RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 MYL6BP14649 208 aa21.42■■□□□ 1.02
SMARCC2-202ENST00000347471 NUCB1Q02818 461 aa21.42■■□□□ 1.02
SMARCC2-202ENST00000347471 NFATC2IPQ8NCF5 419 aa21.42■■□□□ 1.02
SMARCC2-202ENST00000347471 ARXQ96QS3 562 aa21.42■■□□□ 1.02
SMARCC2-202ENST00000347471 KIF24Q5T7B8 1368 aa21.41■■□□□ 1.02
SMARCC2-202ENST00000347471 INTS3Q68E01 1043 aaKnown RBP21.41■■□□□ 1.02
SMARCC2-202ENST00000347471 SLKQ9H2G2 1235 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-202ENST00000347471 ZNF330Q9Y3S2 320 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-202ENST00000347471 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
SMARCC2-202ENST00000347471 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
SMARCC2-202ENST00000347471 OTUD7AQ8TE49 926 aaPredicted RBP21.4■■□□□ 1.02
SMARCC2-202ENST00000347471 GCC1Q96CN9 775 aa21.4■■□□□ 1.02
SMARCC2-202ENST00000347471 EIF4A1P60842 406 aaKnown RBP21.4■■□□□ 1.02
SMARCC2-202ENST00000347471 ZNF142P52746 1687 aaPredicted RBP21.39■■□□□ 1.02
SMARCC2-202ENST00000347471 CCT4P50991 539 aaKnown RBP21.39■■□□□ 1.01
SMARCC2-202ENST00000347471 TSHZ3Q63HK5 1081 aa21.39■■□□□ 1.01
SMARCC2-202ENST00000347471 MST1RQ04912 1400 aa21.39■■□□□ 1.01
SMARCC2-202ENST00000347471 CEP85Q6P2H3 762 aa21.38■■□□□ 1.01
SMARCC2-202ENST00000347471 LRRFIP2Q9Y608 721 aaKnown RBP21.38■■□□□ 1.01
SMARCC2-202ENST00000347471 GNAI2P04899 355 aa21.37■■□□□ 1.01
SMARCC2-202ENST00000347471 UBTFL1P0CB47 393 aaPredicted RBP21.37■■□□□ 1.01
SMARCC2-202ENST00000347471 HMMRO75330 724 aa21.37■■□□□ 1.01
SMARCC2-202ENST00000347471 SPG7Q9UQ90 795 aa21.37■■□□□ 1.01
SMARCC2-202ENST00000347471 TTC5Q8N0Z6 440 aa21.36■■□□□ 1.01
SMARCC2-202ENST00000347471 PROSER3Q2NL68 480 aa21.36■■□□□ 1.01
SMARCC2-202ENST00000347471 SPATA31A3Q5VYP0 1347 aa21.35■■□□□ 1.01
SMARCC2-202ENST00000347471 ANKRD44Q8N8A2 993 aa21.35■■□□□ 1.01
SMARCC2-202ENST00000347471 SRCIN1Q9C0H9 1055 aa21.34■■□□□ 1.01
SMARCC2-202ENST00000347471 OS9Q13438 667 aaPredicted RBP21.34■■□□□ 1.01
SMARCC2-202ENST00000347471 RPAP2Q8IXW5 612 aaPredicted RBP21.33■■□□□ 1.01
SMARCC2-202ENST00000347471 IL1RAPL2Q9NP60 686 aa21.33■■□□□ 1.01
SMARCC2-202ENST00000347471 PTCD1O75127 700 aaKnown RBP21.33■■□□□ 1.01
SMARCC2-202ENST00000347471 CABP4P57796 275 aa21.33■■□□□ 1.01
SMARCC2-202ENST00000347471 C9orf78Q9NZ63 289 aaPredicted RBP21.33■■□□□ 1.01
SMARCC2-202ENST00000347471 JARID2Q92833 1246 aaPredicted RBP21.32■■□□□ 1
SMARCC2-202ENST00000347471 C22orf23Q9BZE7 217 aa21.32■■□□□ 1
SMARCC2-202ENST00000347471 IFNL2Q8IZJ0 200 aa21.32■■□□□ 1
SMARCC2-202ENST00000347471 PXDNQ92626 1479 aa21.32■■□□□ 1
SMARCC2-202ENST00000347471 PNMA6EA0A0J9YXQ4 647 aa21.31■■□□□ 1
SMARCC2-202ENST00000347471 GNAI3P08754 354 aa21.31■■□□□ 1
SMARCC2-202ENST00000347471 NFAT5O94916 1531 aa21.31■■□□□ 1
SMARCC2-202ENST00000347471 CWF19L2Q2TBE0 894 aaKnown RBP21.3■■□□□ 1
SMARCC2-202ENST00000347471 DNAAF4Q8WXU2 420 aa21.3■■□□□ 1
SMARCC2-202ENST00000347471 MAP3K2Q9Y2U5 619 aa21.3■■□□□ 1
SMARCC2-202ENST00000347471 DCTPP1Q9H773 170 aa21.3■■□□□ 1
SMARCC2-202ENST00000347471 PIP4K2BP78356 416 aa21.3■■□□□ 1
SMARCC2-202ENST00000347471 RIC3Q7Z5B4 369 aa21.29■■□□□ 1
SMARCC2-202ENST00000347471 SURF6O75683 361 aaKnown RBP21.29■■□□□ 1
SMARCC2-202ENST00000347471 NBPF7P0C2Y1 421 aaPredicted RBP21.29■■□□□ 1
SMARCC2-202ENST00000347471 BECN1Q14457 450 aa21.29■■□□□ 1
SMARCC2-202ENST00000347471 DBF4Q9UBU7 674 aaPredicted RBP21.29■■□□□ 1
SMARCC2-202ENST00000347471 PHKG2P15735 406 aa21.29■■□□□ 1
SMARCC2-202ENST00000347471 SYTL4Q96C24 671 aaPredicted RBP21.29■■□□□ 1
SMARCC2-202ENST00000347471 CYP27B1O15528 508 aa21.28■■□□□ 1
SMARCC2-202ENST00000347471 GIGYF1O75420 1035 aaPredicted RBP21.28■■□□□ 1
SMARCC2-202ENST00000347471 ADAMTS2O95450 1211 aa21.28■■□□□ 1
SMARCC2-202ENST00000347471 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
SMARCC2-202ENST00000347471 NWD1Q149M9 1564 aa21.28■■□□□ 1
SMARCC2-202ENST00000347471 ZNF790Q6PG37 636 aa21.28■■□□□ 1
SMARCC2-202ENST00000347471 LARP1Q6PKG0 1096 aaKnown RBP21.28■■□□□ 1
SMARCC2-202ENST00000347471 SRGAP3O43295 1099 aa21.28■■□□□ 1
SMARCC2-202ENST00000347471 TNS3Q68CZ2 1445 aa21.27■■□□□ 1
SMARCC2-202ENST00000347471 TRIM6-TRIM34B2RNG4 842 aa21.27■■□□□ 1
SMARCC2-202ENST00000347471 LTN1O94822 1766 aa21.27■■□□□ 1
SMARCC2-202ENST00000347471 RGS12O14924 1447 aa21.27■■□□□ 1
SMARCC2-202ENST00000347471 NUTM2BA6NNL0 878 aaPredicted RBP21.27■■□□□ 1
SMARCC2-202ENST00000347471 NUTM2EB1AL46 878 aaPredicted RBP21.27■■□□□ 1
SMARCC2-202ENST00000347471 NUTM2AQ8IVF1 878 aaPredicted RBP21.27■■□□□ 1
SMARCC2-202ENST00000347471 USP44Q9H0E7 712 aa21.27■■□□□ 1
SMARCC2-202ENST00000347471 RILPL2Q969X0 211 aa21.26■□□□□ 0.99
SMARCC2-202ENST00000347471 FOXD4L1Q9NU39 408 aa21.26■□□□□ 0.99
SMARCC2-202ENST00000347471 KAT6BQ8WYB5 2073 aa21.25■□□□□ 0.99
SMARCC2-202ENST00000347471 PLEKHM2Q8IWE5 1019 aa21.25■□□□□ 0.99
SMARCC2-202ENST00000347471 SLC52A2Q9HAB3 445 aa21.25■□□□□ 0.99
SMARCC2-202ENST00000347471 RGPD1P0DJD0 1748 aa21.25■□□□□ 0.99
SMARCC2-202ENST00000347471 CEMIPQ8WUJ3 1361 aa21.25■□□□□ 0.99
SMARCC2-202ENST00000347471 PPP1R42Q7Z4L9 355 aa21.25■□□□□ 0.99
SMARCC2-202ENST00000347471 CCDC9Q9Y3X0 531 aaKnown RBP21.25■□□□□ 0.99
SMARCC2-202ENST00000347471 USP16Q9Y5T5 823 aa21.25■□□□□ 0.99
SMARCC2-202ENST00000347471 MAP4K4O95819 1239 aaPredicted RBP21.24■□□□□ 0.99
SMARCC2-202ENST00000347471 TBC1D9Q6ZT07 1266 aa21.24■□□□□ 0.99
SMARCC2-202ENST00000347471 NUTM1Q86Y26 1132 aa21.24■□□□□ 0.99
SMARCC2-202ENST00000347471 BTG4Q9NY30 223 aa21.24■□□□□ 0.99
SMARCC2-202ENST00000347471 ZCRB1Q8TBF4 217 aaKnown RBP21.23■□□□□ 0.99
SMARCC2-202ENST00000347471 TBC1D32Q96NH3 1257 aa21.23■□□□□ 0.99
SMARCC2-202ENST00000347471 HSP90AA1P07900 732 aaKnown RBP21.23■□□□□ 0.99
SMARCC2-202ENST00000347471 BMP2KLQ5H9B9 411 aa21.22■□□□□ 0.99
SMARCC2-202ENST00000347471 COPS6Q7L5N1 327 aa21.22■□□□□ 0.99
SMARCC2-202ENST00000347471 XAGE3Q8WTP9 111 aa21.22■□□□□ 0.99
SMARCC2-202ENST00000347471 GSPT1P15170 499 aaKnown RBP21.22■□□□□ 0.99
SMARCC2-202ENST00000347471 LRRCC1Q9C099 1032 aa21.22■□□□□ 0.99
SMARCC2-202ENST00000347471 BABAM1Q9NWV8 329 aa21.22■□□□□ 0.99
SMARCC2-202ENST00000347471 ATP5J2-PTCD1G3V325 749 aa21.21■□□□□ 0.99
SMARCC2-202ENST00000347471 SIL1Q9H173 461 aa21.21■□□□□ 0.99
SMARCC2-202ENST00000347471 DDX58O95786 925 aaKnown RBP21.2■□□□□ 0.98
SMARCC2-202ENST00000347471 DCAF5Q96JK2 942 aa21.2■□□□□ 0.98
SMARCC2-202ENST00000347471 CHMP3Q9Y3E7 222 aa21.2■□□□□ 0.98
SMARCC2-202ENST00000347471 LMTK3Q96Q04 1460 aa21.2■□□□□ 0.98
SMARCC2-202ENST00000347471 MYD88Q99836 296 aa21.2■□□□□ 0.98
SMARCC2-202ENST00000347471 MEGF6O75095 1541 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms