RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 C8orf58Q8NAV2 365 aa20.43■□□□□ 0.86
ARFGAP1-201ENST00000353546 USP25Q9UHP3 1055 aa20.43■□□□□ 0.86
ARFGAP1-201ENST00000353546 KIF20BQ96Q89 1820 aa20.42■□□□□ 0.86
ARFGAP1-201ENST00000353546 SOX12O15370 315 aa20.42■□□□□ 0.86
ARFGAP1-201ENST00000353546 CCDC66A2RUB6 948 aa20.42■□□□□ 0.86
ARFGAP1-201ENST00000353546 ZNF853P0CG23 659 aa20.42■□□□□ 0.86
ARFGAP1-201ENST00000353546 TRIM6-TRIM34B2RNG4 842 aa20.41■□□□□ 0.86
ARFGAP1-201ENST00000353546 GSPT1P15170 499 aaKnown RBP20.41■□□□□ 0.86
ARFGAP1-201ENST00000353546 TRIM34Q9BYJ4 488 aa20.41■□□□□ 0.86
ARFGAP1-201ENST00000353546 NCBP1Q09161 790 aaKnown RBP20.41■□□□□ 0.86
ARFGAP1-201ENST00000353546 TERF2Q15554 542 aa20.41■□□□□ 0.86
ARFGAP1-201ENST00000353546 FOXD4L5Q5VV16 416 aaPredicted RBP20.41■□□□□ 0.86
ARFGAP1-201ENST00000353546 FOXD4L4Q8WXT5 416 aaPredicted RBP20.41■□□□□ 0.86
ARFGAP1-201ENST00000353546 ZBTB9Q96C00 473 aa20.41■□□□□ 0.86
ARFGAP1-201ENST00000353546 DIP2CQ9Y2E4 1556 aa20.41■□□□□ 0.86
ARFGAP1-201ENST00000353546 TXNDC2Q86VQ3 553 aa20.4■□□□□ 0.86
ARFGAP1-201ENST00000353546 TMEM131LA2VDJ0 1609 aa20.4■□□□□ 0.86
ARFGAP1-201ENST00000353546 DIAPH3Q9NSV4 1193 aa20.4■□□□□ 0.86
ARFGAP1-201ENST00000353546 TULP2O00295 520 aa20.4■□□□□ 0.86
ARFGAP1-201ENST00000353546 CHRM1P11229 460 aaPredicted RBP20.4■□□□□ 0.86
ARFGAP1-201ENST00000353546 IL13P35225 146 aa20.4■□□□□ 0.86
ARFGAP1-201ENST00000353546 PLEKHM2Q8IWE5 1019 aa20.4■□□□□ 0.86
ARFGAP1-201ENST00000353546 API5Q9BZZ5 524 aaKnown RBP20.4■□□□□ 0.86
ARFGAP1-201ENST00000353546 ERICH4A6NGS2 130 aa20.39■□□□□ 0.85
ARFGAP1-201ENST00000353546 DDX41Q9UJV9 622 aaKnown RBP20.39■□□□□ 0.85
ARFGAP1-201ENST00000353546 KRT24Q2M2I5 525 aa20.39■□□□□ 0.85
ARFGAP1-201ENST00000353546 CFAP44Q96MT7 982 aa20.39■□□□□ 0.85
ARFGAP1-201ENST00000353546 APBB1O00213 710 aa20.38■□□□□ 0.85
ARFGAP1-201ENST00000353546 TRERF1Q96PN7 1200 aa20.38■□□□□ 0.85
ARFGAP1-201ENST00000353546 MAP2P11137 1827 aaKnown RBP20.38■□□□□ 0.85
ARFGAP1-201ENST00000353546 ADCY5O95622 1261 aa20.37■□□□□ 0.85
ARFGAP1-201ENST00000353546 C16orf71Q8IYS4 520 aaPredicted RBP20.37■□□□□ 0.85
ARFGAP1-201ENST00000353546 ALKQ9UM73 1620 aa20.37■□□□□ 0.85
ARFGAP1-201ENST00000353546 CHAF1AQ13111 956 aaPredicted RBP20.37■□□□□ 0.85
ARFGAP1-201ENST00000353546 KLHL34Q8N239 644 aa20.36■□□□□ 0.85
ARFGAP1-201ENST00000353546 PYCARDQ9ULZ3 195 aa20.36■□□□□ 0.85
ARFGAP1-201ENST00000353546 NAA30Q147X3 362 aaPredicted RBP20.36■□□□□ 0.85
ARFGAP1-201ENST00000353546 DCTPP1Q9H773 170 aa20.36■□□□□ 0.85
ARFGAP1-201ENST00000353546 RABEP1Q15276 862 aa20.35■□□□□ 0.85
ARFGAP1-201ENST00000353546 KIAA1524Q8TCG1 905 aa20.35■□□□□ 0.85
ARFGAP1-201ENST00000353546 MBD3O95983 291 aa20.34■□□□□ 0.85
ARFGAP1-201ENST00000353546 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
ARFGAP1-201ENST00000353546 TTC22Q5TAA0 569 aa20.34■□□□□ 0.85
ARFGAP1-201ENST00000353546 PREX1Q8TCU6 1659 aa20.34■□□□□ 0.85
ARFGAP1-201ENST00000353546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.34■□□□□ 0.85
ARFGAP1-201ENST00000353546 NEO1Q92859 1461 aa20.34■□□□□ 0.85
ARFGAP1-201ENST00000353546 MORC2Q9Y6X9 1032 aaPredicted RBP20.34■□□□□ 0.85
ARFGAP1-201ENST00000353546 ATP7BP35670 1465 aa20.33■□□□□ 0.84
ARFGAP1-201ENST00000353546 OTUD7AQ8TE49 926 aaPredicted RBP20.33■□□□□ 0.84
ARFGAP1-201ENST00000353546 USP26Q9BXU7 913 aa20.33■□□□□ 0.84
ARFGAP1-201ENST00000353546 KCNF1Q9H3M0 494 aa20.33■□□□□ 0.84
ARFGAP1-201ENST00000353546 FAM69CQ0P6D2 419 aa20.32■□□□□ 0.84
ARFGAP1-201ENST00000353546 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
ARFGAP1-201ENST00000353546 CWC22Q9HCG8 908 aaKnown RBP20.32■□□□□ 0.84
ARFGAP1-201ENST00000353546 RIMS2Q9UQ26 1411 aa20.32■□□□□ 0.84
ARFGAP1-201ENST00000353546 KNDC1Q76NI1 1749 aa20.31■□□□□ 0.84
ARFGAP1-201ENST00000353546 CHMP4CQ96CF2 233 aa20.31■□□□□ 0.84
ARFGAP1-201ENST00000353546 CALCOCO1Q9P1Z2 691 aa20.31■□□□□ 0.84
ARFGAP1-201ENST00000353546 REREQ9P2R6 1566 aa20.31■□□□□ 0.84
ARFGAP1-201ENST00000353546 KIF18AQ8NI77 898 aa20.3■□□□□ 0.84
ARFGAP1-201ENST00000353546 INTS3Q68E01 1043 aaKnown RBP20.3■□□□□ 0.84
ARFGAP1-201ENST00000353546 ANKRD44Q8N8A2 993 aa20.29■□□□□ 0.84
ARFGAP1-201ENST00000353546 MIS18AQ9NYP9 233 aa20.29■□□□□ 0.84
ARFGAP1-201ENST00000353546 CDK12Q9NYV4 1490 aaPredicted RBP20.29■□□□□ 0.84
ARFGAP1-201ENST00000353546 SMARCA5O60264 1052 aaPredicted RBP20.29■□□□□ 0.84
ARFGAP1-201ENST00000353546 KIF24Q5T7B8 1368 aa20.28■□□□□ 0.84
ARFGAP1-201ENST00000353546 DLG5Q8TDM6 1919 aa20.28■□□□□ 0.84
ARFGAP1-201ENST00000353546 UVSSAQ2YD98 709 aa20.28■□□□□ 0.84
ARFGAP1-201ENST00000353546 COG3Q96JB2 828 aa20.28■□□□□ 0.84
ARFGAP1-201ENST00000353546 SDSP20132 328 aa20.28■□□□□ 0.84
ARFGAP1-201ENST00000353546 EDC4Q6P2E9 1401 aaKnown RBP20.28■□□□□ 0.84
ARFGAP1-201ENST00000353546 MCM10Q7L590 875 aa20.27■□□□□ 0.84
ARFGAP1-201ENST00000353546 ST7Q9NRC1 585 aa20.27■□□□□ 0.84
ARFGAP1-201ENST00000353546 FEZ2Q9UHY8 353 aaPredicted RBP20.27■□□□□ 0.84
ARFGAP1-201ENST00000353546 PLCB2Q00722 1185 aa20.27■□□□□ 0.83
ARFGAP1-201ENST00000353546 NUDT16Q96DE0 195 aaKnown RBP20.27■□□□□ 0.83
ARFGAP1-201ENST00000353546 CPSF1Q10570 1443 aaKnown RBP20.26■□□□□ 0.83
ARFGAP1-201ENST00000353546 GADD45BO75293 160 aaPredicted RBP20.26■□□□□ 0.83
ARFGAP1-201ENST00000353546 HCLS1P14317 486 aaPredicted RBP20.26■□□□□ 0.83
ARFGAP1-201ENST00000353546 CEP85Q6P2H3 762 aa20.26■□□□□ 0.83
ARFGAP1-201ENST00000353546 RPAP2Q8IXW5 612 aaPredicted RBP20.26■□□□□ 0.83
ARFGAP1-201ENST00000353546 KRT222Q8N1A0 295 aa20.26■□□□□ 0.83
ARFGAP1-201ENST00000353546 WASLO00401 505 aaPredicted RBP20.26■□□□□ 0.83
ARFGAP1-201ENST00000353546 ATP10DQ9P241 1426 aa20.25■□□□□ 0.83
ARFGAP1-201ENST00000353546 AATKQ6ZMQ8 1374 aa20.25■□□□□ 0.83
ARFGAP1-201ENST00000353546 FAM184AQ8NB25 1140 aa20.25■□□□□ 0.83
ARFGAP1-201ENST00000353546 GDPD2Q9HCC8 539 aa20.25■□□□□ 0.83
ARFGAP1-201ENST00000353546 FOXD4L6Q3SYB3 417 aaPredicted RBP20.25■□□□□ 0.83
ARFGAP1-201ENST00000353546 CASC1Q6TDU7 716 aa20.25■□□□□ 0.83
ARFGAP1-201ENST00000353546 FOXD4L3Q6VB84 417 aaPredicted RBP20.25■□□□□ 0.83
ARFGAP1-201ENST00000353546 RICTORQ6R327 1708 aa20.25■□□□□ 0.83
ARFGAP1-201ENST00000353546 METP08581 1390 aa20.25■□□□□ 0.83
ARFGAP1-201ENST00000353546 SYAP1Q96A49 352 aaPredicted RBP20.24■□□□□ 0.83
ARFGAP1-201ENST00000353546 SULT6B1Q6IMI4 303 aa20.24■□□□□ 0.83
ARFGAP1-201ENST00000353546 TSPOAP1O95153 1857 aa20.24■□□□□ 0.83
ARFGAP1-201ENST00000353546 AP5Z1O43299 807 aa20.23■□□□□ 0.83
ARFGAP1-201ENST00000353546 ST18O60284 1047 aa20.23■□□□□ 0.83
ARFGAP1-201ENST00000353546 SYCP1Q15431 976 aa20.23■□□□□ 0.83
ARFGAP1-201ENST00000353546 SPC24Q8NBT2 197 aa20.23■□□□□ 0.83
ARFGAP1-201ENST00000353546 MEIS3Q99687 375 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms