RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 EXOC6BQ9Y2D4 811 aa28.31■■■□□ 2.12
NKX2-3-201ENST00000344586 PLEKHG1Q9ULL1 1385 aa28.31■■■□□ 2.12
NKX2-3-201ENST00000344586 TTC21AQ8NDW8 1320 aa28.3■■■□□ 2.12
NKX2-3-201ENST00000344586 TSHZ3Q63HK5 1081 aa28.3■■■□□ 2.12
NKX2-3-201ENST00000344586 PTPRUQ92729 1446 aa28.3■■■□□ 2.12
NKX2-3-201ENST00000344586 NCLP19338 710 aaKnown RBP28.3■■■□□ 2.12
NKX2-3-201ENST00000344586 IGSF1Q8N6C5 1336 aa28.29■■■□□ 2.12
NKX2-3-201ENST00000344586 GPT2Q8TD30 523 aa28.28■■■□□ 2.12
NKX2-3-201ENST00000344586 ESYT1Q9BSJ8 1104 aa28.28■■■□□ 2.12
NKX2-3-201ENST00000344586 PRPF40AO75400 957 aaKnown RBP28.27■■■□□ 2.12
NKX2-3-201ENST00000344586 STK31Q9BXU1 1019 aa28.27■■■□□ 2.12
NKX2-3-201ENST00000344586 LRRCC1Q9C099 1032 aa28.27■■■□□ 2.12
NKX2-3-201ENST00000344586 LTKP29376 864 aa28.27■■■□□ 2.12
NKX2-3-201ENST00000344586 UBE2Q2Q8WVN8 375 aa28.27■■■□□ 2.12
NKX2-3-201ENST00000344586 ANP32BQ92688 251 aaKnown RBP28.27■■■□□ 2.12
NKX2-3-201ENST00000344586 EYA1Q99502 592 aa28.27■■■□□ 2.12
NKX2-3-201ENST00000344586 N4BP2Q86UW6 1770 aaPredicted RBP28.26■■■□□ 2.11
NKX2-3-201ENST00000344586 MX1P20591 662 aa28.25■■■□□ 2.11
NKX2-3-201ENST00000344586 NEK4P51957 841 aa28.25■■■□□ 2.11
NKX2-3-201ENST00000344586 FLIIQ13045 1269 aa28.25■■■□□ 2.11
NKX2-3-201ENST00000344586 TMX3Q96JJ7 454 aa28.25■■■□□ 2.11
NKX2-3-201ENST00000344586 PIK3C2AO00443 1686 aa28.25■■■□□ 2.11
NKX2-3-201ENST00000344586 PNMA6EA0A0J9YXQ4 647 aa28.25■■■□□ 2.11
NKX2-3-201ENST00000344586 CHAMP1Q96JM3 812 aa28.24■■■□□ 2.11
NKX2-3-201ENST00000344586 RBSNQ9H1K0 784 aa28.24■■■□□ 2.11
NKX2-3-201ENST00000344586 GNAI3P08754 354 aa28.23■■■□□ 2.11
NKX2-3-201ENST00000344586 RBM27Q9P2N5 1060 aaKnown RBP28.23■■■□□ 2.11
NKX2-3-201ENST00000344586 ZSCAN30Q86W11 494 aa28.23■■■□□ 2.11
NKX2-3-201ENST00000344586 ATP8B2P98198 1209 aa28.22■■■□□ 2.11
NKX2-3-201ENST00000344586 FKBP5Q13451 457 aaPredicted RBP28.22■■■□□ 2.11
NKX2-3-201ENST00000344586 PALD1Q9ULE6 856 aa28.22■■■□□ 2.11
NKX2-3-201ENST00000344586 HTATSF1O43719 755 aaKnown RBP28.22■■■□□ 2.11
NKX2-3-201ENST00000344586 CCDC30Q5VVM6 783 aa28.22■■■□□ 2.11
NKX2-3-201ENST00000344586 CHMLP26374 656 aa28.21■■■□□ 2.11
NKX2-3-201ENST00000344586 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
NKX2-3-201ENST00000344586 MCM2P49736 904 aa28.21■■■□□ 2.11
NKX2-3-201ENST00000344586 AMPHP49418 695 aa28.2■■■□□ 2.11
NKX2-3-201ENST00000344586 STAP2Q9UGK3 403 aa28.2■■■□□ 2.11
NKX2-3-201ENST00000344586 PXDNLA1KZ92 1463 aa28.2■■■□□ 2.1
NKX2-3-201ENST00000344586 CUL4AQ13619 759 aa28.2■■■□□ 2.1
NKX2-3-201ENST00000344586 DIP2AQ14689 1571 aa28.19■■■□□ 2.1
NKX2-3-201ENST00000344586 NWD1Q149M9 1564 aa28.19■■■□□ 2.1
NKX2-3-201ENST00000344586 MCCP23508 829 aa28.19■■■□□ 2.1
NKX2-3-201ENST00000344586 ANAPC15P60006 121 aa28.19■■■□□ 2.1
NKX2-3-201ENST00000344586 SLC26A8Q96RN1 970 aa28.19■■■□□ 2.1
NKX2-3-201ENST00000344586 TMEM63CQ9P1W3 806 aa28.19■■■□□ 2.1
NKX2-3-201ENST00000344586 BRD1O95696 1058 aa28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 NECTIN2Q92692 538 aa28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 IL17RAQ96F46 866 aa28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 NSFL1CQ9UNZ2 370 aaKnown RBP28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 LRRFIP2Q9Y608 721 aaKnown RBP28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 RGPD8O14715 1765 aaPredicted RBP28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 GNAT3A8MTJ3 354 aa28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 RILPL2Q969X0 211 aa28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 PDLIM2Q96JY6 352 aa28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 ANO2Q9NQ90 1003 aa28.17■■■□□ 2.1
NKX2-3-201ENST00000344586 FOXD4L5Q5VV16 416 aaPredicted RBP28.16■■■□□ 2.1
NKX2-3-201ENST00000344586 FOXD4L4Q8WXT5 416 aaPredicted RBP28.16■■■□□ 2.1
NKX2-3-201ENST00000344586 TRIM6-TRIM34B2RNG4 842 aa28.15■■■□□ 2.1
NKX2-3-201ENST00000344586 UNC5CLQ8IV45 518 aa28.15■■■□□ 2.1
NKX2-3-201ENST00000344586 NGDNQ8NEJ9 315 aaKnown RBP28.15■■■□□ 2.1
NKX2-3-201ENST00000344586 SRCIN1Q9C0H9 1055 aa28.15■■■□□ 2.1
NKX2-3-201ENST00000344586 MARF1Q9Y4F3 1742 aaKnown RBP28.14■■■□□ 2.1
NKX2-3-201ENST00000344586 AOX1Q06278 1338 aa28.14■■■□□ 2.1
NKX2-3-201ENST00000344586 SOS1Q07889 1333 aaPredicted RBP28.14■■■□□ 2.1
NKX2-3-201ENST00000344586 HS1BP3Q53T59 392 aa28.14■■■□□ 2.09
NKX2-3-201ENST00000344586 LRSAM1Q6UWE0 723 aa28.14■■■□□ 2.09
NKX2-3-201ENST00000344586 INTS4Q96HW7 963 aaKnown RBP28.14■■■□□ 2.09
NKX2-3-201ENST00000344586 AMOTL2Q9Y2J4 779 aa28.14■■■□□ 2.09
NKX2-3-201ENST00000344586 MAP3K5Q99683 1374 aa28.14■■■□□ 2.09
NKX2-3-201ENST00000344586 USP44Q9H0E7 712 aa28.12■■■□□ 2.09
NKX2-3-201ENST00000344586 CACNA1FO60840 1977 aa28.12■■■□□ 2.09
NKX2-3-201ENST00000344586 KIF13AQ9H1H9 1805 aa28.12■■■□□ 2.09
NKX2-3-201ENST00000344586 MBD3O95983 291 aa28.12■■■□□ 2.09
NKX2-3-201ENST00000344586 IL17REQ8NFR9 667 aa28.12■■■□□ 2.09
NKX2-3-201ENST00000344586 SYCE3A1L190 88 aa28.11■■■□□ 2.09
NKX2-3-201ENST00000344586 MSNP26038 577 aaKnown RBP28.11■■■□□ 2.09
NKX2-3-201ENST00000344586 NOL8Q76FK4 1167 aaKnown RBP28.11■■■□□ 2.09
NKX2-3-201ENST00000344586 HOXC9P31274 260 aa28.1■■■□□ 2.09
NKX2-3-201ENST00000344586 IL25Q9H293 177 aa28.1■■■□□ 2.09
NKX2-3-201ENST00000344586 TPM2P07951 284 aa28.09■■■□□ 2.09
NKX2-3-201ENST00000344586 UBTFL1P0CB47 393 aaPredicted RBP28.09■■■□□ 2.09
NKX2-3-201ENST00000344586 SSH3Q8TE77 659 aa28.09■■■□□ 2.09
NKX2-3-201ENST00000344586 BABAM1Q9NWV8 329 aa28.09■■■□□ 2.09
NKX2-3-201ENST00000344586 USP54Q70EL1 1684 aa28.08■■■□□ 2.09
NKX2-3-201ENST00000344586 OFD1O75665 1012 aa28.07■■■□□ 2.08
NKX2-3-201ENST00000344586 UPF3BQ9BZI7 483 aaKnown RBP28.07■■■□□ 2.08
NKX2-3-201ENST00000344586 IL1RAPL2Q9NP60 686 aa28.07■■■□□ 2.08
NKX2-3-201ENST00000344586 NLRP6P59044 892 aa28.07■■■□□ 2.08
NKX2-3-201ENST00000344586 TAF7Q15545 349 aaPredicted RBP28.07■■■□□ 2.08
NKX2-3-201ENST00000344586 SLIT1O75093 1534 aa28.06■■■□□ 2.08
NKX2-3-201ENST00000344586 RRP9O43818 475 aaKnown RBP28.06■■■□□ 2.08
NKX2-3-201ENST00000344586 NOL7Q9UMY1 257 aaKnown RBP28.06■■■□□ 2.08
NKX2-3-201ENST00000344586 ARHGAP23Q9P227 1491 aa28.06■■■□□ 2.08
NKX2-3-201ENST00000344586 EPB41L2O43491 1005 aaKnown RBP28.06■■■□□ 2.08
NKX2-3-201ENST00000344586 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.06■■■□□ 2.08
NKX2-3-201ENST00000344586 KIAA1211Q6ZU35 1233 aa28.05■■■□□ 2.08
NKX2-3-201ENST00000344586 EID1Q9Y6B2 187 aa28.05■■■□□ 2.08
NKX2-3-201ENST00000344586 HSPA4P34932 840 aa28.04■■■□□ 2.08
NKX2-3-201ENST00000344586 NUTM1Q86Y26 1132 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms