RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 TBC1D2Q9BYX2 928 aa4.59□□□□□ -1.68
RNF38-203ENST00000353739 OSBPL3Q9H4L5 887 aa4.59□□□□□ -1.68
RNF38-203ENST00000353739 ALS2Q96Q42 1657 aa4.59□□□□□ -1.68
RNF38-203ENST00000353739 HSP90AA1P07900 732 aaKnown RBP4.58□□□□□ -1.68
RNF38-203ENST00000353739 SKAP1Q86WV1 359 aa4.58□□□□□ -1.68
RNF38-203ENST00000353739 ERC1Q8IUD2 1116 aa4.58□□□□□ -1.68
RNF38-203ENST00000353739 GPATCH3Q96I76 525 aa4.58□□□□□ -1.68
RNF38-203ENST00000353739 CWC22Q9HCG8 908 aaKnown RBP4.58□□□□□ -1.68
RNF38-203ENST00000353739 LRRCC1Q9C099 1032 aa4.58□□□□□ -1.68
RNF38-203ENST00000353739 K7ELQ4 463 aaPredicted RBP4.58□□□□□ -1.68
RNF38-203ENST00000353739 DDX58O95786 925 aaKnown RBP4.58□□□□□ -1.68
RNF38-203ENST00000353739 FLIIQ13045 1269 aa4.58□□□□□ -1.68
RNF38-203ENST00000353739 ESCO1Q5FWF5 840 aa4.58□□□□□ -1.68
RNF38-203ENST00000353739 PARP4Q9UKK3 1724 aaKnown RBP4.58□□□□□ -1.68
RNF38-203ENST00000353739 ELL2O00472 640 aaPredicted RBP4.58□□□□□ -1.68
RNF38-203ENST00000353739 TEFQ10587 303 aa4.58□□□□□ -1.68
RNF38-203ENST00000353739 DCTN1Q14203 1278 aa4.58□□□□□ -1.68
RNF38-203ENST00000353739 SETD1BQ9UPS6 1966 aaKnown RBP4.58□□□□□ -1.68
RNF38-203ENST00000353739 NUTM2FA1L443 756 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 ERC2O15083 957 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 ALDH1L1O75891 902 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 UBTFL1P0CB47 393 aaPredicted RBP4.57□□□□□ -1.68
RNF38-203ENST00000353739 FBLN1P23142 703 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 ATP8B2P98198 1209 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 FKBP5Q13451 457 aaPredicted RBP4.57□□□□□ -1.68
RNF38-203ENST00000353739 TBC1D9Q6ZT07 1266 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 PLEKHM2Q8IWE5 1019 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 NUCB2P80303 420 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 SPG7Q9UQ90 795 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 C1orf167Q5SNV9 1468 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 SEC24BO95487 1268 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 ANAPC15P60006 121 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 HDGFL1Q5TGJ6 251 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 C1orf115Q9H7X2 142 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 SIPA1L3O60292 1781 aaPredicted RBP4.57□□□□□ -1.68
RNF38-203ENST00000353739 ANTXR1Q9H6X2 564 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 HYPKQ9NX55 129 aa4.57□□□□□ -1.68
RNF38-203ENST00000353739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.57□□□□□ -1.68
RNF38-203ENST00000353739 SOX12O15370 315 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 ATF3P18847 181 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 MRC1P22897 1456 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 PKD1L3Q7Z443 1732 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 LAMB4A4D0S4 1761 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 BTBD11A6QL63 1104 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 HIP1O00291 1037 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 SLC4A10Q6U841 1118 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 C19orf44Q9H6X5 657 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 PDIA4P13667 645 aaKnown RBP4.56□□□□□ -1.68
RNF38-203ENST00000353739 SLC4A3P48751 1232 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 ZNF530Q6P9A1 599 aaPredicted RBP4.56□□□□□ -1.68
RNF38-203ENST00000353739 PROSER2Q86WR7 435 aaPredicted RBP4.56□□□□□ -1.68
RNF38-203ENST00000353739 DBF4Q9UBU7 674 aaPredicted RBP4.56□□□□□ -1.68
RNF38-203ENST00000353739 STAP2Q9UGK3 403 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 TNS3Q68CZ2 1445 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 SIRT2Q8IXJ6 389 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 KLHL34Q8N239 644 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 TTC41PQ6P2S7 1318 aa4.56□□□□□ -1.68
RNF38-203ENST00000353739 RNMTO43148 476 aaKnown RBP4.55□□□□□ -1.68
RNF38-203ENST00000353739 TATP17735 454 aaPredicted RBP4.55□□□□□ -1.68
RNF38-203ENST00000353739 MX1P20591 662 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 KRT28Q7Z3Y7 464 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 ARHGEF25Q86VW2 580 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 ANKRD24Q8TF21 1146 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 RUFY2Q8WXA3 655 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 NPHP3Q7Z494 1330 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 EIF4A1P60842 406 aaKnown RBP4.55□□□□□ -1.68
RNF38-203ENST00000353739 TICAM2Q86XR7 235 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 CNTROBQ8N137 903 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 KIF1BPQ96EK5 621 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 MEIS3Q99687 375 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 SLKQ9H2G2 1235 aaPredicted RBP4.55□□□□□ -1.68
RNF38-203ENST00000353739 MCM4P33991 863 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 DNAAF4Q8WXU2 420 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 CRYBG1Q9Y4K1 1723 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 USP42Q9H9J4 1324 aaKnown RBP4.55□□□□□ -1.68
RNF38-203ENST00000353739 GOLGA6L3A6NEY3 463 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 FRAT2O75474 233 aaPredicted RBP4.55□□□□□ -1.68
RNF38-203ENST00000353739 RAB3GAP1Q15042 981 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 RAPGEF4Q8WZA2 1011 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 IL17RAQ96F46 866 aa4.55□□□□□ -1.68
RNF38-203ENST00000353739 FOXO3O43524 673 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 GCP02774 474 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 GSPT1P15170 499 aaKnown RBP4.54□□□□□ -1.68
RNF38-203ENST00000353739 PDE1AP54750 535 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 POLA2Q14181 598 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 CADPS2Q86UW7 1296 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 IL17REQ8NFR9 667 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 SSH3Q8TE77 659 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 LTV1Q96GA3 475 aaPredicted RBP4.54□□□□□ -1.68
RNF38-203ENST00000353739 USP26Q9BXU7 913 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 TUBGCP6Q96RT7 1819 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 SCN11AQ9UI33 1791 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 CPDO75976 1380 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 ERBB4Q15303 1308 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 NEXNQ0ZGT2 675 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 CLEC17AQ6ZS10 378 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 BCL11AQ9H165 835 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 SDSP20132 328 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 DDIT3P35638 169 aa4.54□□□□□ -1.68
RNF38-203ENST00000353739 ANP32BQ92688 251 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms