RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 PDE1AP54750 535 aa26.44■■□□□ 1.82
CCDC38-201ENST00000344280 PHAXQ9H814 394 aaKnown RBP26.44■■□□□ 1.82
CCDC38-201ENST00000344280 NFAT5O94916 1531 aa26.44■■□□□ 1.82
CCDC38-201ENST00000344280 LGR6Q9HBX8 967 aa26.44■■□□□ 1.82
CCDC38-201ENST00000344280 PSME1Q06323 249 aa26.43■■□□□ 1.82
CCDC38-201ENST00000344280 PLEKHG5O94827 1062 aa26.42■■□□□ 1.82
CCDC38-201ENST00000344280 RAB3GAP1Q15042 981 aa26.42■■□□□ 1.82
CCDC38-201ENST00000344280 HDGFL1Q5TGJ6 251 aa26.42■■□□□ 1.82
CCDC38-201ENST00000344280 ARXQ96QS3 562 aa26.42■■□□□ 1.82
CCDC38-201ENST00000344280 CIZ1Q9ULV3 898 aaPredicted RBP26.42■■□□□ 1.82
CCDC38-201ENST00000344280 LRRC59Q96AG4 307 aaKnown RBP26.41■■□□□ 1.82
CCDC38-201ENST00000344280 OSBPL3Q9H4L5 887 aa26.41■■□□□ 1.82
CCDC38-201ENST00000344280 LRRFIP2Q9Y608 721 aaKnown RBP26.41■■□□□ 1.82
CCDC38-201ENST00000344280 CEMIPQ8WUJ3 1361 aa26.41■■□□□ 1.82
CCDC38-201ENST00000344280 GNAI3P08754 354 aa26.41■■□□□ 1.82
CCDC38-201ENST00000344280 XPCQ01831 940 aaPredicted RBP26.4■■□□□ 1.82
CCDC38-201ENST00000344280 USP44Q9H0E7 712 aa26.4■■□□□ 1.82
CCDC38-201ENST00000344280 BABAM1Q9NWV8 329 aa26.4■■□□□ 1.82
CCDC38-201ENST00000344280 ATP8B2P98198 1209 aa26.4■■□□□ 1.82
CCDC38-201ENST00000344280 RABEP1Q15276 862 aa26.39■■□□□ 1.82
CCDC38-201ENST00000344280 SALL3Q9BXA9 1300 aa26.39■■□□□ 1.81
CCDC38-201ENST00000344280 DDX11L8A8MPP1 907 aa26.38■■□□□ 1.81
CCDC38-201ENST00000344280 KCNQ3O43525 872 aa26.38■■□□□ 1.81
CCDC38-201ENST00000344280 EIF2S2P20042 333 aaKnown RBP26.38■■□□□ 1.81
CCDC38-201ENST00000344280 ADGRL3Q9HAR2 1447 aa26.38■■□□□ 1.81
CCDC38-201ENST00000344280 CASC1Q6TDU7 716 aa26.37■■□□□ 1.81
CCDC38-201ENST00000344280 ORAI2Q96SN7 254 aa26.37■■□□□ 1.81
CCDC38-201ENST00000344280 LRRCC1Q9C099 1032 aa26.37■■□□□ 1.81
CCDC38-201ENST00000344280 RGPD2P0DJD1 1756 aa26.37■■□□□ 1.81
CCDC38-201ENST00000344280 CACNA1FO60840 1977 aa26.37■■□□□ 1.81
CCDC38-201ENST00000344280 SOS1Q07889 1333 aaPredicted RBP26.37■■□□□ 1.81
CCDC38-201ENST00000344280 EIF4A1P60842 406 aaKnown RBP26.36■■□□□ 1.81
CCDC38-201ENST00000344280 IBTKQ9P2D0 1353 aaPredicted RBP26.35■■□□□ 1.81
CCDC38-201ENST00000344280 EIF5BO60841 1220 aaKnown RBP26.35■■□□□ 1.81
CCDC38-201ENST00000344280 FSD2A1L4K1 749 aa26.34■■□□□ 1.81
CCDC38-201ENST00000344280 SSFA2P28290 1259 aa26.34■■□□□ 1.81
CCDC38-201ENST00000344280 ERC2O15083 957 aa26.33■■□□□ 1.81
CCDC38-201ENST00000344280 MX1P20591 662 aa26.33■■□□□ 1.81
CCDC38-201ENST00000344280 MPRIPQ6WCQ1 1025 aa26.33■■□□□ 1.81
CCDC38-201ENST00000344280 KCNH5Q8NCM2 988 aa26.33■■□□□ 1.81
CCDC38-201ENST00000344280 CHPF2Q9P2E5 772 aa26.33■■□□□ 1.81
CCDC38-201ENST00000344280 MED1Q15648 1581 aaPredicted RBP26.33■■□□□ 1.81
CCDC38-201ENST00000344280 UBTFL1P0CB47 393 aaPredicted RBP26.32■■□□□ 1.8
CCDC38-201ENST00000344280 PXDNLA1KZ92 1463 aa26.32■■□□□ 1.8
CCDC38-201ENST00000344280 REC8O95072 547 aa26.32■■□□□ 1.8
CCDC38-201ENST00000344280 ANXA1P04083 346 aa26.32■■□□□ 1.8
CCDC38-201ENST00000344280 L1TD1Q5T7N2 865 aaKnown RBP26.32■■□□□ 1.8
CCDC38-201ENST00000344280 XRCC6P12956 609 aaKnown RBP eCLIP26.31■■□□□ 1.8
CCDC38-201ENST00000344280 ZNF142P52746 1687 aaPredicted RBP26.31■■□□□ 1.8
CCDC38-201ENST00000344280 N4BP2Q86UW6 1770 aaPredicted RBP26.31■■□□□ 1.8
CCDC38-201ENST00000344280 GOLGA6L3A6NEY3 463 aa26.31■■□□□ 1.8
CCDC38-201ENST00000344280 GCP02774 474 aa26.31■■□□□ 1.8
CCDC38-201ENST00000344280 ZNF530Q6P9A1 599 aaPredicted RBP26.31■■□□□ 1.8
CCDC38-201ENST00000344280 GBP4Q96PP9 640 aa26.31■■□□□ 1.8
CCDC38-201ENST00000344280 AK9Q5TCS8 1911 aa26.3■■□□□ 1.8
CCDC38-201ENST00000344280 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
CCDC38-201ENST00000344280 IL1RAPL2Q9NP60 686 aa26.29■■□□□ 1.8
CCDC38-201ENST00000344280 TUBGCP6Q96RT7 1819 aa26.28■■□□□ 1.8
CCDC38-201ENST00000344280 NBPF7P0C2Y1 421 aaPredicted RBP26.28■■□□□ 1.8
CCDC38-201ENST00000344280 ARHGEF25Q86VW2 580 aa26.28■■□□□ 1.8
CCDC38-201ENST00000344280 UNC5CLQ8IV45 518 aa26.28■■□□□ 1.8
CCDC38-201ENST00000344280 SRCIN1Q9C0H9 1055 aa26.28■■□□□ 1.8
CCDC38-201ENST00000344280 PXDNQ92626 1479 aa26.28■■□□□ 1.8
CCDC38-201ENST00000344280 BTBD11A6QL63 1104 aa26.27■■□□□ 1.8
CCDC38-201ENST00000344280 AKAP4Q5JQC9 854 aa26.27■■□□□ 1.8
CCDC38-201ENST00000344280 PPP1R42Q7Z4L9 355 aa26.27■■□□□ 1.8
CCDC38-201ENST00000344280 SSH3Q8TE77 659 aa26.27■■□□□ 1.8
CCDC38-201ENST00000344280 PI4KAP2A4QPH2 592 aa26.27■■□□□ 1.8
CCDC38-201ENST00000344280 TEFQ10587 303 aa26.27■■□□□ 1.8
CCDC38-201ENST00000344280 PI4KAP1Q8N8J0 262 aa26.27■■□□□ 1.8
CCDC38-201ENST00000344280 KDM3BQ7LBC6 1761 aa26.27■■□□□ 1.8
CCDC38-201ENST00000344280 RILPL2Q969X0 211 aa26.26■■□□□ 1.79
CCDC38-201ENST00000344280 PANK2Q9BZ23 570 aa26.26■■□□□ 1.79
CCDC38-201ENST00000344280 ESYT1Q9BSJ8 1104 aa26.26■■□□□ 1.79
CCDC38-201ENST00000344280 TRIM6-TRIM34B2RNG4 842 aa26.25■■□□□ 1.79
CCDC38-201ENST00000344280 PKP1Q13835 747 aa26.25■■□□□ 1.79
CCDC38-201ENST00000344280 AXIN2Q9Y2T1 843 aa26.25■■□□□ 1.79
CCDC38-201ENST00000344280 NPHP4O75161 1426 aaPredicted RBP26.25■■□□□ 1.79
CCDC38-201ENST00000344280 PLEKHO1Q53GL0 409 aaPredicted RBP26.25■■□□□ 1.79
CCDC38-201ENST00000344280 BEND3Q5T5X7 828 aa26.25■■□□□ 1.79
CCDC38-201ENST00000344280 STAP2Q9UGK3 403 aa26.25■■□□□ 1.79
CCDC38-201ENST00000344280 ZGPATQ8N5A5 531 aaKnown RBP26.24■■□□□ 1.79
CCDC38-201ENST00000344280 PHRF1Q9P1Y6 1649 aaKnown RBP26.24■■□□□ 1.79
CCDC38-201ENST00000344280 LMO7Q8WWI1 1683 aa26.24■■□□□ 1.79
CCDC38-201ENST00000344280 CHMLP26374 656 aa26.23■■□□□ 1.79
CCDC38-201ENST00000344280 NUTM1Q86Y26 1132 aa26.23■■□□□ 1.79
CCDC38-201ENST00000344280 DNAAF4Q8WXU2 420 aa26.23■■□□□ 1.79
CCDC38-201ENST00000344280 ST18O60284 1047 aa26.23■■□□□ 1.79
CCDC38-201ENST00000344280 HOXB7P09629 217 aa26.23■■□□□ 1.79
CCDC38-201ENST00000344280 POLA2Q14181 598 aa26.23■■□□□ 1.79
CCDC38-201ENST00000344280 ANKRD24Q8TF21 1146 aa26.23■■□□□ 1.79
CCDC38-201ENST00000344280 RNMTO43148 476 aaKnown RBP26.22■■□□□ 1.79
CCDC38-201ENST00000344280 SURF6O75683 361 aaKnown RBP26.22■■□□□ 1.79
CCDC38-201ENST00000344280 ADCY9O60503 1353 aa26.21■■□□□ 1.79
CCDC38-201ENST00000344280 PRAMEF22A3QJZ6 481 aa26.21■■□□□ 1.79
CCDC38-201ENST00000344280 SRGAP3O43295 1099 aa26.21■■□□□ 1.79
CCDC38-201ENST00000344280 IL25Q9H293 177 aa26.21■■□□□ 1.79
CCDC38-201ENST00000344280 PALD1Q9ULE6 856 aa26.21■■□□□ 1.79
CCDC38-201ENST00000344280 BAG4O95429 457 aaKnown RBP26.21■■□□□ 1.79
CCDC38-201ENST00000344280 CLEC17AQ6ZS10 378 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms