RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
SMPD4-201ENST00000351288 SDSP20132 328 aa12.77□□□□□ -0.37
SMPD4-201ENST00000351288 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.37
SMPD4-201ENST00000351288 ANKRD26Q9UPS8 1709 aa12.77□□□□□ -0.37
SMPD4-201ENST00000351288 CDC45O75419 566 aa12.77□□□□□ -0.37
SMPD4-201ENST00000351288 PKP1Q13835 747 aa12.77□□□□□ -0.37
SMPD4-201ENST00000351288 TTC21AQ8NDW8 1320 aa12.77□□□□□ -0.37
SMPD4-201ENST00000351288 XRCC6P12956 609 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMPD4-201ENST00000351288 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-201ENST00000351288 KCNH5Q8NCM2 988 aa12.76□□□□□ -0.37
SMPD4-201ENST00000351288 CHPF2Q9P2E5 772 aa12.76□□□□□ -0.37
SMPD4-201ENST00000351288 CDK12Q9NYV4 1490 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-201ENST00000351288 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
SMPD4-201ENST00000351288 GOLGA6L3A6NEY3 463 aa12.76□□□□□ -0.37
SMPD4-201ENST00000351288 RBM25P49756 843 aaKnown RBP12.76□□□□□ -0.37
SMPD4-201ENST00000351288 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
SMPD4-201ENST00000351288 NUTM2BA6NNL0 878 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-201ENST00000351288 NUTM2EB1AL46 878 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-201ENST00000351288 NUTM2AQ8IVF1 878 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-201ENST00000351288 NRXN3Q9Y4C0 1643 aa12.75□□□□□ -0.37
SMPD4-201ENST00000351288 RIMS1Q86UR5 1692 aaKnown RBP12.75□□□□□ -0.37
SMPD4-201ENST00000351288 IL17REQ8NFR9 667 aa12.75□□□□□ -0.37
SMPD4-201ENST00000351288 PTCH1Q13635 1447 aa12.75□□□□□ -0.37
SMPD4-201ENST00000351288 DLC1Q96QB1 1528 aa12.75□□□□□ -0.37
SMPD4-201ENST00000351288 TTC22Q5TAA0 569 aa12.74□□□□□ -0.37
SMPD4-201ENST00000351288 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
SMPD4-201ENST00000351288 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
SMPD4-201ENST00000351288 PTPRUQ92729 1446 aa12.74□□□□□ -0.37
SMPD4-201ENST00000351288 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
SMPD4-201ENST00000351288 KIAA1211Q6ZU35 1233 aa12.74□□□□□ -0.37
SMPD4-201ENST00000351288 ADAMTS13Q76LX8 1427 aa12.74□□□□□ -0.37
SMPD4-201ENST00000351288 GNAI3P08754 354 aa12.74□□□□□ -0.37
SMPD4-201ENST00000351288 SPATA31D1Q6ZQQ2 1576 aa12.73□□□□□ -0.37
SMPD4-201ENST00000351288 PLEKHG1Q9ULL1 1385 aa12.73□□□□□ -0.37
SMPD4-201ENST00000351288 K7ELQ4 463 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-201ENST00000351288 NEXNQ0ZGT2 675 aa12.73□□□□□ -0.37
SMPD4-201ENST00000351288 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
SMPD4-201ENST00000351288 CCT4P50991 539 aaKnown RBP12.73□□□□□ -0.37
SMPD4-201ENST00000351288 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-201ENST00000351288 PIP4K2BP78356 416 aa12.73□□□□□ -0.37
SMPD4-201ENST00000351288 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
SMPD4-201ENST00000351288 USP6P35125 1406 aa12.73□□□□□ -0.37
SMPD4-201ENST00000351288 RTL1A6NKG5 1358 aa12.73□□□□□ -0.37
SMPD4-201ENST00000351288 CABP4P57796 275 aa12.73□□□□□ -0.37
SMPD4-201ENST00000351288 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
SMPD4-201ENST00000351288 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
SMPD4-201ENST00000351288 ATP5J2-PTCD1G3V325 749 aa12.72□□□□□ -0.37
SMPD4-201ENST00000351288 FGD1P98174 961 aa12.72□□□□□ -0.37
SMPD4-201ENST00000351288 RRAGDQ9NQL2 400 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-201ENST00000351288 CDC42BPGQ6DT37 1551 aa12.72□□□□□ -0.37
SMPD4-201ENST00000351288 ADAMTS2O95450 1211 aa12.72□□□□□ -0.37
SMPD4-201ENST00000351288 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
SMPD4-201ENST00000351288 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
SMPD4-201ENST00000351288 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.38
SMPD4-201ENST00000351288 IFIT2P09913 472 aaKnown RBP12.71□□□□□ -0.38
SMPD4-201ENST00000351288 CWF19L2Q2TBE0 894 aaKnown RBP12.71□□□□□ -0.38
SMPD4-201ENST00000351288 GAS2L3Q86XJ1 694 aa12.71□□□□□ -0.38
SMPD4-201ENST00000351288 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.38
SMPD4-201ENST00000351288 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.71□□□□□ -0.38
SMPD4-201ENST00000351288 MCTP1Q6DN14 999 aa12.7□□□□□ -0.38
SMPD4-201ENST00000351288 IP6K1Q92551 441 aa12.7□□□□□ -0.38
SMPD4-201ENST00000351288 SETD1AO15047 1707 aaKnown RBP12.7□□□□□ -0.38
SMPD4-201ENST00000351288 RPAP2Q8IXW5 612 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-201ENST00000351288 KNDC1Q76NI1 1749 aa12.7□□□□□ -0.38
SMPD4-201ENST00000351288 NEUROD6Q96NK8 337 aa12.7□□□□□ -0.38
SMPD4-201ENST00000351288 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 GOLGA6L22H0YM25 854 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 DDX58O95786 925 aaKnown RBP12.69□□□□□ -0.38
SMPD4-201ENST00000351288 TAF7LQ5H9L4 462 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 MAP3K2Q9Y2U5 619 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 RGS12O14924 1447 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 NPHP1O15259 732 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 MCCP23508 829 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 UNC5CLQ8IV45 518 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 USP26Q9BXU7 913 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 UPF3BQ9BZI7 483 aaKnown RBP12.69□□□□□ -0.38
SMPD4-201ENST00000351288 ATP10DQ9P241 1426 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 NEK4P51957 841 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 G3BP1Q13283 466 aaKnown RBP eCLIP12.69□□□□□ -0.384e-7■□□□□ 10.4
SMPD4-201ENST00000351288 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 PPP1R42Q7Z4L9 355 aa12.69□□□□□ -0.38
SMPD4-201ENST00000351288 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
SMPD4-201ENST00000351288 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
SMPD4-201ENST00000351288 SIRT1Q96EB6 747 aa12.68□□□□□ -0.38
SMPD4-201ENST00000351288 CEP170BQ9Y4F5 1589 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-201ENST00000351288 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
SMPD4-201ENST00000351288 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
SMPD4-201ENST00000351288 PDE1AP54750 535 aa12.68□□□□□ -0.38
SMPD4-201ENST00000351288 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
SMPD4-201ENST00000351288 SNX21Q969T3 373 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 MYD88Q99836 296 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 DDX49Q9Y6V7 483 aaKnown RBP12.67□□□□□ -0.38
SMPD4-201ENST00000351288 CRB1P82279 1406 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 ZBTB3Q9H5J0 574 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 SPG7Q9UQ90 795 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 PEAK1Q9H792 1746 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-201ENST00000351288 AGLP35573 1532 aa12.67□□□□□ -0.38
SMPD4-201ENST00000351288 RAB3GAP1Q15042 981 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms