RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 GNAI2P04899 355 aa30.07■■■□□ 2.4
CPNE1-202ENST00000352393 IGSF1Q8N6C5 1336 aa30.06■■■□□ 2.4
CPNE1-202ENST00000352393 CACNA1FO60840 1977 aa30.06■■■□□ 2.4
CPNE1-202ENST00000352393 PIK3C2AO00443 1686 aa30.06■■■□□ 2.4
CPNE1-202ENST00000352393 ZDHHC9Q9Y397 364 aa30.06■■■□□ 2.4
CPNE1-202ENST00000352393 SOX12O15370 315 aa30.05■■■□□ 2.4
CPNE1-202ENST00000352393 ZSCAN23Q3MJ62 389 aa30.04■■■□□ 2.4
CPNE1-202ENST00000352393 CAVIN1Q6NZI2 390 aaKnown RBP30.03■■■□□ 2.4
CPNE1-202ENST00000352393 EXOC6BQ9Y2D4 811 aa30.02■■■□□ 2.4
CPNE1-202ENST00000352393 RGPD8O14715 1765 aaPredicted RBP30.02■■■□□ 2.4
CPNE1-202ENST00000352393 LTKP29376 864 aa30.01■■■□□ 2.39
CPNE1-202ENST00000352393 STK31Q9BXU1 1019 aa30.01■■■□□ 2.39
CPNE1-202ENST00000352393 EYA1Q99502 592 aa30.01■■■□□ 2.39
CPNE1-202ENST00000352393 ESYT1Q9BSJ8 1104 aa30.01■■■□□ 2.39
CPNE1-202ENST00000352393 LRRCC1Q9C099 1032 aa30■■■□□ 2.39
CPNE1-202ENST00000352393 PXDNLA1KZ92 1463 aa30■■■□□ 2.39
CPNE1-202ENST00000352393 DIP2AQ14689 1571 aa30■■■□□ 2.39
CPNE1-202ENST00000352393 HTATSF1O43719 755 aaKnown RBP29.99■■■□□ 2.39
CPNE1-202ENST00000352393 GNAI3P08754 354 aa29.99■■■□□ 2.39
CPNE1-202ENST00000352393 FLIIQ13045 1269 aa29.99■■■□□ 2.39
CPNE1-202ENST00000352393 MARF1Q9Y4F3 1742 aaKnown RBP29.98■■■□□ 2.39
CPNE1-202ENST00000352393 MX1P20591 662 aa29.98■■■□□ 2.39
CPNE1-202ENST00000352393 GPT2Q8TD30 523 aa29.98■■■□□ 2.39
CPNE1-202ENST00000352393 ANP32BQ92688 251 aaKnown RBP29.98■■■□□ 2.39
CPNE1-202ENST00000352393 NWD1Q149M9 1564 aa29.97■■■□□ 2.39
CPNE1-202ENST00000352393 NCLP19338 710 aaKnown RBP29.97■■■□□ 2.39
CPNE1-202ENST00000352393 TSHZ3Q63HK5 1081 aa29.97■■■□□ 2.39
CPNE1-202ENST00000352393 MCM2P49736 904 aa29.96■■■□□ 2.39
CPNE1-202ENST00000352393 TMX3Q96JJ7 454 aa29.96■■■□□ 2.39
CPNE1-202ENST00000352393 USP54Q70EL1 1684 aa29.96■■■□□ 2.39
CPNE1-202ENST00000352393 PNMA6EA0A0J9YXQ4 647 aa29.96■■■□□ 2.39
CPNE1-202ENST00000352393 PRPF40AO75400 957 aaKnown RBP29.96■■■□□ 2.39
CPNE1-202ENST00000352393 NEK4P51957 841 aa29.96■■■□□ 2.39
CPNE1-202ENST00000352393 ATP8B2P98198 1209 aa29.96■■■□□ 2.39
CPNE1-202ENST00000352393 CCDC30Q5VVM6 783 aa29.96■■■□□ 2.39
CPNE1-202ENST00000352393 IL17RAQ96F46 866 aa29.95■■■□□ 2.38
CPNE1-202ENST00000352393 STAP2Q9UGK3 403 aa29.95■■■□□ 2.38
CPNE1-202ENST00000352393 SOS1Q07889 1333 aaPredicted RBP29.94■■■□□ 2.38
CPNE1-202ENST00000352393 ANAPC15P60006 121 aa29.94■■■□□ 2.38
CPNE1-202ENST00000352393 FKBP5Q13451 457 aaPredicted RBP29.94■■■□□ 2.38
CPNE1-202ENST00000352393 CUL4AQ13619 759 aa29.94■■■□□ 2.38
CPNE1-202ENST00000352393 AMPHP49418 695 aa29.93■■■□□ 2.38
CPNE1-202ENST00000352393 ZSCAN30Q86W11 494 aa29.93■■■□□ 2.38
CPNE1-202ENST00000352393 CHMLP26374 656 aa29.93■■■□□ 2.38
CPNE1-202ENST00000352393 UBE2Q2Q8WVN8 375 aa29.93■■■□□ 2.38
CPNE1-202ENST00000352393 MCCP23508 829 aa29.92■■■□□ 2.38
CPNE1-202ENST00000352393 RBSNQ9H1K0 784 aa29.92■■■□□ 2.38
CPNE1-202ENST00000352393 PALD1Q9ULE6 856 aa29.92■■■□□ 2.38
CPNE1-202ENST00000352393 AOX1Q06278 1338 aa29.91■■■□□ 2.38
CPNE1-202ENST00000352393 GNAT3A8MTJ3 354 aa29.9■■■□□ 2.38
CPNE1-202ENST00000352393 SLC26A8Q96RN1 970 aa29.9■■■□□ 2.38
CPNE1-202ENST00000352393 RBM27Q9P2N5 1060 aaKnown RBP29.9■■■□□ 2.38
CPNE1-202ENST00000352393 SRCIN1Q9C0H9 1055 aa29.9■■■□□ 2.38
CPNE1-202ENST00000352393 MAP3K5Q99683 1374 aa29.89■■■□□ 2.38
CPNE1-202ENST00000352393 SLIT1O75093 1534 aa29.89■■■□□ 2.38
CPNE1-202ENST00000352393 BRD1O95696 1058 aa29.89■■■□□ 2.38
CPNE1-202ENST00000352393 PRIM1P49642 420 aaKnown RBP29.89■■■□□ 2.38
CPNE1-202ENST00000352393 PDLIM2Q96JY6 352 aa29.89■■■□□ 2.37
CPNE1-202ENST00000352393 LRRFIP2Q9Y608 721 aaKnown RBP29.89■■■□□ 2.37
CPNE1-202ENST00000352393 ARHGAP23Q9P227 1491 aa29.88■■■□□ 2.37
CPNE1-202ENST00000352393 CHAMP1Q96JM3 812 aa29.88■■■□□ 2.37
CPNE1-202ENST00000352393 AMOTL2Q9Y2J4 779 aa29.88■■■□□ 2.37
CPNE1-202ENST00000352393 NGDNQ8NEJ9 315 aaKnown RBP29.87■■■□□ 2.37
CPNE1-202ENST00000352393 INTS4Q96HW7 963 aaKnown RBP29.87■■■□□ 2.37
CPNE1-202ENST00000352393 TMEM63CQ9P1W3 806 aa29.87■■■□□ 2.37
CPNE1-202ENST00000352393 HS1BP3Q53T59 392 aa29.87■■■□□ 2.37
CPNE1-202ENST00000352393 ANO2Q9NQ90 1003 aa29.87■■■□□ 2.37
CPNE1-202ENST00000352393 BABAM1Q9NWV8 329 aa29.87■■■□□ 2.37
CPNE1-202ENST00000352393 RILPL2Q969X0 211 aa29.86■■■□□ 2.37
CPNE1-202ENST00000352393 TRIM6-TRIM34B2RNG4 842 aa29.85■■■□□ 2.37
CPNE1-202ENST00000352393 LRSAM1Q6UWE0 723 aa29.85■■■□□ 2.37
CPNE1-202ENST00000352393 MBD3O95983 291 aa29.84■■■□□ 2.37
CPNE1-202ENST00000352393 UNC5CLQ8IV45 518 aa29.84■■■□□ 2.37
CPNE1-202ENST00000352393 NECTIN2Q92692 538 aa29.84■■■□□ 2.37
CPNE1-202ENST00000352393 USP44Q9H0E7 712 aa29.84■■■□□ 2.37
CPNE1-202ENST00000352393 HOXC9P31274 260 aa29.84■■■□□ 2.37
CPNE1-202ENST00000352393 IL17REQ8NFR9 667 aa29.84■■■□□ 2.37
CPNE1-202ENST00000352393 NSFL1CQ9UNZ2 370 aaKnown RBP29.84■■■□□ 2.37
CPNE1-202ENST00000352393 EPB41L2O43491 1005 aaKnown RBP29.83■■■□□ 2.37
CPNE1-202ENST00000352393 ANKARQ7Z5J8 1434 aa29.82■■■□□ 2.36
CPNE1-202ENST00000352393 SSH3Q8TE77 659 aa29.82■■■□□ 2.36
CPNE1-202ENST00000352393 TBX22Q9Y458 520 aa29.81■■■□□ 2.36
CPNE1-202ENST00000352393 EID1Q9Y6B2 187 aa29.81■■■□□ 2.36
CPNE1-202ENST00000352393 UBTFL1P0CB47 393 aaPredicted RBP29.81■■■□□ 2.36
CPNE1-202ENST00000352393 FOXD4L5Q5VV16 416 aaPredicted RBP29.81■■■□□ 2.36
CPNE1-202ENST00000352393 FOXD4L4Q8WXT5 416 aaPredicted RBP29.81■■■□□ 2.36
CPNE1-202ENST00000352393 TAF7Q15545 349 aaPredicted RBP29.8■■■□□ 2.36
CPNE1-202ENST00000352393 MED1Q15648 1581 aaPredicted RBP29.8■■■□□ 2.36
CPNE1-202ENST00000352393 CRYBG1Q9Y4K1 1723 aa29.8■■■□□ 2.36
CPNE1-202ENST00000352393 MSNP26038 577 aaKnown RBP29.8■■■□□ 2.36
CPNE1-202ENST00000352393 SYCE3A1L190 88 aa29.79■■■□□ 2.36
CPNE1-202ENST00000352393 TPM2P07951 284 aa29.79■■■□□ 2.36
CPNE1-202ENST00000352393 NLRP6P59044 892 aa29.79■■■□□ 2.36
CPNE1-202ENST00000352393 IL25Q9H293 177 aa29.78■■■□□ 2.36
CPNE1-202ENST00000352393 OFD1O75665 1012 aa29.77■■■□□ 2.36
CPNE1-202ENST00000352393 POLA2Q14181 598 aa29.77■■■□□ 2.36
CPNE1-202ENST00000352393 HSPA4P34932 840 aa29.77■■■□□ 2.36
CPNE1-202ENST00000352393 NOL7Q9UMY1 257 aaKnown RBP29.77■■■□□ 2.36
CPNE1-202ENST00000352393 KDM3BQ7LBC6 1761 aa29.76■■■□□ 2.36
CPNE1-202ENST00000352393 RAB11FIP3O75154 756 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms