RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 FLIIQ13045 1269 aa17.91■□□□□ 0.46
ARHGEF1-202ENST00000347545 PKP1Q13835 747 aa17.91■□□□□ 0.46
ARHGEF1-202ENST00000347545 PNMA6EA0A0J9YXQ4 647 aa17.91■□□□□ 0.46
ARHGEF1-202ENST00000347545 BAG4O95429 457 aaKnown RBP17.91■□□□□ 0.46
ARHGEF1-202ENST00000347545 NLRP6P59044 892 aa17.91■□□□□ 0.46
ARHGEF1-202ENST00000347545 NECTIN2Q92692 538 aa17.91■□□□□ 0.46
ARHGEF1-202ENST00000347545 HTATSF1O43719 755 aaKnown RBP17.9■□□□□ 0.46
ARHGEF1-202ENST00000347545 HMMRO75330 724 aa17.9■□□□□ 0.46
ARHGEF1-202ENST00000347545 GNAI2P04899 355 aa17.9■□□□□ 0.46
ARHGEF1-202ENST00000347545 RGPD2P0DJD1 1756 aa17.9■□□□□ 0.46
ARHGEF1-202ENST00000347545 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
ARHGEF1-202ENST00000347545 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
ARHGEF1-202ENST00000347545 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
ARHGEF1-202ENST00000347545 SKOR2Q2VWA4 1001 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF1-202ENST00000347545 STK31Q9BXU1 1019 aa17.88■□□□□ 0.45
ARHGEF1-202ENST00000347545 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
ARHGEF1-202ENST00000347545 MED1Q15648 1581 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF1-202ENST00000347545 ERC2O15083 957 aa17.88■□□□□ 0.45
ARHGEF1-202ENST00000347545 KCNA6P17658 529 aa17.88■□□□□ 0.45
ARHGEF1-202ENST00000347545 ZGPATQ8N5A5 531 aaKnown RBP17.88■□□□□ 0.45
ARHGEF1-202ENST00000347545 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
ARHGEF1-202ENST00000347545 FKBP5Q13451 457 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF1-202ENST00000347545 ISY1Q9ULR0 285 aaKnown RBP17.87■□□□□ 0.45
ARHGEF1-202ENST00000347545 IBTKQ9P2D0 1353 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF1-202ENST00000347545 CCDC30Q5VVM6 783 aa17.87■□□□□ 0.45
ARHGEF1-202ENST00000347545 CASC1Q6TDU7 716 aa17.87■□□□□ 0.45
ARHGEF1-202ENST00000347545 REC8O95072 547 aa17.86■□□□□ 0.45
ARHGEF1-202ENST00000347545 ATP8B2P98198 1209 aa17.86■□□□□ 0.45
ARHGEF1-202ENST00000347545 SETD1BQ9UPS6 1966 aaKnown RBP17.86■□□□□ 0.45
ARHGEF1-202ENST00000347545 PTMSP20962 102 aa17.86■□□□□ 0.45
ARHGEF1-202ENST00000347545 USHBP1Q8N6Y0 703 aa17.86■□□□□ 0.45
ARHGEF1-202ENST00000347545 ZDHHC9Q9Y397 364 aa17.86■□□□□ 0.45
ARHGEF1-202ENST00000347545 NFAT5O94916 1531 aa17.86■□□□□ 0.45
ARHGEF1-202ENST00000347545 LTV1Q96GA3 475 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF1-202ENST00000347545 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-202ENST00000347545 CHD2O14647 1828 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-202ENST00000347545 LRRCC1Q9C099 1032 aa17.85■□□□□ 0.45
ARHGEF1-202ENST00000347545 USP44Q9H0E7 712 aa17.84■□□□□ 0.45
ARHGEF1-202ENST00000347545 GNAI3P08754 354 aa17.84■□□□□ 0.45
ARHGEF1-202ENST00000347545 ESYT1Q9BSJ8 1104 aa17.84■□□□□ 0.45
ARHGEF1-202ENST00000347545 MX1P20591 662 aa17.83■□□□□ 0.45
ARHGEF1-202ENST00000347545 KLHL40Q2TBA0 621 aa17.83■□□□□ 0.45
ARHGEF1-202ENST00000347545 TAF7Q15545 349 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 UNC5CLQ8IV45 518 aa17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 LMO7Q8WWI1 1683 aa17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 ERBB4Q15303 1308 aa17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 ST18O60284 1047 aa17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 THEMISQ8N1K5 641 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 ABTB2Q8N961 1025 aa17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 LMBRD1Q9NUN5 540 aa17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 PALD1Q9ULE6 856 aa17.83■□□□□ 0.44
ARHGEF1-202ENST00000347545 NUCB2P80303 420 aa17.82■□□□□ 0.44
ARHGEF1-202ENST00000347545 MCTP1Q6DN14 999 aa17.82■□□□□ 0.44
ARHGEF1-202ENST00000347545 STAP2Q9UGK3 403 aa17.82■□□□□ 0.44
ARHGEF1-202ENST00000347545 CEMIPQ8WUJ3 1361 aa17.82■□□□□ 0.44
ARHGEF1-202ENST00000347545 CHAMP1Q96JM3 812 aa17.81■□□□□ 0.44
ARHGEF1-202ENST00000347545 SOS1Q07889 1333 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-202ENST00000347545 CHMLP26374 656 aa17.81■□□□□ 0.44
ARHGEF1-202ENST00000347545 IL25Q9H293 177 aa17.81■□□□□ 0.44
ARHGEF1-202ENST00000347545 BABAM1Q9NWV8 329 aa17.81■□□□□ 0.44
ARHGEF1-202ENST00000347545 CWC22Q9HCG8 908 aaKnown RBP17.8■□□□□ 0.44
ARHGEF1-202ENST00000347545 DDX49Q9Y6V7 483 aaKnown RBP17.8■□□□□ 0.44
ARHGEF1-202ENST00000347545 PHRF1Q9P1Y6 1649 aaKnown RBP17.8■□□□□ 0.44
ARHGEF1-202ENST00000347545 CRYBG1Q9Y4K1 1723 aa17.8■□□□□ 0.44
ARHGEF1-202ENST00000347545 GOLGA6L22H0YM25 854 aa17.79■□□□□ 0.44
ARHGEF1-202ENST00000347545 HDGFL1Q5TGJ6 251 aa17.78■□□□□ 0.44
ARHGEF1-202ENST00000347545 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
ARHGEF1-202ENST00000347545 CLCN1P35523 988 aa17.78■□□□□ 0.44
ARHGEF1-202ENST00000347545 LGR6Q9HBX8 967 aa17.78■□□□□ 0.44
ARHGEF1-202ENST00000347545 NEK4P51957 841 aa17.78■□□□□ 0.44
ARHGEF1-202ENST00000347545 NBPF6Q5VWK0 638 aa17.78■□□□□ 0.44
ARHGEF1-202ENST00000347545 TMX3Q96JJ7 454 aa17.78■□□□□ 0.44
ARHGEF1-202ENST00000347545 NBPF4Q96M43 638 aa17.78■□□□□ 0.44
ARHGEF1-202ENST00000347545 IL1RAPL2Q9NP60 686 aa17.77■□□□□ 0.44
ARHGEF1-202ENST00000347545 POLA2Q14181 598 aa17.77■□□□□ 0.43
ARHGEF1-202ENST00000347545 RILPL2Q969X0 211 aa17.77■□□□□ 0.43
ARHGEF1-202ENST00000347545 KCNQ3O43525 872 aa17.76■□□□□ 0.43
ARHGEF1-202ENST00000347545 UBTFL1P0CB47 393 aaPredicted RBP17.76■□□□□ 0.43
ARHGEF1-202ENST00000347545 GPT2Q8TD30 523 aa17.76■□□□□ 0.43
ARHGEF1-202ENST00000347545 IL17RAQ96F46 866 aa17.76■□□□□ 0.43
ARHGEF1-202ENST00000347545 EIF4A1P60842 406 aaKnown RBP17.76■□□□□ 0.43
ARHGEF1-202ENST00000347545 NAP1L5Q96NT1 182 aaPredicted RBP17.76■□□□□ 0.43
ARHGEF1-202ENST00000347545 IP6K1Q92551 441 aa17.75■□□□□ 0.43
ARHGEF1-202ENST00000347545 RBM33Q96EV2 1170 aaKnown RBP17.75■□□□□ 0.43
ARHGEF1-202ENST00000347545 PHF8Q9UPP1 1060 aa17.75■□□□□ 0.43
ARHGEF1-202ENST00000347545 AOX1Q06278 1338 aa17.75■□□□□ 0.43
ARHGEF1-202ENST00000347545 TRIM6-TRIM34B2RNG4 842 aa17.75■□□□□ 0.43
ARHGEF1-202ENST00000347545 ZNF445P59923 1031 aa17.75■□□□□ 0.43
ARHGEF1-202ENST00000347545 NUTM1Q86Y26 1132 aa17.75■□□□□ 0.43
ARHGEF1-202ENST00000347545 PPP1R42Q7Z4L9 355 aa17.75■□□□□ 0.43
ARHGEF1-202ENST00000347545 CUL4AQ13619 759 aa17.74■□□□□ 0.43
ARHGEF1-202ENST00000347545 ZSCAN23Q3MJ62 389 aa17.74■□□□□ 0.43
ARHGEF1-202ENST00000347545 CAVIN1Q6NZI2 390 aaKnown RBP17.74■□□□□ 0.43
ARHGEF1-202ENST00000347545 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
ARHGEF1-202ENST00000347545 PXDNQ92626 1479 aa17.74■□□□□ 0.43
ARHGEF1-202ENST00000347545 SIPA1L3O60292 1781 aaPredicted RBP17.74■□□□□ 0.43
ARHGEF1-202ENST00000347545 NBPF7P0C2Y1 421 aaPredicted RBP17.74■□□□□ 0.43
ARHGEF1-202ENST00000347545 PI4K2BQ8TCG2 481 aa17.74■□□□□ 0.43
ARHGEF1-202ENST00000347545 SRCIN1Q9C0H9 1055 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms