RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 NCOA1Q15788 1441 aa13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 NAPBQ9H115 298 aa13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 FIBPO43427 364 aa13.25□□□□□ -0.29
SLC6A20-201ENST00000353278 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
SLC6A20-201ENST00000353278 EXOC6BQ9Y2D4 811 aa13.25□□□□□ -0.29
SLC6A20-201ENST00000353278 GSE1Q14687 1217 aa13.25□□□□□ -0.29
SLC6A20-201ENST00000353278 ZNF444Q8N0Y2 327 aaPredicted RBP13.25□□□□□ -0.29
SLC6A20-201ENST00000353278 ZSCAN31Q96LW9 406 aaPredicted RBP13.25□□□□□ -0.29
SLC6A20-201ENST00000353278 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 RUFY1Q96T51 708 aa13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 DACH1Q9UI36 760 aa13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 ME1P48163 572 aa13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 JAKMIP1Q96N16 626 aaKnown RBP13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 TTC21AQ8NDW8 1320 aa13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 DDB1Q16531 1140 aa13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 ZCRB1Q8TBF4 217 aaKnown RBP13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 ZNHIT6Q9NWK9 470 aaKnown RBP13.24□□□□□ -0.29
SLC6A20-201ENST00000353278 MNS1Q8NEH6 495 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 LUC7LQ9NQ29 371 aaKnown RBP13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 NSD2O96028 1365 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 SNRPA1P09661 255 aaKnown RBP13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 TRIM21P19474 475 aaKnown RBP13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 LARP1BQ659C4 914 aaKnown RBP13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 PDRG1Q9NUG6 133 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 FEZ1Q99689 392 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 MYO6Q9UM54 1294 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 BICRAQ9NZM4 1560 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 CCDC96Q2M329 555 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 IQCA1Q86XH1 822 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 PIBF1Q8WXW3 757 aa13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 CWC25Q9NXE8 425 aaPredicted RBP13.23□□□□□ -0.29
SLC6A20-201ENST00000353278 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 MYO1BO43795 1136 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 MATR3P43243 847 aaKnown RBP eCLIP13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 KRT85P78386 507 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 TMEM57Q8N5G2 664 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 CTCFLQ8NI51 663 aaPredicted RBP13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 SCLT1Q96NL6 688 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 LDHAL6AQ6ZMR3 332 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 SMC2O95347 1197 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 RNF41Q9H4P4 317 aaPredicted RBP13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 PCF11O94913 1555 aaKnown RBP13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 POLD1P28340 1107 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 TNNT3P45378 269 aaPredicted RBP13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 TRIM5Q9C035 493 aa13.22□□□□□ -0.29
SLC6A20-201ENST00000353278 CAGE1Q8TC20 777 aa13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 TANGO6Q9C0B7 1094 aa13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 DESP17661 470 aa13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 HSPA2P54652 639 aa13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 PPP4R3AQ6IN85 833 aa13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 BAG3O95817 575 aa13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 CUL5Q93034 780 aa13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 LRRC59Q96AG4 307 aaKnown RBP13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 BOLA2Q9H3K6 86 aa13.21□□□□□ -0.29
SLC6A20-201ENST00000353278 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.3
SLC6A20-201ENST00000353278 CABP5Q9NP86 173 aa13.21□□□□□ -0.3
SLC6A20-201ENST00000353278 SCAF11Q99590 1463 aaKnown RBP13.2□□□□□ -0.3
SLC6A20-201ENST00000353278 CHMP4BP1P59074 171 aa13.2□□□□□ -0.3
SLC6A20-201ENST00000353278 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
SLC6A20-201ENST00000353278 DNAI2Q9GZS0 605 aa13.2□□□□□ -0.3
SLC6A20-201ENST00000353278 MX1P20591 662 aa13.2□□□□□ -0.3
SLC6A20-201ENST00000353278 ACBD3Q9H3P7 528 aa13.2□□□□□ -0.3
SLC6A20-201ENST00000353278 RANBP6O60518 1105 aaKnown RBP13.2□□□□□ -0.3
SLC6A20-201ENST00000353278 PTPN23Q9H3S7 1636 aa13.2□□□□□ -0.3
SLC6A20-201ENST00000353278 HLA-DOAP06340 250 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 SETDB2Q96T68 719 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 EHMT1Q9H9B1 1298 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 FLIIQ13045 1269 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 CEP131Q9UPN4 1083 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 CCDC152Q4G0S7 254 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 CFAP45Q9UL16 551 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 LMTK3Q96Q04 1460 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 PLCH2O75038 1416 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 ATP6V1AP38606 617 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
SLC6A20-201ENST00000353278 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
SLC6A20-201ENST00000353278 TTF1Q15361 905 aaPredicted RBP13.18□□□□□ -0.3
SLC6A20-201ENST00000353278 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
SLC6A20-201ENST00000353278 TXLNBQ8N3L3 684 aa13.18□□□□□ -0.3
SLC6A20-201ENST00000353278 A2MP01023 1474 aa13.18□□□□□ -0.3
SLC6A20-201ENST00000353278 SSH1Q8WYL5 1049 aa13.18□□□□□ -0.3
SLC6A20-201ENST00000353278 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
SLC6A20-201ENST00000353278 F6X3S4 739 aa13.18□□□□□ -0.3
SLC6A20-201ENST00000353278 HDAC9Q9UKV0 1011 aa13.18□□□□□ -0.3
SLC6A20-201ENST00000353278 PTPRCP08575 1304 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms