RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 CCDC73Q6ZRK6 1079 aa16.97■□□□□ 0.31
SPPL3-201ENST00000353487 RPAP2Q8IXW5 612 aaPredicted RBP16.97■□□□□ 0.31
SPPL3-201ENST00000353487 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
SPPL3-201ENST00000353487 CT47A1Q5JQC4 288 aaPredicted RBP16.97■□□□□ 0.31
SPPL3-201ENST00000353487 UHRF1BP1Q6BDS2 1440 aa16.96■□□□□ 0.31
SPPL3-201ENST00000353487 GNAI2P04899 355 aa16.96■□□□□ 0.31
SPPL3-201ENST00000353487 TDO2P48775 406 aa16.96■□□□□ 0.31
SPPL3-201ENST00000353487 TERF1P54274 439 aa16.96■□□□□ 0.31
SPPL3-201ENST00000353487 ZSWIM4Q9H7M6 989 aa16.96■□□□□ 0.31
SPPL3-201ENST00000353487 IFIT2P09913 472 aaKnown RBP16.96■□□□□ 0.31
SPPL3-201ENST00000353487 UBTFL1P0CB47 393 aaPredicted RBP16.96■□□□□ 0.31
SPPL3-201ENST00000353487 RASSF4Q9H2L5 321 aa16.96■□□□□ 0.31
SPPL3-201ENST00000353487 NSFL1CQ9UNZ2 370 aaKnown RBP16.96■□□□□ 0.31
SPPL3-201ENST00000353487 KDM4AO75164 1064 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 DNAAF4Q8WXU2 420 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 KIAA0754O94854 1291 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 CDR1P51861 262 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 SULT6B1Q6IMI4 303 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 KIF18AQ8NI77 898 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 PRAM1Q96QH2 718 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 HDAC5Q9UQL6 1122 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 MCM10Q7L590 875 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 SPATA32Q96LK8 384 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 CLIP2Q9UDT6 1046 aa16.95■□□□□ 0.3
SPPL3-201ENST00000353487 NFE2L2Q16236 605 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 USP8P40818 1118 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 AMPHP49418 695 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 MEIS3Q99687 375 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 ABCA8O94911 1581 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 PIK3C2GO75747 1445 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 PPFIA3O75145 1194 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 MX1P20591 662 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 BANK1Q8NDB2 785 aa16.94■□□□□ 0.3
SPPL3-201ENST00000353487 STX6O43752 255 aa16.93■□□□□ 0.3
SPPL3-201ENST00000353487 FCHSD2O94868 740 aa16.93■□□□□ 0.3
SPPL3-201ENST00000353487 PIBF1Q8WXW3 757 aa16.93■□□□□ 0.3
SPPL3-201ENST00000353487 A2MP01023 1474 aa16.93■□□□□ 0.3
SPPL3-201ENST00000353487 BMS1Q14692 1282 aaKnown RBP16.93■□□□□ 0.3
SPPL3-201ENST00000353487 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
SPPL3-201ENST00000353487 DDX11Q96FC9 970 aa16.93■□□□□ 0.3
SPPL3-201ENST00000353487 MBIPQ9NS73 344 aa16.93■□□□□ 0.3
SPPL3-201ENST00000353487 OGFRQ9NZT2 677 aa16.93■□□□□ 0.3
SPPL3-201ENST00000353487 SCAF11Q99590 1463 aaKnown RBP16.92■□□□□ 0.3
SPPL3-201ENST00000353487 CNTROBQ8N137 903 aa16.92■□□□□ 0.3
SPPL3-201ENST00000353487 ZBTB7BO15156 539 aaPredicted RBP16.92■□□□□ 0.3
SPPL3-201ENST00000353487 PLCH2O75038 1416 aa16.92■□□□□ 0.3
SPPL3-201ENST00000353487 DNM1Q05193 864 aaKnown RBP16.92■□□□□ 0.3
SPPL3-201ENST00000353487 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
SPPL3-201ENST00000353487 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
SPPL3-201ENST00000353487 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
SPPL3-201ENST00000353487 PDRG1Q9NUG6 133 aa16.92■□□□□ 0.3
SPPL3-201ENST00000353487 KINO60870 393 aaKnown RBP16.91■□□□□ 0.3
SPPL3-201ENST00000353487 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
SPPL3-201ENST00000353487 KDM5CP41229 1560 aa16.91■□□□□ 0.3
SPPL3-201ENST00000353487 UBE2HP62256 183 aa16.91■□□□□ 0.3
SPPL3-201ENST00000353487 TCEANC2Q96MN5 208 aa16.91■□□□□ 0.3
SPPL3-201ENST00000353487 EMILIN1Q9Y6C2 1016 aa16.91■□□□□ 0.3
SPPL3-201ENST00000353487 UVSSAQ2YD98 709 aa16.9■□□□□ 0.3
SPPL3-201ENST00000353487 NECAB1Q8N987 351 aa16.9■□□□□ 0.3
SPPL3-201ENST00000353487 PRPF40BQ6NWY9 871 aaKnown RBP16.9■□□□□ 0.3
SPPL3-201ENST00000353487 LUZP1Q86V48 1076 aa16.9■□□□□ 0.3
SPPL3-201ENST00000353487 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
SPPL3-201ENST00000353487 CPA1P15085 419 aa16.89■□□□□ 0.3
SPPL3-201ENST00000353487 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.3
SPPL3-201ENST00000353487 CCDC70Q6NSX1 233 aa16.89■□□□□ 0.3
SPPL3-201ENST00000353487 LRRFIP2Q9Y608 721 aaKnown RBP16.89■□□□□ 0.3
SPPL3-201ENST00000353487 GNAI3P08754 354 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 GSPT1P15170 499 aaKnown RBP16.89■□□□□ 0.29
SPPL3-201ENST00000353487 ZNF165P49910 485 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 CHMP4CQ96CF2 233 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 SAMD9LQ8IVG5 1584 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 KRBA2Q6ZNG9 492 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 MICALL1Q8N3F8 863 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 CCDC34Q96HJ3 373 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 SHANK2Q9UPX8 1470 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 GJB2P29033 226 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 CEP135Q66GS9 1140 aa16.89■□□□□ 0.29
SPPL3-201ENST00000353487 PLA2R1Q13018 1463 aa16.88■□□□□ 0.29
SPPL3-201ENST00000353487 PHACTR2O75167 634 aa16.88■□□□□ 0.29
SPPL3-201ENST00000353487 BRPF1P55201 1214 aaPredicted RBP16.88■□□□□ 0.29
SPPL3-201ENST00000353487 FAM173BQ6P4H8 233 aa16.88■□□□□ 0.29
SPPL3-201ENST00000353487 CDC42BPAQ5VT25 1732 aa16.88■□□□□ 0.29
SPPL3-201ENST00000353487 MCM6Q14566 821 aa16.88■□□□□ 0.29
SPPL3-201ENST00000353487 MRPL50Q8N5N7 158 aaKnown RBP16.88■□□□□ 0.29
SPPL3-201ENST00000353487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.87■□□□□ 0.293e-6■■■■■ 27.6
SPPL3-201ENST00000353487 PDCP20941 246 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 ME1P48163 572 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 PDE1AP54750 535 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 RNF20Q5VTR2 975 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 STK11IPQ8N1F8 1099 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 VAMP4O75379 141 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
SPPL3-201ENST00000353487 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
SPPL3-201ENST00000353487 TTC31Q49AM3 519 aaPredicted RBP16.87■□□□□ 0.29
SPPL3-201ENST00000353487 ANO6Q4KMQ2 910 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 CLASRPQ8N2M8 674 aaKnown RBP16.87■□□□□ 0.29
SPPL3-201ENST00000353487 CAGE1Q8TC20 777 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 FEZ1Q99689 392 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms