RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.22
SMC6-201ENST00000351948 BTG4Q9NY30 223 aa16.46■□□□□ 0.22
SMC6-201ENST00000351948 HIP1O00291 1037 aa16.45■□□□□ 0.22
SMC6-201ENST00000351948 SNRPA1P09661 255 aaKnown RBP16.45■□□□□ 0.22
SMC6-201ENST00000351948 KIAA2012Q0VF49 1180 aa16.45■□□□□ 0.22
SMC6-201ENST00000351948 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
SMC6-201ENST00000351948 TMEM2Q9UHN6 1383 aa16.45■□□□□ 0.22
SMC6-201ENST00000351948 IFIT5Q13325 482 aaKnown RBP16.45■□□□□ 0.22
SMC6-201ENST00000351948 MX1P20591 662 aa16.45■□□□□ 0.22
SMC6-201ENST00000351948 DDB1Q16531 1140 aa16.45■□□□□ 0.22
SMC6-201ENST00000351948 TCEAL9Q9UHQ7 104 aa16.44■□□□□ 0.22
SMC6-201ENST00000351948 XAGE3Q8WTP9 111 aa16.44■□□□□ 0.22
SMC6-201ENST00000351948 TTC37Q6PGP7 1564 aa16.44■□□□□ 0.22
SMC6-201ENST00000351948 COPS6Q7L5N1 327 aa16.44■□□□□ 0.22
SMC6-201ENST00000351948 TPD52L1Q16890 204 aaPredicted RBP16.44■□□□□ 0.22
SMC6-201ENST00000351948 SART3Q15020 963 aaKnown RBP16.43■□□□□ 0.22
SMC6-201ENST00000351948 SAFBQ15424 915 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMC6-201ENST00000351948 MEIS3Q99687 375 aa16.43■□□□□ 0.22
SMC6-201ENST00000351948 ARHGEF12Q9NZN5 1544 aa16.43■□□□□ 0.22
SMC6-201ENST00000351948 BECN2A8MW95 431 aa16.43■□□□□ 0.22
SMC6-201ENST00000351948 CEBPZQ03701 1054 aaKnown RBP16.43■□□□□ 0.22
SMC6-201ENST00000351948 ANKIB1Q9P2G1 1089 aa16.43■□□□□ 0.22
SMC6-201ENST00000351948 BCL11BQ9C0K0 894 aaPredicted RBP16.43■□□□□ 0.22
SMC6-201ENST00000351948 IL2RBP14784 551 aa16.42■□□□□ 0.22
SMC6-201ENST00000351948 PDE4CQ08493 712 aa16.42■□□□□ 0.22
SMC6-201ENST00000351948 ANKRD13DQ6ZTN6 518 aa16.42■□□□□ 0.22
SMC6-201ENST00000351948 AK7Q96M32 723 aa16.42■□□□□ 0.22
SMC6-201ENST00000351948 EIF2AK4Q9P2K8 1649 aaKnown RBP16.42■□□□□ 0.22
SMC6-201ENST00000351948 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
SMC6-201ENST00000351948 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 NUCB2P80303 420 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 PPP1R42Q7Z4L9 355 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 SNRKQ9NRH2 765 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 TDO2P48775 406 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 ZSCAN29Q8IWY8 852 aaPredicted RBP16.41■□□□□ 0.22
SMC6-201ENST00000351948 IGHDP01880 384 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 CYP46A1Q9Y6A2 500 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 SAMD9LQ8IVG5 1584 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 UGGT1Q9NYU2 1555 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 RABEP1Q15276 862 aa16.41■□□□□ 0.22
SMC6-201ENST00000351948 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
SMC6-201ENST00000351948 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
SMC6-201ENST00000351948 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
SMC6-201ENST00000351948 UPF3BQ9BZI7 483 aaKnown RBP16.4■□□□□ 0.22
SMC6-201ENST00000351948 NACAP1Q9BZK3 213 aa16.4■□□□□ 0.22
SMC6-201ENST00000351948 PTPRCP08575 1304 aa16.4■□□□□ 0.22
SMC6-201ENST00000351948 POLR3AO14802 1390 aaPredicted RBP16.4■□□□□ 0.22
SMC6-201ENST00000351948 KDM6BO15054 1643 aa16.4■□□□□ 0.22
SMC6-201ENST00000351948 GOLGA6L19H0YKK7 550 aa16.4■□□□□ 0.22
SMC6-201ENST00000351948 IP6K1Q92551 441 aa16.4■□□□□ 0.22
SMC6-201ENST00000351948 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
SMC6-201ENST00000351948 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.39■□□□□ 0.21
SMC6-201ENST00000351948 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
SMC6-201ENST00000351948 CWC25Q9NXE8 425 aaPredicted RBP16.39■□□□□ 0.21
SMC6-201ENST00000351948 LDHAL6AQ6ZMR3 332 aa16.39■□□□□ 0.21
SMC6-201ENST00000351948 TRPM2O94759 1503 aa16.39■□□□□ 0.21
SMC6-201ENST00000351948 COL17A1Q9UMD9 1497 aaPredicted RBP16.39■□□□□ 0.21
SMC6-201ENST00000351948 PUS7Q96PZ0 661 aaKnown RBP16.38■□□□□ 0.21
SMC6-201ENST00000351948 CWC22Q9HCG8 908 aaKnown RBP16.38■□□□□ 0.21
SMC6-201ENST00000351948 SLAIN2Q9P270 581 aa16.38■□□□□ 0.21
SMC6-201ENST00000351948 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
SMC6-201ENST00000351948 IL16Q14005 1332 aa16.38■□□□□ 0.21
SMC6-201ENST00000351948 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
SMC6-201ENST00000351948 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
SMC6-201ENST00000351948 GLRX3O76003 335 aaKnown RBP16.37■□□□□ 0.21
SMC6-201ENST00000351948 SLC3A2P08195 630 aaKnown RBP16.37■□□□□ 0.21
SMC6-201ENST00000351948 RFC4P35249 363 aa16.37■□□□□ 0.21
SMC6-201ENST00000351948 NFKBIBQ15653 356 aa16.37■□□□□ 0.21
SMC6-201ENST00000351948 ANKRD18BA2A2Z9 1011 aa16.37■□□□□ 0.21
SMC6-201ENST00000351948 FIBPO43427 364 aa16.37■□□□□ 0.21
SMC6-201ENST00000351948 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
SMC6-201ENST00000351948 ARID3AQ99856 593 aa16.37■□□□□ 0.21
SMC6-201ENST00000351948 SKOR2Q2VWA4 1001 aaPredicted RBP16.36■□□□□ 0.21
SMC6-201ENST00000351948 BLOC1S2Q6QNY1 142 aa16.36■□□□□ 0.21
SMC6-201ENST00000351948 PCDHB15Q9Y5E8 787 aa16.36■□□□□ 0.21
SMC6-201ENST00000351948 METP08581 1390 aa16.36■□□□□ 0.21
SMC6-201ENST00000351948 GSE1Q14687 1217 aa16.36■□□□□ 0.21
SMC6-201ENST00000351948 ZCCHC11Q5TAX3 1644 aaKnown RBP16.36■□□□□ 0.21
SMC6-201ENST00000351948 TEX13AQ9BXU3 409 aaPredicted RBP16.36■□□□□ 0.21
SMC6-201ENST00000351948 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
SMC6-201ENST00000351948 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
SMC6-201ENST00000351948 RPGRQ92834 1020 aaKnown RBP16.35■□□□□ 0.21
SMC6-201ENST00000351948 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
SMC6-201ENST00000351948 AKAP2Q9Y2D5 859 aa16.35■□□□□ 0.21
SMC6-201ENST00000351948 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
SMC6-201ENST00000351948 RLBP1P12271 317 aa16.35■□□□□ 0.21
SMC6-201ENST00000351948 ZSCAN25Q6NSZ9 544 aa16.35■□□□□ 0.21
SMC6-201ENST00000351948 C6orf229H3BNL8 230 aa16.35■□□□□ 0.21
SMC6-201ENST00000351948 CAVIN4Q5BKX8 364 aa16.35■□□□□ 0.21
SMC6-201ENST00000351948 CCDC73Q6ZRK6 1079 aa16.35■□□□□ 0.21
SMC6-201ENST00000351948 LARP6Q9BRS8 491 aaKnown RBP16.35■□□□□ 0.21
SMC6-201ENST00000351948 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
SMC6-201ENST00000351948 PHAXQ9H814 394 aaKnown RBP16.34■□□□□ 0.21
SMC6-201ENST00000351948 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
SMC6-201ENST00000351948 IQSEC3Q9UPP2 1182 aaPredicted RBP16.34■□□□□ 0.21
SMC6-201ENST00000351948 IL13P35225 146 aa16.34■□□□□ 0.21
SMC6-201ENST00000351948 MRPL50Q8N5N7 158 aaKnown RBP16.34■□□□□ 0.21
SMC6-201ENST00000351948 CASTP20810 708 aaKnown RBP16.34■□□□□ 0.21
SMC6-201ENST00000351948 VAMP4O75379 141 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms