Q42 1657 aa21.99■■□□□ 1.11
NPAS3-202ENST00000356141 NBPF7P0C2Y1 421 aaPredicted RBP21.98■■□□□ 1.11
NPAS3-202ENST00000356141 CWF19L2Q2TBE0 894 aaKnown RBP21.98■■□□□ 1.11
NPAS3-202ENST00000356141 USP54Q70EL1 1684 aa21.98■■□□□ 1.11
NPAS3-202ENST00000356141 KAT6BQ8WYB5 2073 aa21.98■■□□□ 1.11
NPAS3-202ENST00000356141 PIP4K2BP78356 416 aa21.98■■□□□ 1.11
NPAS3-202ENST00000356141 GIGYF1O75420 1035 aaPredicted RBP21.98■■□□□ 1.11
NPAS3-202ENST00000356141 GCC1Q96CN9 775 aa21.98■■□□□ 1.11
NPAS3-202ENST00000356141 CCT4P50991 539 aaKnown RBP21.97■■□□□ 1.11
NPAS3-202ENST00000356141 ZNF496Q96IT1 587 aaPredicted RBP21.97■■□□□ 1.11
NPAS3-202ENST00000356141 SPG7Q9UQ90 795 aa21.97■■□□□ 1.11
NPAS3-202ENST00000356141 ATP10DQ9P241 1426 aa21.97■■□□□ 1.11
NPAS3-202ENST00000356141 PTCD1O75127 700 aaKnown RBP21.97■■□□□ 1.11
NPAS3-202ENST00000356141 CHMP4BQ9H444 224 aaKnown RBP21.97■■□□□ 1.11
NPAS3-202ENST00000356141 ZNF330Q9Y3S2 320 aaPredicted RBP21.96■■□□□ 1.11
NPAS3-202ENST00000356141 GNAI2P04899 355 aa21.96■■□□□ 1.11
NPAS3-202ENST00000356141 USP44Q9H0E7 712 aa21.96■■□□□ 1.11
NPAS3-202ENST00000356141 IL1RAPL2Q9NP60 686 aa21.96■■□□□ 1.11
NPAS3-202ENST00000356141 DCCP43146 1447 aa21.96■■□□□ 1.11
NPAS3-202ENST00000356141 ADAMTS2O95450 1211 aa21.95■■□□□ 1.1
NPAS3-202ENST00000356141 ZNF790Q6PG37 636 aa21.95■■□□□ 1.1
NPAS3-202ENST00000356141 IFNL2Q8IZJ0 200 aa21.95■■□□□ 1.1
NPAS3-202ENST00000356141 MAP3K2Q9Y2U5 619 aa21.95■■□□□ 1.1
NPAS3-202ENST00000356141 USP16Q9Y5T5 823 aa21.95■■□□□ 1.1
NPAS3-202ENST00000356141 UBTFL1P0CB47 393 aaPredicted RBP21.94■■□□□ 1.1
NPAS3-202ENST00000356141 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
NPAS3-202ENST00000356141 SLKQ9H2G2 1235 aaPredicted RBP21.94■■□□□ 1.1
NPAS3-202ENST00000356141 DCTPP1Q9H773 170 aa21.94■■□□□ 1.1
NPAS3-202ENST00000356141 SLC52A2Q9HAB3 445 aa21.94■■□□□ 1.1
NPAS3-202ENST00000356141 UPF2Q9HAU5 1272 aaKnown RBP21.94■■□□□ 1.1
NPAS3-202ENST00000356141 CABP4P57796 275 aa21.94■■□□□ 1.1
NPAS3-202ENST00000356141 KDM6AO15550 1401 aaPredicted RBP21.94■■□□□ 1.1
NPAS3-202ENST00000356141 BTG4Q9NY30 223 aa21.93■■□□□ 1.1
NPAS3-202ENST00000356141 LRRC37A3O60309 1634 aa21.93■■□□□ 1.1
NPAS3-202ENST00000356141 SRCIN1Q9C0H9 1055 aa21.93■■□□□ 1.1
NPAS3-202ENST00000356141 NUTM2BA6NNL0 878 aaPredicted RBP21.93■■□□□ 1.1
NPAS3-202ENST00000356141 NUTM2EB1AL46 878 aaPredicted RBP21.93■■□□□ 1.1
NPAS3-202ENST00000356141 GSPT1P15170 499 aaKnown RBP21.93■■□□□ 1.1
NPAS3-202ENST00000356141 NUTM2AQ8IVF1 878 aaPredicted RBP21.93■■□□□ 1.1
NPAS3-202ENST00000356141 SOS2Q07890 1332 aaPredicted RBP21.92■■□□□ 1.1
NPAS3-202ENST00000356141 TTC5Q8N0Z6 440 aa21.92■■□□□ 1.1
NPAS3-202ENST00000356141 DNAAF4Q8WXU2 420 aa21.92■■□□□ 1.1
NPAS3-202ENST00000356141 PLEKHM2Q8IWE5 1019 aa21.92■■□□□ 1.1
NPAS3-202ENST00000356141 RPAP2Q8IXW5 612 aaPredicted RBP21.91■■□□□ 1.1
NPAS3-202ENST00000356141 CAMTA1Q9Y6Y1 1673 aa21.9■■□□□ 1.1
NPAS3-202ENST00000356141 PHRF1Q9P1Y6 1649 aaKnown RBP21.9■■□□□ 1.1
NPAS3-202ENST00000356141 DDRGK1Q96HY6 314 aa21.9■■□□□ 1.1
NPAS3-202ENST00000356141 DBF4Q9UBU7 674 aaPredicted RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms