RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PNNQ9H307 717 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-201ENST00000346501 ATF5Q9Y2D1 282 aaPredicted RBP21.02■□□□□ 0.96
TSPAN4-201ENST00000346501 KDM6AO15550 1401 aaPredicted RBP21.02■□□□□ 0.96
TSPAN4-201ENST00000346501 PRKAR2BP31323 418 aa21.01■□□□□ 0.95
TSPAN4-201ENST00000346501 RNMTO43148 476 aaKnown RBP21■□□□□ 0.95
TSPAN4-201ENST00000346501 PDGFDQ9GZP0 370 aaPredicted RBP21■□□□□ 0.95
TSPAN4-201ENST00000346501 GNAT3A8MTJ3 354 aa20.99■□□□□ 0.95
TSPAN4-201ENST00000346501 POLD1P28340 1107 aa20.99■□□□□ 0.95
TSPAN4-201ENST00000346501 SLC52A2Q9HAB3 445 aa20.99■□□□□ 0.95
TSPAN4-201ENST00000346501 CASZ1Q86V15 1759 aa20.98■□□□□ 0.95
TSPAN4-201ENST00000346501 TEFQ10587 303 aa20.98■□□□□ 0.95
TSPAN4-201ENST00000346501 RSPH6AQ9H0K4 717 aa20.98■□□□□ 0.95
TSPAN4-201ENST00000346501 PNPLA7Q6ZV29 1317 aa20.98■□□□□ 0.95
TSPAN4-201ENST00000346501 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
TSPAN4-201ENST00000346501 C5P01031 1676 aa20.97■□□□□ 0.95
TSPAN4-201ENST00000346501 DCAF8L1A6NGE4 600 aa20.97■□□□□ 0.95
TSPAN4-201ENST00000346501 RTF1Q92541 710 aaKnown RBP20.97■□□□□ 0.95
TSPAN4-201ENST00000346501 PTCD1O75127 700 aaKnown RBP20.96■□□□□ 0.95
TSPAN4-201ENST00000346501 LGR6Q9HBX8 967 aa20.96■□□□□ 0.95
TSPAN4-201ENST00000346501 MYBBP1AQ9BQG0 1328 aaKnown RBP20.96■□□□□ 0.95
TSPAN4-201ENST00000346501 QSER1Q2KHR3 1735 aa20.95■□□□□ 0.94
TSPAN4-201ENST00000346501 TTC5Q8N0Z6 440 aa20.94■□□□□ 0.94
TSPAN4-201ENST00000346501 SCN11AQ9UI33 1791 aa20.94■□□□□ 0.94
TSPAN4-201ENST00000346501 GNPATO15228 680 aa20.93■□□□□ 0.94
TSPAN4-201ENST00000346501 SSFA2P28290 1259 aa20.93■□□□□ 0.94
TSPAN4-201ENST00000346501 PHF14O94880 888 aa20.92■□□□□ 0.94
TSPAN4-201ENST00000346501 COL23A1Q86Y22 540 aaPredicted RBP20.92■□□□□ 0.94
TSPAN4-201ENST00000346501 LINC00116Q8NCU8 138 aa20.92■□□□□ 0.94
TSPAN4-201ENST00000346501 PHACTR3Q96KR7 559 aa20.92■□□□□ 0.94
TSPAN4-201ENST00000346501 ARXQ96QS3 562 aa20.92■□□□□ 0.94
TSPAN4-201ENST00000346501 RTCBQ9Y3I0 505 aaKnown RBP20.92■□□□□ 0.94
TSPAN4-201ENST00000346501 MAPK8IP3Q9UPT6 1336 aa20.92■□□□□ 0.94
TSPAN4-201ENST00000346501 C4BP0C0L5 1744 aa20.92■□□□□ 0.94
TSPAN4-201ENST00000346501 TAF1LQ8IZX4 1826 aa20.92■□□□□ 0.94
TSPAN4-201ENST00000346501 ZNF316A6NFI3 1004 aaPredicted RBP20.91■□□□□ 0.94
TSPAN4-201ENST00000346501 PTGER2P43116 358 aa20.91■□□□□ 0.94
TSPAN4-201ENST00000346501 ITPK1Q13572 414 aa20.91■□□□□ 0.94
TSPAN4-201ENST00000346501 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-201ENST00000346501 RC3H1Q5TC82 1133 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-201ENST00000346501 MRC1P22897 1456 aa20.88■□□□□ 0.93
TSPAN4-201ENST00000346501 CNTNAP4Q9C0A0 1308 aa20.88■□□□□ 0.93
TSPAN4-201ENST00000346501 HTATSF1O43719 755 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-201ENST00000346501 WDR43Q15061 677 aaKnown RBP eCLIP20.88■□□□□ 0.93
TSPAN4-201ENST00000346501 TRAPPC3LQ5T215 181 aa20.88■□□□□ 0.93
TSPAN4-201ENST00000346501 IL17REQ8NFR9 667 aa20.88■□□□□ 0.93
TSPAN4-201ENST00000346501 ZNF831Q5JPB2 1677 aa20.87■□□□□ 0.93
TSPAN4-201ENST00000346501 ADRA2BP18089 450 aa20.87■□□□□ 0.93
TSPAN4-201ENST00000346501 SLC39A6Q13433 755 aa20.87■□□□□ 0.93
TSPAN4-201ENST00000346501 TUBGCP6Q96RT7 1819 aa20.86■□□□□ 0.93
TSPAN4-201ENST00000346501 KLHL34Q8N239 644 aa20.86■□□□□ 0.93
TSPAN4-201ENST00000346501 SGIP1Q9BQI5 828 aa20.86■□□□□ 0.93
TSPAN4-201ENST00000346501 PRKRIP1Q9H875 184 aaPredicted RBP20.86■□□□□ 0.93
TSPAN4-201ENST00000346501 RPS6KA4O75676 772 aa20.85■□□□□ 0.93
TSPAN4-201ENST00000346501 VSIG10Q8N0Z9 540 aa20.85■□□□□ 0.93
TSPAN4-201ENST00000346501 SLC4A9Q96Q91 983 aa20.85■□□□□ 0.93
TSPAN4-201ENST00000346501 BTBD11A6QL63 1104 aa20.84■□□□□ 0.93
TSPAN4-201ENST00000346501 RFC4P35249 363 aa20.84■□□□□ 0.93
TSPAN4-201ENST00000346501 MSL1Q68DK7 614 aa20.84■□□□□ 0.93
TSPAN4-201ENST00000346501 TEX13AQ9BXU3 409 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-201ENST00000346501 FHDC1Q9C0D6 1143 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-201ENST00000346501 ADAMTS7Q9UKP4 1686 aa20.83■□□□□ 0.93
TSPAN4-201ENST00000346501 VIRMAQ69YN4 1812 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-201ENST00000346501 STARD3NLO95772 234 aa20.83■□□□□ 0.93
TSPAN4-201ENST00000346501 CRKLP46109 303 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-201ENST00000346501 ZNF790Q6PG37 636 aa20.83■□□□□ 0.93
TSPAN4-201ENST00000346501 CEMIPQ8WUJ3 1361 aa20.83■□□□□ 0.92
TSPAN4-201ENST00000346501 MCM10Q7L590 875 aa20.82■□□□□ 0.92
TSPAN4-201ENST00000346501 FMNL2Q96PY5 1086 aa20.82■□□□□ 0.92
TSPAN4-201ENST00000346501 UBR3Q6ZT12 1888 aa20.81■□□□□ 0.92
TSPAN4-201ENST00000346501 NFE2L2Q16236 605 aa20.81■□□□□ 0.92
TSPAN4-201ENST00000346501 NPM2Q86SE8 214 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-201ENST00000346501 DNAJC10Q8IXB1 793 aa20.81■□□□□ 0.92
TSPAN4-201ENST00000346501 SYT17Q9BSW7 474 aa20.81■□□□□ 0.92
TSPAN4-201ENST00000346501 CCDC87Q9NVE4 849 aa20.81■□□□□ 0.92
TSPAN4-201ENST00000346501 NLGN1Q8N2Q7 840 aa20.8■□□□□ 0.92
TSPAN4-201ENST00000346501 PLEKHF1Q96S99 279 aa20.8■□□□□ 0.92
TSPAN4-201ENST00000346501 LMOD3Q0VAK6 560 aa20.79■□□□□ 0.92
TSPAN4-201ENST00000346501 PNISRQ8TF01 805 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-201ENST00000346501 ANP32CO43423 234 aa20.78■□□□□ 0.92
TSPAN4-201ENST00000346501 TAF7Q15545 349 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-201ENST00000346501 SMIM5Q71RC9 77 aa20.78■□□□□ 0.92
TSPAN4-201ENST00000346501 ARHGEF1Q92888 912 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-201ENST00000346501 CYP19A1P11511 503 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-201ENST00000346501 DCTN1Q14203 1278 aa20.77■□□□□ 0.92
TSPAN4-201ENST00000346501 AMIGO3Q86WK7 504 aa20.77■□□□□ 0.92
TSPAN4-201ENST00000346501 ZNF496Q96IT1 587 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-201ENST00000346501 COL5A3P25940 1745 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-201ENST00000346501 HEG1Q9ULI3 1381 aa20.76■□□□□ 0.91
TSPAN4-201ENST00000346501 ZPR1O75312 459 aa20.76■□□□□ 0.91
TSPAN4-201ENST00000346501 CICQ96RK0 1608 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-201ENST00000346501 KCPQ6ZWJ8 1503 aa20.75■□□□□ 0.91
TSPAN4-201ENST00000346501 RIPK4P57078 832 aa20.75■□□□□ 0.91
TSPAN4-201ENST00000346501 INTS5Q6P9B9 1019 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-201ENST00000346501 RUNDC1Q96C34 613 aa20.74■□□□□ 0.91
TSPAN4-201ENST00000346501 TJP1Q07157 1748 aa20.73■□□□□ 0.91
TSPAN4-201ENST00000346501 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
TSPAN4-201ENST00000346501 A0A087WZG4 1122 aa20.73■□□□□ 0.91
TSPAN4-201ENST00000346501 CD2APQ9Y5K6 639 aa20.73■□□□□ 0.91
TSPAN4-201ENST00000346501 MMP10P09238 476 aa20.72■□□□□ 0.91
TSPAN4-201ENST00000346501 SNRPA1P09661 255 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms