RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
SAMM50-201ENST00000350028 NPHP3Q7Z494 1330 aa20.86■□□□□ 0.93
SAMM50-201ENST00000350028 PLEKHG5O94827 1062 aa20.86■□□□□ 0.93
SAMM50-201ENST00000350028 TEFQ10587 303 aa20.86■□□□□ 0.93
SAMM50-201ENST00000350028 C1orf141Q5JVX7 400 aa20.86■□□□□ 0.93
SAMM50-201ENST00000350028 AXIN2Q9Y2T1 843 aa20.86■□□□□ 0.93
SAMM50-201ENST00000350028 SLC4A10Q6U841 1118 aa20.85■□□□□ 0.93
SAMM50-201ENST00000350028 F6X3S4 739 aa20.84■□□□□ 0.93
SAMM50-201ENST00000350028 EIF4A1P60842 406 aaKnown RBP20.84■□□□□ 0.93
SAMM50-201ENST00000350028 BECN1Q14457 450 aa20.84■□□□□ 0.93
SAMM50-201ENST00000350028 RGPD5Q99666 1765 aa20.84■□□□□ 0.93
SAMM50-201ENST00000350028 RNMTO43148 476 aaKnown RBP20.84■□□□□ 0.93
SAMM50-201ENST00000350028 HMMRO75330 724 aa20.84■□□□□ 0.93
SAMM50-201ENST00000350028 FKBP5Q13451 457 aaPredicted RBP20.84■□□□□ 0.93
SAMM50-201ENST00000350028 HDGFL1Q5TGJ6 251 aa20.84■□□□□ 0.93
SAMM50-201ENST00000350028 SLC4A3P48751 1232 aa20.83■□□□□ 0.92
SAMM50-201ENST00000350028 ZC3H6P61129 1189 aaKnown RBP20.83■□□□□ 0.92
SAMM50-201ENST00000350028 NBR1Q14596 966 aa20.83■□□□□ 0.92
SAMM50-201ENST00000350028 ERBB3P21860 1342 aa20.83■□□□□ 0.92
SAMM50-201ENST00000350028 PXDNLA1KZ92 1463 aa20.82■□□□□ 0.92
SAMM50-201ENST00000350028 SLAIN2Q9P270 581 aa20.82■□□□□ 0.92
SAMM50-201ENST00000350028 N4BP2Q86UW6 1770 aaPredicted RBP20.82■□□□□ 0.92
SAMM50-201ENST00000350028 GNAI3P08754 354 aa20.81■□□□□ 0.92
SAMM50-201ENST00000350028 NECTIN2Q92692 538 aa20.81■□□□□ 0.92
SAMM50-201ENST00000350028 TNS3Q68CZ2 1445 aa20.81■□□□□ 0.92
SAMM50-201ENST00000350028 BTBD11A6QL63 1104 aa20.81■□□□□ 0.92
SAMM50-201ENST00000350028 GNAI2P04899 355 aa20.81■□□□□ 0.92
SAMM50-201ENST00000350028 MPRIPQ6WCQ1 1025 aa20.81■□□□□ 0.92
SAMM50-201ENST00000350028 DDX17Q92841 729 aaKnown RBP20.81■□□□□ 0.92
SAMM50-201ENST00000350028 ABCC6O95255 1503 aa20.8■□□□□ 0.92
SAMM50-201ENST00000350028 BRINP3Q76B58 766 aa20.8■□□□□ 0.92
SAMM50-201ENST00000350028 C22orf23Q9BZE7 217 aa20.8■□□□□ 0.92
SAMM50-201ENST00000350028 PXDNQ92626 1479 aa20.8■□□□□ 0.92
SAMM50-201ENST00000350028 MFAP1P55081 439 aaKnown RBP20.79■□□□□ 0.92
SAMM50-201ENST00000350028 COL18A1P39060 1754 aa20.79■□□□□ 0.92
SAMM50-201ENST00000350028 SPATA31A3Q5VYP0 1347 aa20.78■□□□□ 0.92
SAMM50-201ENST00000350028 RTL5Q5HYW3 569 aaPredicted RBP20.78■□□□□ 0.92
SAMM50-201ENST00000350028 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
SAMM50-201ENST00000350028 PLEKHG2Q9H7P9 1386 aa20.77■□□□□ 0.92
SAMM50-201ENST00000350028 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.92
SAMM50-201ENST00000350028 RAPGEF4Q8WZA2 1011 aa20.77■□□□□ 0.92
SAMM50-201ENST00000350028 USP35Q9P2H5 1018 aa20.77■□□□□ 0.92
SAMM50-201ENST00000350028 EIF5BO60841 1220 aaKnown RBP20.76■□□□□ 0.91
SAMM50-201ENST00000350028 KCNQ3O43525 872 aa20.75■□□□□ 0.91
SAMM50-201ENST00000350028 EIF2S2P20042 333 aaKnown RBP20.75■□□□□ 0.91
SAMM50-201ENST00000350028 NLRP2Q9NX02 1062 aa20.75■□□□□ 0.91
SAMM50-201ENST00000350028 SIPA1L3O60292 1781 aaPredicted RBP20.75■□□□□ 0.91
SAMM50-201ENST00000350028 TATP17735 454 aaPredicted RBP20.75■□□□□ 0.91
SAMM50-201ENST00000350028 PHAXQ9H814 394 aaKnown RBP20.75■□□□□ 0.91
SAMM50-201ENST00000350028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.75■□□□□ 0.91
SAMM50-201ENST00000350028 CRYBG1Q9Y4K1 1723 aa20.74■□□□□ 0.91
SAMM50-201ENST00000350028 ATP8B2P98198 1209 aa20.74■□□□□ 0.91
SAMM50-201ENST00000350028 CPDO75976 1380 aa20.73■□□□□ 0.91
SAMM50-201ENST00000350028 HEG1Q9ULI3 1381 aa20.73■□□□□ 0.91
SAMM50-201ENST00000350028 SPG7Q9UQ90 795 aa20.73■□□□□ 0.91
SAMM50-201ENST00000350028 CDC45O75419 566 aa20.72■□□□□ 0.91
SAMM50-201ENST00000350028 RBM25P49756 843 aaKnown RBP20.72■□□□□ 0.91
SAMM50-201ENST00000350028 TTC22Q5TAA0 569 aa20.72■□□□□ 0.91
SAMM50-201ENST00000350028 CHPF2Q9P2E5 772 aa20.72■□□□□ 0.91
SAMM50-201ENST00000350028 ROBO1Q9Y6N7 1651 aa20.72■□□□□ 0.91
SAMM50-201ENST00000350028 CSB-PGBD3P0DP91 1061 aa20.71■□□□□ 0.91
SAMM50-201ENST00000350028 CABLES1Q8TDN4 633 aa20.71■□□□□ 0.91
SAMM50-201ENST00000350028 SRCIN1Q9C0H9 1055 aa20.71■□□□□ 0.91
SAMM50-201ENST00000350028 DBF4Q9UBU7 674 aaPredicted RBP20.71■□□□□ 0.91
SAMM50-201ENST00000350028 NHSL1Q5SYE7 1610 aa20.7■□□□□ 0.9
SAMM50-201ENST00000350028 GIGYF1O75420 1035 aaPredicted RBP20.7■□□□□ 0.9
SAMM50-201ENST00000350028 TBC1D9Q6ZT07 1266 aa20.7■□□□□ 0.9
SAMM50-201ENST00000350028 C16orf71Q8IYS4 520 aaPredicted RBP20.7■□□□□ 0.9
SAMM50-201ENST00000350028 USP44Q9H0E7 712 aa20.7■□□□□ 0.9
SAMM50-201ENST00000350028 UBTFL1P0CB47 393 aaPredicted RBP20.7■□□□□ 0.9
SAMM50-201ENST00000350028 GSPT1P15170 499 aaKnown RBP20.7■□□□□ 0.9
SAMM50-201ENST00000350028 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
SAMM50-201ENST00000350028 DNAAF4Q8WXU2 420 aa20.69■□□□□ 0.9
SAMM50-201ENST00000350028 TBC1D2Q9BYX2 928 aa20.69■□□□□ 0.9
SAMM50-201ENST00000350028 SMARCA5O60264 1052 aaPredicted RBP20.68■□□□□ 0.9
SAMM50-201ENST00000350028 PHKG2P15735 406 aa20.68■□□□□ 0.9
SAMM50-201ENST00000350028 CERKQ8TCT0 537 aa20.68■□□□□ 0.9
SAMM50-201ENST00000350028 IFNL2Q8IZJ0 200 aa20.67■□□□□ 0.9
SAMM50-201ENST00000350028 LRRFIP2Q9Y608 721 aaKnown RBP20.67■□□□□ 0.9
SAMM50-201ENST00000350028 CHRNA2Q15822 529 aa20.67■□□□□ 0.9
SAMM50-201ENST00000350028 OSBPL3Q9H4L5 887 aa20.67■□□□□ 0.9
SAMM50-201ENST00000350028 APBB1O00213 710 aa20.66■□□□□ 0.9
SAMM50-201ENST00000350028 BEND3Q5T5X7 828 aa20.66■□□□□ 0.9
SAMM50-201ENST00000350028 SLC52A2Q9HAB3 445 aa20.66■□□□□ 0.9
SAMM50-201ENST00000350028 MEGF6O75095 1541 aa20.66■□□□□ 0.9
SAMM50-201ENST00000350028 SOS2Q07890 1332 aaPredicted RBP20.65■□□□□ 0.9
SAMM50-201ENST00000350028 PNMA6EA0A0J9YXQ4 647 aa20.65■□□□□ 0.9
SAMM50-201ENST00000350028 PI4KAP2A4QPH2 592 aa20.65■□□□□ 0.9
SAMM50-201ENST00000350028 PI4KAP1Q8N8J0 262 aa20.65■□□□□ 0.9
SAMM50-201ENST00000350028 OTUD7AQ8TE49 926 aaPredicted RBP20.65■□□□□ 0.9
SAMM50-201ENST00000350028 KDM6AO15550 1401 aaPredicted RBP20.65■□□□□ 0.9
SAMM50-201ENST00000350028 LRRCC1Q9C099 1032 aa20.64■□□□□ 0.9
SAMM50-201ENST00000350028 HYPKQ9NX55 129 aa20.64■□□□□ 0.9
SAMM50-201ENST00000350028 PKD1L3Q7Z443 1732 aa20.64■□□□□ 0.89
SAMM50-201ENST00000350028 IBTKQ9P2D0 1353 aaPredicted RBP20.64■□□□□ 0.89
SAMM50-201ENST00000350028 HSP90AB1P08238 724 aaKnown RBP20.64■□□□□ 0.89
SAMM50-201ENST00000350028 NFKBIBQ15653 356 aa20.64■□□□□ 0.89
SAMM50-201ENST00000350028 SSH3Q8TE77 659 aa20.64■□□□□ 0.89
SAMM50-201ENST00000350028 ADCY9O60503 1353 aa20.63■□□□□ 0.89
SAMM50-201ENST00000350028 ZNF790Q6PG37 636 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms