RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-205ENST00000350435 PASKQ96RG2 1323 aa13.35□□□□□ -0.27
UBE2D3-205ENST00000350435 C4AP0C0L4 1744 aa13.34□□□□□ -0.27
UBE2D3-205ENST00000350435 KDM6AO15550 1401 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-205ENST00000350435 RASSF7Q02833 373 aa13.34□□□□□ -0.27
UBE2D3-205ENST00000350435 NFAT5O94916 1531 aa13.34□□□□□ -0.27
UBE2D3-205ENST00000350435 RASSF10A6NK89 507 aa13.33□□□□□ -0.28
UBE2D3-205ENST00000350435 HABP4Q5JVS0 413 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-205ENST00000350435 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
UBE2D3-205ENST00000350435 LTN1O94822 1766 aa13.32□□□□□ -0.28
UBE2D3-205ENST00000350435 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
UBE2D3-205ENST00000350435 POTEJP0CG39 1038 aa13.31□□□□□ -0.28
UBE2D3-205ENST00000350435 NLGN1Q8N2Q7 840 aa13.31□□□□□ -0.28
UBE2D3-205ENST00000350435 ANKRD24Q8TF21 1146 aa13.31□□□□□ -0.28
UBE2D3-205ENST00000350435 TSKSQ9UJT2 592 aa13.31□□□□□ -0.28
UBE2D3-205ENST00000350435 THSD7BQ9C0I4 1608 aa13.31□□□□□ -0.28
UBE2D3-205ENST00000350435 SRPK2P78362 688 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-205ENST00000350435 PARP3Q9Y6F1 533 aa13.3□□□□□ -0.28
UBE2D3-205ENST00000350435 TMF1P82094 1093 aa13.29□□□□□ -0.28
UBE2D3-205ENST00000350435 NBPF15Q8N660 670 aa13.29□□□□□ -0.28
UBE2D3-205ENST00000350435 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-205ENST00000350435 ABT1Q9ULW3 272 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-205ENST00000350435 DICER1Q9UPY3 1922 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-205ENST00000350435 LTBP1Q14766 1721 aa13.27□□□□□ -0.28
UBE2D3-205ENST00000350435 GNPATO15228 680 aa13.27□□□□□ -0.29
UBE2D3-205ENST00000350435 LDHDQ86WU2 507 aa13.27□□□□□ -0.29
UBE2D3-205ENST00000350435 ZCRB1Q8TBF4 217 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-205ENST00000350435 ECE1P42892 770 aa13.26□□□□□ -0.29
UBE2D3-205ENST00000350435 PAXIP1Q6ZW49 1069 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-205ENST00000350435 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
UBE2D3-205ENST00000350435 CA12O43570 354 aa13.25□□□□□ -0.29
UBE2D3-205ENST00000350435 ITGBL1O95965 494 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-205ENST00000350435 GPR101Q96P66 508 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-205ENST00000350435 CABP1Q9NZU7 370 aa13.25□□□□□ -0.29
UBE2D3-205ENST00000350435 SCN4AP35499 1836 aa13.25□□□□□ -0.29
UBE2D3-205ENST00000350435 TTC21BQ7Z4L5 1316 aa13.24□□□□□ -0.29
UBE2D3-205ENST00000350435 GRM1Q13255 1194 aa13.24□□□□□ -0.29
UBE2D3-205ENST00000350435 CAPNS2Q96L46 248 aa13.24□□□□□ -0.29
UBE2D3-205ENST00000350435 ITGB4P16144 1822 aa13.24□□□□□ -0.29
UBE2D3-205ENST00000350435 CHRNA5P30532 468 aa13.23□□□□□ -0.29
UBE2D3-205ENST00000350435 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
UBE2D3-205ENST00000350435 LINC00116Q8NCU8 138 aa13.23□□□□□ -0.29
UBE2D3-205ENST00000350435 SLC17A8Q8NDX2 589 aa13.23□□□□□ -0.29
UBE2D3-205ENST00000350435 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
UBE2D3-205ENST00000350435 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
UBE2D3-205ENST00000350435 IQCA1LA6NCM1 817 aa13.22□□□□□ -0.29
UBE2D3-205ENST00000350435 FXR1P51114 621 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBE2D3-205ENST00000350435 MAP2P11137 1827 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-205ENST00000350435 TRAPPC3LQ5T215 181 aa13.21□□□□□ -0.29
UBE2D3-205ENST00000350435 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
UBE2D3-205ENST00000350435 ADAMTS7Q9UKP4 1686 aa13.19□□□□□ -0.3
UBE2D3-205ENST00000350435 DDNO94850 711 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-205ENST00000350435 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
UBE2D3-205ENST00000350435 EAPPQ56P03 285 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-205ENST00000350435 CYP4F22Q6NT55 531 aa13.19□□□□□ -0.3
UBE2D3-205ENST00000350435 ZNF692Q9BU19 519 aaPredicted RBP13.19□□□□□ -0.3
UBE2D3-205ENST00000350435 PITPNM2Q9BZ72 1349 aa13.18□□□□□ -0.3
UBE2D3-205ENST00000350435 RGPD2P0DJD1 1756 aa13.18□□□□□ -0.3
UBE2D3-205ENST00000350435 GYS1P13807 737 aa13.18□□□□□ -0.3
UBE2D3-205ENST00000350435 MAP2K2P36507 400 aa13.18□□□□□ -0.3
UBE2D3-205ENST00000350435 NBPF1Q3BBV0 1214 aa13.18□□□□□ -0.3
UBE2D3-205ENST00000350435 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
UBE2D3-205ENST00000350435 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
UBE2D3-205ENST00000350435 RTCBQ9Y3I0 505 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-205ENST00000350435 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
UBE2D3-205ENST00000350435 SIK1P57059 783 aa13.17□□□□□ -0.3
UBE2D3-205ENST00000350435 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-205ENST00000350435 TAF1DQ9H5J8 278 aaPredicted RBP13.17□□□□□ -0.3
UBE2D3-205ENST00000350435 DLEC1Q9Y238 1755 aa13.17□□□□□ -0.3
UBE2D3-205ENST00000350435 LOC105371045A0A1W2PR82 267 aa13.16□□□□□ -0.3
UBE2D3-205ENST00000350435 NFKBIEO00221 500 aa13.16□□□□□ -0.3
UBE2D3-205ENST00000350435 RFC4P35249 363 aa13.16□□□□□ -0.3
UBE2D3-205ENST00000350435 CNTROBQ8N137 903 aa13.16□□□□□ -0.3
UBE2D3-205ENST00000350435 MEGF6O75095 1541 aa13.16□□□□□ -0.3
UBE2D3-205ENST00000350435 TRPM7Q96QT4 1865 aa13.15□□□□□ -0.3
UBE2D3-205ENST00000350435 AOC2O75106 756 aa13.15□□□□□ -0.3
UBE2D3-205ENST00000350435 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-205ENST00000350435 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
UBE2D3-205ENST00000350435 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.31
UBE2D3-205ENST00000350435 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
UBE2D3-205ENST00000350435 A0A0C4DFX4 3053 aa13.14□□□□□ -0.31
UBE2D3-205ENST00000350435 FER1L6Q2WGJ9 1857 aa13.13□□□□□ -0.31
UBE2D3-205ENST00000350435 ITPK1Q13572 414 aa13.13□□□□□ -0.31
UBE2D3-205ENST00000350435 MAP1SQ66K74 1059 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-205ENST00000350435 TTLL6Q8N841 843 aa13.13□□□□□ -0.31
UBE2D3-205ENST00000350435 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
UBE2D3-205ENST00000350435 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-205ENST00000350435 DCAF11Q8TEB1 546 aa13.12□□□□□ -0.31
UBE2D3-205ENST00000350435 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBE2D3-205ENST00000350435 IP6K1Q92551 441 aa13.11□□□□□ -0.31
UBE2D3-205ENST00000350435 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-205ENST00000350435 CUL9Q8IWT3 2517 aa13.11□□□□□ -0.31
UBE2D3-205ENST00000350435 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
UBE2D3-205ENST00000350435 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
UBE2D3-205ENST00000350435 USP31Q70CQ4 1352 aa13.1□□□□□ -0.31
UBE2D3-205ENST00000350435 PNMA8AQ86V59 439 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-205ENST00000350435 PIGBQ92521 554 aa13.1□□□□□ -0.31
UBE2D3-205ENST00000350435 KTN1Q86UP2 1357 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-205ENST00000350435 DDR1Q08345 913 aa13.09□□□□□ -0.31
UBE2D3-205ENST00000350435 RAPGEF4Q8WZA2 1011 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms