RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 LRRC59Q96AG4 307 aaKnown RBP7.52□□□□□ -1.21
CLCN3-201ENST00000347613 PALD1Q9ULE6 856 aa7.52□□□□□ -1.21
CLCN3-201ENST00000347613 ZDHHC9Q9Y397 364 aa7.52□□□□□ -1.21
CLCN3-201ENST00000347613 LTN1O94822 1766 aa7.52□□□□□ -1.21
CLCN3-201ENST00000347613 SBNO1A3KN83 1393 aa7.52□□□□□ -1.21
CLCN3-201ENST00000347613 NBPF6Q5VWK0 638 aa7.52□□□□□ -1.21
CLCN3-201ENST00000347613 HSCBQ8IWL3 235 aa7.52□□□□□ -1.21
CLCN3-201ENST00000347613 DHX37Q8IY37 1157 aaKnown RBP7.52□□□□□ -1.21
CLCN3-201ENST00000347613 NBPF4Q96M43 638 aa7.52□□□□□ -1.21
CLCN3-201ENST00000347613 ARHGEF10O15013 1369 aa7.51□□□□□ -1.21
CLCN3-201ENST00000347613 AMPHP49418 695 aa7.51□□□□□ -1.21
CLCN3-201ENST00000347613 LMOD3Q0VAK6 560 aa7.51□□□□□ -1.21
CLCN3-201ENST00000347613 COL9A3Q14050 684 aaPredicted RBP7.51□□□□□ -1.21
CLCN3-201ENST00000347613 FLT4P35916 1363 aa7.51□□□□□ -1.21
CLCN3-201ENST00000347613 FER1L4A9Z1Z3 1794 aa7.51□□□□□ -1.21
CLCN3-201ENST00000347613 CDC45O75419 566 aa7.51□□□□□ -1.21
CLCN3-201ENST00000347613 USP44Q9H0E7 712 aa7.51□□□□□ -1.21
CLCN3-201ENST00000347613 TBX22Q9Y458 520 aa7.51□□□□□ -1.21
CLCN3-201ENST00000347613 ERBB4Q15303 1308 aa7.5□□□□□ -1.21
CLCN3-201ENST00000347613 K7ELQ4 463 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-201ENST00000347613 MAP4K4O95819 1239 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-201ENST00000347613 FLIIQ13045 1269 aa7.5□□□□□ -1.21
CLCN3-201ENST00000347613 ABTB2Q8N961 1025 aa7.5□□□□□ -1.21
CLCN3-201ENST00000347613 NSFL1CQ9UNZ2 370 aaKnown RBP7.5□□□□□ -1.21
CLCN3-201ENST00000347613 PDE1AP54750 535 aa7.5□□□□□ -1.21
CLCN3-201ENST00000347613 HSP90AB1P08238 724 aaKnown RBP7.5□□□□□ -1.21
CLCN3-201ENST00000347613 LRRFIP2Q9Y608 721 aaKnown RBP7.5□□□□□ -1.21
CLCN3-201ENST00000347613 KIF24Q5T7B8 1368 aa7.49□□□□□ -1.21
CLCN3-201ENST00000347613 NBPF7P0C2Y1 421 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-201ENST00000347613 HDGFP51858 240 aaKnown RBP7.49□□□□□ -1.21
CLCN3-201ENST00000347613 RPAP2Q8IXW5 612 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-201ENST00000347613 IL1RAPL2Q9NP60 686 aa7.49□□□□□ -1.21
CLCN3-201ENST00000347613 PTPRCP08575 1304 aa7.49□□□□□ -1.21
CLCN3-201ENST00000347613 AXIN2Q9Y2T1 843 aa7.49□□□□□ -1.21
CLCN3-201ENST00000347613 PROSER3Q2NL68 480 aa7.48□□□□□ -1.21
CLCN3-201ENST00000347613 PXDNQ92626 1479 aa7.48□□□□□ -1.21
CLCN3-201ENST00000347613 ZBTB7CA1YPR0 619 aa7.48□□□□□ -1.21
CLCN3-201ENST00000347613 GNAT3A8MTJ3 354 aa7.48□□□□□ -1.21
CLCN3-201ENST00000347613 FKBP5Q13451 457 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-201ENST00000347613 ORAI2Q96SN7 254 aa7.48□□□□□ -1.21
CLCN3-201ENST00000347613 TTC21AQ8NDW8 1320 aa7.48□□□□□ -1.21
CLCN3-201ENST00000347613 CYP2E1P05181 493 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-201ENST00000347613 FOXD4L5Q5VV16 416 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-201ENST00000347613 NUTM1Q86Y26 1132 aa7.48□□□□□ -1.21
CLCN3-201ENST00000347613 FOXD4L4Q8WXT5 416 aaPredicted RBP7.48□□□□□ -1.21
CLCN3-201ENST00000347613 LARP6Q9BRS8 491 aaKnown RBP7.48□□□□□ -1.21
CLCN3-201ENST00000347613 EID1Q9Y6B2 187 aa7.48□□□□□ -1.21
CLCN3-201ENST00000347613 RGPD5Q99666 1765 aa7.48□□□□□ -1.21
CLCN3-201ENST00000347613 EIF2S2P20042 333 aaKnown RBP7.47□□□□□ -1.21
CLCN3-201ENST00000347613 RTF1Q92541 710 aaKnown RBP7.47□□□□□ -1.21
CLCN3-201ENST00000347613 NFAT5O94916 1531 aa7.47□□□□□ -1.21
CLCN3-201ENST00000347613 MPRIPQ6WCQ1 1025 aa7.47□□□□□ -1.21
CLCN3-201ENST00000347613 DDX17Q92841 729 aaKnown RBP7.47□□□□□ -1.21
CLCN3-201ENST00000347613 CHD2O14647 1828 aaKnown RBP7.47□□□□□ -1.21
CLCN3-201ENST00000347613 SOS1Q07889 1333 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-201ENST00000347613 BAG4O95429 457 aaKnown RBP7.47□□□□□ -1.21
CLCN3-201ENST00000347613 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
CLCN3-201ENST00000347613 PDE4CQ08493 712 aa7.46□□□□□ -1.21
CLCN3-201ENST00000347613 CHPF2Q9P2E5 772 aa7.46□□□□□ -1.21
CLCN3-201ENST00000347613 GOLGA6L3A6NEY3 463 aa7.46□□□□□ -1.22
CLCN3-201ENST00000347613 ATP8B2P98198 1209 aa7.46□□□□□ -1.22
CLCN3-201ENST00000347613 OSBPL3Q9H4L5 887 aa7.46□□□□□ -1.22
CLCN3-201ENST00000347613 RBM27Q9P2N5 1060 aaKnown RBP7.46□□□□□ -1.22
CLCN3-201ENST00000347613 EIF4A1P60842 406 aaKnown RBP7.46□□□□□ -1.22
CLCN3-201ENST00000347613 GPT2Q8TD30 523 aa7.46□□□□□ -1.22
CLCN3-201ENST00000347613 MAP3K5Q99683 1374 aa7.46□□□□□ -1.22
CLCN3-201ENST00000347613 IBTKQ9P2D0 1353 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-201ENST00000347613 N4BP2Q86UW6 1770 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-201ENST00000347613 TCHHQ07283 1943 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 USP54Q70EL1 1684 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 KDM3BQ7LBC6 1761 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 GNAI2P04899 355 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 TAF7Q15545 349 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-201ENST00000347613 GRPEL1Q9HAV7 217 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 CEMIPQ8WUJ3 1361 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 LMBRD1Q9NUN5 540 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 CPA1P15085 419 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 CHMLP26374 656 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 PPP1R42Q7Z4L9 355 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 RILPL2Q969X0 211 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 ADCY9O60503 1353 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 MED1Q15648 1581 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-201ENST00000347613 ADAMTSL3P82987 1691 aa7.45□□□□□ -1.22
CLCN3-201ENST00000347613 PI4KAP2A4QPH2 592 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 CCT4P50991 539 aaKnown RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 ESCO1Q5FWF5 840 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 MCTP1Q6DN14 999 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 THEMISQ8N1K5 641 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 PI4KAP1Q8N8J0 262 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 PI4K2BQ8TCG2 481 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 ESYT1Q9BSJ8 1104 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 UPF3BQ9BZI7 483 aaKnown RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 BCL11BQ9C0K0 894 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 PHF8Q9UPP1 1060 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 GOLGB1Q14789 3259 aaKnown RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 CHGBP05060 677 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 MX1P20591 662 aa7.44□□□□□ -1.22
CLCN3-201ENST00000347613 PIP4K2AP48426 406 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 HAP1P54257 671 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-201ENST00000347613 FOXD4L6Q3SYB3 417 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms