RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 ERVV-2B6SEH9 535 aa16.74■□□□□ 0.27
ERGIC3-202ENST00000348547 KCNQ3O43525 872 aa16.74■□□□□ 0.27
ERGIC3-202ENST00000348547 NEFMP07197 916 aa16.74■□□□□ 0.27
ERGIC3-202ENST00000348547 ZNF853P0CG23 659 aa16.74■□□□□ 0.27
ERGIC3-202ENST00000348547 NFATC2IPQ8NCF5 419 aa16.74■□□□□ 0.27
ERGIC3-202ENST00000348547 CDCA7LQ96GN5 454 aa16.74■□□□□ 0.27
ERGIC3-202ENST00000348547 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
ERGIC3-202ENST00000348547 TJP1Q07157 1748 aa16.74■□□□□ 0.27
ERGIC3-202ENST00000348547 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
ERGIC3-202ENST00000348547 HSP90AB1P08238 724 aaKnown RBP16.72■□□□□ 0.27
ERGIC3-202ENST00000348547 CICQ96RK0 1608 aaPredicted RBP16.71■□□□□ 0.27
ERGIC3-202ENST00000348547 FAM196AQ6ZSG2 479 aa16.71■□□□□ 0.27
ERGIC3-202ENST00000348547 ASAP1Q9ULH1 1129 aa16.71■□□□□ 0.27
ERGIC3-202ENST00000348547 TRIM37O94972 964 aa16.7■□□□□ 0.26
ERGIC3-202ENST00000348547 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
ERGIC3-202ENST00000348547 SLC39A6Q13433 755 aa16.7■□□□□ 0.26
ERGIC3-202ENST00000348547 RTF1Q92541 710 aaKnown RBP16.7■□□□□ 0.26
ERGIC3-202ENST00000348547 RGPD3A6NKT7 1758 aaPredicted RBP16.7■□□□□ 0.26
ERGIC3-202ENST00000348547 RGPD4Q7Z3J3 1758 aa16.7■□□□□ 0.26
ERGIC3-202ENST00000348547 TAF1LQ8IZX4 1826 aa16.69■□□□□ 0.26
ERGIC3-202ENST00000348547 CHL1O00533 1208 aa16.69■□□□□ 0.26
ERGIC3-202ENST00000348547 CABP4P57796 275 aa16.69■□□□□ 0.26
ERGIC3-202ENST00000348547 TSR2Q969E8 191 aaKnown RBP16.69■□□□□ 0.26
ERGIC3-202ENST00000348547 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
ERGIC3-202ENST00000348547 ATG3Q9NT62 314 aa16.69■□□□□ 0.26
ERGIC3-202ENST00000348547 COL5A3P25940 1745 aaPredicted RBP16.69■□□□□ 0.26
ERGIC3-202ENST00000348547 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
ERGIC3-202ENST00000348547 KRT24Q2M2I5 525 aa16.68■□□□□ 0.26
ERGIC3-202ENST00000348547 WDR63Q8IWG1 891 aa16.68■□□□□ 0.26
ERGIC3-202ENST00000348547 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
ERGIC3-202ENST00000348547 NGEFQ8N5V2 710 aa16.68■□□□□ 0.26
ERGIC3-202ENST00000348547 SYTL4Q96C24 671 aaPredicted RBP16.68■□□□□ 0.26
ERGIC3-202ENST00000348547 MBIPQ9NS73 344 aa16.68■□□□□ 0.26
ERGIC3-202ENST00000348547 TMOD3Q9NYL9 352 aa16.68■□□□□ 0.26
ERGIC3-202ENST00000348547 IL16Q14005 1332 aa16.68■□□□□ 0.26
ERGIC3-202ENST00000348547 TEFQ10587 303 aa16.67■□□□□ 0.26
ERGIC3-202ENST00000348547 TAF7Q15545 349 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-202ENST00000348547 BCL11BQ9C0K0 894 aaPredicted RBP16.67■□□□□ 0.26
ERGIC3-202ENST00000348547 HEG1Q9ULI3 1381 aa16.67■□□□□ 0.26
ERGIC3-202ENST00000348547 RREB1Q92766 1687 aa16.67■□□□□ 0.26
ERGIC3-202ENST00000348547 LAMB4A4D0S4 1761 aa16.67■□□□□ 0.26
ERGIC3-202ENST00000348547 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
ERGIC3-202ENST00000348547 SLFN5Q08AF3 891 aa16.66■□□□□ 0.26
ERGIC3-202ENST00000348547 CFAP44Q96MT7 982 aa16.66■□□□□ 0.26
ERGIC3-202ENST00000348547 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
ERGIC3-202ENST00000348547 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
ERGIC3-202ENST00000348547 PRAMEF22A3QJZ6 481 aa16.64■□□□□ 0.26
ERGIC3-202ENST00000348547 ZNF496Q96IT1 587 aaPredicted RBP16.64■□□□□ 0.26
ERGIC3-202ENST00000348547 LAS1LQ9Y4W2 734 aaKnown RBP16.64■□□□□ 0.26
ERGIC3-202ENST00000348547 NUP188Q5SRE5 1749 aa16.64■□□□□ 0.25
ERGIC3-202ENST00000348547 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
ERGIC3-202ENST00000348547 BTBD11A6QL63 1104 aa16.64■□□□□ 0.25
ERGIC3-202ENST00000348547 KCNQ4P56696 695 aa16.64■□□□□ 0.25
ERGIC3-202ENST00000348547 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
ERGIC3-202ENST00000348547 DUSP27Q5VZP5 1158 aa16.64■□□□□ 0.25
ERGIC3-202ENST00000348547 ZNF790Q6PG37 636 aa16.64■□□□□ 0.25
ERGIC3-202ENST00000348547 EIF4A1P60842 406 aaKnown RBP16.63■□□□□ 0.25
ERGIC3-202ENST00000348547 PROM2Q8N271 834 aa16.63■□□□□ 0.25
ERGIC3-202ENST00000348547 C8orf58Q8NAV2 365 aa16.63■□□□□ 0.25
ERGIC3-202ENST00000348547 TSPYL4Q9UJ04 414 aa16.63■□□□□ 0.25
ERGIC3-202ENST00000348547 TUBGCP6Q96RT7 1819 aa16.62■□□□□ 0.25
ERGIC3-202ENST00000348547 GNAI1P63096 354 aa16.62■□□□□ 0.25
ERGIC3-202ENST00000348547 TSPYL6Q8N831 410 aa16.62■□□□□ 0.25
ERGIC3-202ENST00000348547 PTCD1O75127 700 aaKnown RBP16.61■□□□□ 0.25
ERGIC3-202ENST00000348547 ITPK1Q13572 414 aa16.61■□□□□ 0.25
ERGIC3-202ENST00000348547 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
ERGIC3-202ENST00000348547 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
ERGIC3-202ENST00000348547 E9PSI1 815 aa16.59■□□□□ 0.25
ERGIC3-202ENST00000348547 CALD1Q05682 793 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-202ENST00000348547 EXOSC9Q06265 439 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-202ENST00000348547 UPF1Q92900 1129 aaKnown RBP eCLIP16.59■□□□□ 0.25
ERGIC3-202ENST00000348547 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
ERGIC3-202ENST00000348547 SOCS7O14512 581 aa16.58■□□□□ 0.24
ERGIC3-202ENST00000348547 DEFB132Q7Z7B7 95 aa16.58■□□□□ 0.24
ERGIC3-202ENST00000348547 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
ERGIC3-202ENST00000348547 APBA3O96018 575 aa16.57■□□□□ 0.24
ERGIC3-202ENST00000348547 SIK1P57059 783 aa16.57■□□□□ 0.24
ERGIC3-202ENST00000348547 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
ERGIC3-202ENST00000348547 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
ERGIC3-202ENST00000348547 GIGYF1O75420 1035 aaPredicted RBP16.56■□□□□ 0.24
ERGIC3-202ENST00000348547 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
ERGIC3-202ENST00000348547 DNAJC10Q8IXB1 793 aa16.56■□□□□ 0.24
ERGIC3-202ENST00000348547 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
ERGIC3-202ENST00000348547 EN1Q05925 392 aaPredicted RBP16.55■□□□□ 0.24
ERGIC3-202ENST00000348547 LINC00116Q8NCU8 138 aa16.55■□□□□ 0.24
ERGIC3-202ENST00000348547 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
ERGIC3-202ENST00000348547 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
ERGIC3-202ENST00000348547 PLSCR1O15162 318 aa16.54■□□□□ 0.24
ERGIC3-202ENST00000348547 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
ERGIC3-202ENST00000348547 MYH16Q9H6N6 1097 aa16.54■□□□□ 0.24
ERGIC3-202ENST00000348547 USP16Q9Y5T5 823 aa16.54■□□□□ 0.24
ERGIC3-202ENST00000348547 EZH2Q15910 746 aaKnown RBP16.53■□□□□ 0.24
ERGIC3-202ENST00000348547 TXNRD1Q16881 649 aa16.53■□□□□ 0.24
ERGIC3-202ENST00000348547 TTC5Q8N0Z6 440 aa16.53■□□□□ 0.24
ERGIC3-202ENST00000348547 SMARCC1Q92922 1105 aaPredicted RBP16.53■□□□□ 0.24
ERGIC3-202ENST00000348547 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
ERGIC3-202ENST00000348547 CYP19A1P11511 503 aaPredicted RBP16.52■□□□□ 0.24
ERGIC3-202ENST00000348547 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
ERGIC3-202ENST00000348547 NBPF26B4DH59 902 aa16.51■□□□□ 0.23
ERGIC3-202ENST00000348547 VAMP4O75379 141 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms