RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 DDX58O95786 925 aaKnown RBP13.69□□□□□ -0.22
NEIL1-201ENST00000355059 FOXD4L5Q5VV16 416 aaPredicted RBP13.69□□□□□ -0.22
NEIL1-201ENST00000355059 FOXD4L4Q8WXT5 416 aaPredicted RBP13.69□□□□□ -0.22
NEIL1-201ENST00000355059 BICDL1Q6ZP65 573 aa13.69□□□□□ -0.22
NEIL1-201ENST00000355059 FAM43AQ8N2R8 423 aa13.68□□□□□ -0.22
NEIL1-201ENST00000355059 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
NEIL1-201ENST00000355059 KCNQ3O43525 872 aa13.68□□□□□ -0.22
NEIL1-201ENST00000355059 NOL8Q76FK4 1167 aaKnown RBP13.68□□□□□ -0.22
NEIL1-201ENST00000355059 PRDM4Q9UKN5 801 aa13.68□□□□□ -0.22
NEIL1-201ENST00000355059 RRP9O43818 475 aaKnown RBP13.68□□□□□ -0.22
NEIL1-201ENST00000355059 TRIM27P14373 513 aa13.68□□□□□ -0.22
NEIL1-201ENST00000355059 CPS1P31327 1500 aa13.67□□□□□ -0.22
NEIL1-201ENST00000355059 RRAGDQ9NQL2 400 aaPredicted RBP13.67□□□□□ -0.22
NEIL1-201ENST00000355059 AKAP4Q5JQC9 854 aa13.67□□□□□ -0.22
NEIL1-201ENST00000355059 MCM4P33991 863 aa13.67□□□□□ -0.22
NEIL1-201ENST00000355059 ZBTB3Q9H5J0 574 aa13.67□□□□□ -0.22
NEIL1-201ENST00000355059 PTCH1Q13635 1447 aa13.66□□□□□ -0.22
NEIL1-201ENST00000355059 USP21Q9UK80 565 aa13.66□□□□□ -0.22
NEIL1-201ENST00000355059 PTMAP06454 111 aaKnown RBP13.66□□□□□ -0.22
NEIL1-201ENST00000355059 DDX49Q9Y6V7 483 aaKnown RBP13.66□□□□□ -0.22
NEIL1-201ENST00000355059 UBTFL1P0CB47 393 aaPredicted RBP13.66□□□□□ -0.22
NEIL1-201ENST00000355059 IL17REQ8NFR9 667 aa13.66□□□□□ -0.22
NEIL1-201ENST00000355059 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.22
NEIL1-201ENST00000355059 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
NEIL1-201ENST00000355059 POLR1AO95602 1720 aaPredicted RBP13.65□□□□□ -0.22
NEIL1-201ENST00000355059 HMMRO75330 724 aa13.65□□□□□ -0.23
NEIL1-201ENST00000355059 CHPF2Q9P2E5 772 aa13.65□□□□□ -0.23
NEIL1-201ENST00000355059 IQGAP1P46940 1657 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 ERBB3P21860 1342 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 ARHGAP23Q9P227 1491 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 MYO3AQ8NEV4 1616 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 RNMTO43148 476 aaKnown RBP13.64□□□□□ -0.23
NEIL1-201ENST00000355059 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 LAMC1P11047 1609 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 INSRP06213 1382 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 ANKARQ7Z5J8 1434 aa13.64□□□□□ -0.23
NEIL1-201ENST00000355059 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
NEIL1-201ENST00000355059 GPTP24298 496 aa13.63□□□□□ -0.23
NEIL1-201ENST00000355059 MAP3K5Q99683 1374 aa13.63□□□□□ -0.23
NEIL1-201ENST00000355059 DIP2AQ14689 1571 aa13.63□□□□□ -0.23
NEIL1-201ENST00000355059 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
NEIL1-201ENST00000355059 PLEKHF1Q96S99 279 aa13.63□□□□□ -0.23
NEIL1-201ENST00000355059 CPSF1Q10570 1443 aaKnown RBP13.63□□□□□ -0.23
NEIL1-201ENST00000355059 MSNP26038 577 aaKnown RBP13.63□□□□□ -0.23
NEIL1-201ENST00000355059 GORABQ5T7V8 394 aa13.63□□□□□ -0.23
NEIL1-201ENST00000355059 CERKQ8TCT0 537 aa13.63□□□□□ -0.23
NEIL1-201ENST00000355059 SIL1Q9H173 461 aa13.63□□□□□ -0.23
NEIL1-201ENST00000355059 KCNQ4P56696 695 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 FMNL2Q96PY5 1086 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 SLIT1O75093 1534 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 PI4KAP2A4QPH2 592 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 FLIIQ13045 1269 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 PI4KAP1Q8N8J0 262 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 FOXD4L6Q3SYB3 417 aaPredicted RBP13.62□□□□□ -0.23
NEIL1-201ENST00000355059 FOXD4L3Q6VB84 417 aaPredicted RBP13.62□□□□□ -0.23
NEIL1-201ENST00000355059 G2E3Q7L622 706 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 SRCIN1Q9C0H9 1055 aa13.62□□□□□ -0.23
NEIL1-201ENST00000355059 VAMP4O75379 141 aa13.61□□□□□ -0.23
NEIL1-201ENST00000355059 PHAXQ9H814 394 aaKnown RBP13.61□□□□□ -0.23
NEIL1-201ENST00000355059 TECPR2O15040 1411 aa13.61□□□□□ -0.23
NEIL1-201ENST00000355059 PHF14O94880 888 aa13.61□□□□□ -0.23
NEIL1-201ENST00000355059 CT47B1P0C2W7 299 aaPredicted RBP13.61□□□□□ -0.23
NEIL1-201ENST00000355059 HSPA1LP34931 641 aa13.61□□□□□ -0.23
NEIL1-201ENST00000355059 AATKQ6ZMQ8 1374 aa13.6□□□□□ -0.23
NEIL1-201ENST00000355059 MYD88Q99836 296 aa13.6□□□□□ -0.23
NEIL1-201ENST00000355059 DLC1Q96QB1 1528 aa13.6□□□□□ -0.23
NEIL1-201ENST00000355059 SURF6O75683 361 aaKnown RBP13.6□□□□□ -0.23
NEIL1-201ENST00000355059 IGSF1Q8N6C5 1336 aa13.59□□□□□ -0.23
NEIL1-201ENST00000355059 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
NEIL1-201ENST00000355059 DNTTIP2Q5QJE6 756 aaKnown RBP13.59□□□□□ -0.23
NEIL1-201ENST00000355059 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
NEIL1-201ENST00000355059 MRE11P49959 708 aa13.59□□□□□ -0.23
NEIL1-201ENST00000355059 TRMT2AQ8IZ69 625 aaKnown RBP13.59□□□□□ -0.23
NEIL1-201ENST00000355059 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
NEIL1-201ENST00000355059 STARD3NLO95772 234 aa13.59□□□□□ -0.23
NEIL1-201ENST00000355059 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
NEIL1-201ENST00000355059 ZNF496Q96IT1 587 aaPredicted RBP13.59□□□□□ -0.23
NEIL1-201ENST00000355059 DCAF5Q96JK2 942 aa13.59□□□□□ -0.23
NEIL1-201ENST00000355059 PPP1R1BQ9UD71 204 aaPredicted RBP13.59□□□□□ -0.23
NEIL1-201ENST00000355059 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.23
NEIL1-201ENST00000355059 COPS6Q7L5N1 327 aa13.58□□□□□ -0.23
NEIL1-201ENST00000355059 ST18O60284 1047 aa13.58□□□□□ -0.24
NEIL1-201ENST00000355059 KCNJ4P48050 445 aa13.58□□□□□ -0.24
NEIL1-201ENST00000355059 XAGE3Q8WTP9 111 aa13.58□□□□□ -0.24
NEIL1-201ENST00000355059 KIAA1210Q9ULL0 1709 aa13.58□□□□□ -0.24
NEIL1-201ENST00000355059 CDC45O75419 566 aa13.58□□□□□ -0.24
NEIL1-201ENST00000355059 PTMSP20962 102 aa13.58□□□□□ -0.24
NEIL1-201ENST00000355059 DBF4Q9UBU7 674 aaPredicted RBP13.58□□□□□ -0.24
NEIL1-201ENST00000355059 EXOC6BQ9Y2D4 811 aa13.58□□□□□ -0.24
NEIL1-201ENST00000355059 VGLL3A8MV65 326 aa13.57□□□□□ -0.24
NEIL1-201ENST00000355059 A1BGP04217 495 aa13.57□□□□□ -0.24
NEIL1-201ENST00000355059 MCCP23508 829 aa13.57□□□□□ -0.24
NEIL1-201ENST00000355059 MCTP1Q6DN14 999 aa13.57□□□□□ -0.24
NEIL1-201ENST00000355059 TBC1D2BQ9UPU7 963 aa13.57□□□□□ -0.24
NEIL1-201ENST00000355059 SNRPA1P09661 255 aaKnown RBP13.57□□□□□ -0.24
NEIL1-201ENST00000355059 ATP6V1AP38606 617 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms