RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 BTBD11A6QL63 1104 aa17.03■□□□□ 0.32
UBA3-201ENST00000349511 PHKG2P15735 406 aa17.03■□□□□ 0.32
UBA3-201ENST00000349511 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
UBA3-201ENST00000349511 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
UBA3-201ENST00000349511 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
UBA3-201ENST00000349511 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
UBA3-201ENST00000349511 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
UBA3-201ENST00000349511 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
UBA3-201ENST00000349511 IL2RBP14784 551 aa17.01■□□□□ 0.31
UBA3-201ENST00000349511 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
UBA3-201ENST00000349511 COL22A1Q8NFW1 1626 aaPredicted RBP17.01■□□□□ 0.31
UBA3-201ENST00000349511 IPO8O15397 1037 aaKnown RBP17■□□□□ 0.31
UBA3-201ENST00000349511 ITPRIPQ8IWB1 547 aa17■□□□□ 0.31
UBA3-201ENST00000349511 SLC4A2P04920 1241 aa17■□□□□ 0.31
UBA3-201ENST00000349511 TMEM57Q8N5G2 664 aa17■□□□□ 0.31
UBA3-201ENST00000349511 NFATC2IPQ8NCF5 419 aa17■□□□□ 0.31
UBA3-201ENST00000349511 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
UBA3-201ENST00000349511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.312e-8■■■□□ 18
UBA3-201ENST00000349511 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
UBA3-201ENST00000349511 SLC39A6Q13433 755 aa16.99■□□□□ 0.31
UBA3-201ENST00000349511 MVPQ14764 893 aaKnown RBP16.99■□□□□ 0.31
UBA3-201ENST00000349511 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
UBA3-201ENST00000349511 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
UBA3-201ENST00000349511 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
UBA3-201ENST00000349511 EIF4A1P60842 406 aaKnown RBP16.98■□□□□ 0.31
UBA3-201ENST00000349511 COL14A1Q05707 1796 aaKnown RBP16.98■□□□□ 0.31
UBA3-201ENST00000349511 BRPF1P55201 1214 aaPredicted RBP16.97■□□□□ 0.31
UBA3-201ENST00000349511 C8orf34Q49A92 452 aa16.97■□□□□ 0.31
UBA3-201ENST00000349511 G2E3Q7L622 706 aa16.97■□□□□ 0.31
UBA3-201ENST00000349511 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.31
UBA3-201ENST00000349511 BABAM1Q9NWV8 329 aa16.96■□□□□ 0.31
UBA3-201ENST00000349511 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.3
UBA3-201ENST00000349511 DCAF5Q96JK2 942 aa16.96■□□□□ 0.3
UBA3-201ENST00000349511 PKD1L3Q7Z443 1732 aa16.95■□□□□ 0.3
UBA3-201ENST00000349511 PCDH11XQ9BZA7 1347 aa16.95■□□□□ 0.3
UBA3-201ENST00000349511 PCDH11YQ9BZA8 1340 aa16.95■□□□□ 0.3
UBA3-201ENST00000349511 PARP4Q9UKK3 1724 aaKnown RBP16.95■□□□□ 0.3
UBA3-201ENST00000349511 RGS3P49796 1198 aa16.94■□□□□ 0.3
UBA3-201ENST00000349511 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
UBA3-201ENST00000349511 HDGFL1Q5TGJ6 251 aa16.94■□□□□ 0.3
UBA3-201ENST00000349511 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
UBA3-201ENST00000349511 KDM3BQ7LBC6 1761 aa16.94■□□□□ 0.3
UBA3-201ENST00000349511 CABP4P57796 275 aa16.93■□□□□ 0.3
UBA3-201ENST00000349511 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
UBA3-201ENST00000349511 C8orf37Q96NL8 207 aa16.93■□□□□ 0.3
UBA3-201ENST00000349511 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
UBA3-201ENST00000349511 PCDHB15Q9Y5E8 787 aa16.93■□□□□ 0.3
UBA3-201ENST00000349511 IGHDP01880 384 aa16.93■□□□□ 0.3
UBA3-201ENST00000349511 ARHGAP45Q92619 1136 aa16.93■□□□□ 0.3
UBA3-201ENST00000349511 PLCH1Q4KWH8 1693 aa16.93■□□□□ 0.3
UBA3-201ENST00000349511 ANXA1P04083 346 aa16.92■□□□□ 0.3
UBA3-201ENST00000349511 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
UBA3-201ENST00000349511 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
UBA3-201ENST00000349511 SIPA1L3O60292 1781 aaPredicted RBP16.92■□□□□ 0.3
UBA3-201ENST00000349511 F6X3S4 739 aa16.91■□□□□ 0.3
UBA3-201ENST00000349511 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
UBA3-201ENST00000349511 DDX19BQ9UMR2 479 aa16.91■□□□□ 0.3
UBA3-201ENST00000349511 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
UBA3-201ENST00000349511 SLC4A3P48751 1232 aa16.91■□□□□ 0.3
UBA3-201ENST00000349511 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
UBA3-201ENST00000349511 HSPA1LP34931 641 aa16.9■□□□□ 0.3
UBA3-201ENST00000349511 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
UBA3-201ENST00000349511 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
UBA3-201ENST00000349511 JCADQ9P266 1359 aa16.9■□□□□ 0.3
UBA3-201ENST00000349511 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
UBA3-201ENST00000349511 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
UBA3-201ENST00000349511 CHPF2Q9P2E5 772 aa16.9■□□□□ 0.3
UBA3-201ENST00000349511 ABCC4O15439 1325 aa16.89■□□□□ 0.29
UBA3-201ENST00000349511 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
UBA3-201ENST00000349511 FLIIQ13045 1269 aa16.89■□□□□ 0.29
UBA3-201ENST00000349511 C1orf115Q9H7X2 142 aa16.89■□□□□ 0.29
UBA3-201ENST00000349511 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
UBA3-201ENST00000349511 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
UBA3-201ENST00000349511 RGS12O14924 1447 aa16.88■□□□□ 0.29
UBA3-201ENST00000349511 TTC5Q8N0Z6 440 aa16.88■□□□□ 0.29
UBA3-201ENST00000349511 DAXXQ9UER7 740 aaPredicted RBP16.87■□□□□ 0.29
UBA3-201ENST00000349511 PTPRCP08575 1304 aa16.87■□□□□ 0.29
UBA3-201ENST00000349511 SPATA31A1Q5TZJ5 1347 aa16.87■□□□□ 0.29
UBA3-201ENST00000349511 PLEKHG2Q9H7P9 1386 aa16.87■□□□□ 0.29
UBA3-201ENST00000349511 EXOC5O00471 708 aa16.87■□□□□ 0.29
UBA3-201ENST00000349511 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
UBA3-201ENST00000349511 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
UBA3-201ENST00000349511 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
UBA3-201ENST00000349511 PROSER3Q2NL68 480 aa16.85■□□□□ 0.29
UBA3-201ENST00000349511 NRAPQ86VF7 1730 aa16.85■□□□□ 0.29
UBA3-201ENST00000349511 DISP2A7MBM2 1401 aa16.85■□□□□ 0.29
UBA3-201ENST00000349511 PIP4K2AP48426 406 aaPredicted RBP16.85■□□□□ 0.29
UBA3-201ENST00000349511 HEG1Q9ULI3 1381 aa16.85■□□□□ 0.29
UBA3-201ENST00000349511 SLIT2O94813 1529 aa16.85■□□□□ 0.29
UBA3-201ENST00000349511 PTCD1O75127 700 aaKnown RBP16.84■□□□□ 0.29
UBA3-201ENST00000349511 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
UBA3-201ENST00000349511 SOS1Q07889 1333 aaPredicted RBP16.84■□□□□ 0.29
UBA3-201ENST00000349511 A0A0G2JS52 829 aa16.84■□□□□ 0.29
UBA3-201ENST00000349511 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
UBA3-201ENST00000349511 HOXB7P09629 217 aa16.84■□□□□ 0.29
UBA3-201ENST00000349511 NFKBIBQ15653 356 aa16.84■□□□□ 0.29
UBA3-201ENST00000349511 UNC5CLQ8IV45 518 aa16.84■□□□□ 0.29
UBA3-201ENST00000349511 SYTL4Q96C24 671 aaPredicted RBP16.84■□□□□ 0.29
UBA3-201ENST00000349511 MRC1P22897 1456 aa16.84■□□□□ 0.29
UBA3-201ENST00000349511 LRP6O75581 1613 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms