RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TSC1Q92574 1164 aa12.91□□□□□ -0.34
RPL28-201ENST00000344063 APPP05067 770 aa12.91□□□□□ -0.34
RPL28-201ENST00000344063 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 KDM4AO75164 1064 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 VAMP4O75379 141 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 LRSAM1Q6UWE0 723 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 NUTM1Q86Y26 1132 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 PDILTQ8N807 584 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 RASSF8Q8NHQ8 419 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 NOC3LQ8WTT2 800 aaKnown RBP12.9□□□□□ -0.34
RPL28-201ENST00000344063 POLKQ9UBT6 870 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 AACSQ86V21 672 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 RBSNQ9H1K0 784 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 A0A1W2PP64 1363 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 FLIIQ13045 1269 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 ESCO1Q5FWF5 840 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 TPM1P09493 284 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 NOLC1Q14978 699 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPL28-201ENST00000344063 GAS2L3Q86XJ1 694 aa12.9□□□□□ -0.34
RPL28-201ENST00000344063 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.34
RPL28-201ENST00000344063 ZNF396Q96N95 335 aaPredicted RBP12.9□□□□□ -0.34
RPL28-201ENST00000344063 CKAP2LQ8IYA6 745 aa12.89□□□□□ -0.35
RPL28-201ENST00000344063 DNAJC2Q99543 621 aaKnown RBP12.89□□□□□ -0.35
RPL28-201ENST00000344063 PTPRTO14522 1441 aa12.89□□□□□ -0.35
RPL28-201ENST00000344063 WASHC4Q2M389 1173 aa12.89□□□□□ -0.35
RPL28-201ENST00000344063 NUP62CLQ9H1M0 184 aa12.89□□□□□ -0.35
RPL28-201ENST00000344063 SDSP20132 328 aa12.89□□□□□ -0.35
RPL28-201ENST00000344063 KRT32Q14532 448 aa12.89□□□□□ -0.35
RPL28-201ENST00000344063 MAGI2Q86UL8 1455 aa12.89□□□□□ -0.35
RPL28-201ENST00000344063 SBNO2Q9Y2G9 1366 aa12.89□□□□□ -0.35
RPL28-201ENST00000344063 MCM5P33992 734 aa12.89□□□□□ -0.35
RPL28-201ENST00000344063 TRMT1Q9NXH9 659 aaKnown RBP12.89□□□□□ -0.35
RPL28-201ENST00000344063 LRRFIP2Q9Y608 721 aaKnown RBP12.89□□□□□ -0.35
RPL28-201ENST00000344063 ZMYM3Q14202 1370 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 TNNT1P13805 278 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 CCDC183Q5T5S1 534 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 TRMT2AQ8IZ69 625 aaKnown RBP12.88□□□□□ -0.35
RPL28-201ENST00000344063 CASTP20810 708 aaKnown RBP12.88□□□□□ -0.35
RPL28-201ENST00000344063 C17orf53Q8N3J3 647 aaPredicted RBP12.88□□□□□ -0.35
RPL28-201ENST00000344063 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 ABCA8O94911 1581 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 CCDC83Q8IWF9 413 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 DCTPP1Q9H773 170 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
RPL28-201ENST00000344063 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 DHX16O60231 1041 aaKnown RBP12.88□□□□□ -0.35
RPL28-201ENST00000344063 FBLN1P23142 703 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 RBM25P49756 843 aaKnown RBP12.88□□□□□ -0.35
RPL28-201ENST00000344063 SAFBQ15424 915 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPL28-201ENST00000344063 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
RPL28-201ENST00000344063 NFXL1Q6ZNB6 911 aa12.87□□□□□ -0.35
RPL28-201ENST00000344063 ATP7AQ04656 1500 aa12.87□□□□□ -0.35
RPL28-201ENST00000344063 MEIS3Q99687 375 aa12.87□□□□□ -0.35
RPL28-201ENST00000344063 KDM5DQ9BY66 1539 aa12.87□□□□□ -0.35
RPL28-201ENST00000344063 SIL1Q9H173 461 aa12.87□□□□□ -0.35
RPL28-201ENST00000344063 LIMCH1Q9UPQ0 1083 aa12.87□□□□□ -0.35
RPL28-201ENST00000344063 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
RPL28-201ENST00000344063 EVA1CP58658 441 aa12.86□□□□□ -0.35
RPL28-201ENST00000344063 SPATA32Q96LK8 384 aa12.86□□□□□ -0.35
RPL28-201ENST00000344063 MAP3K11Q16584 847 aa12.86□□□□□ -0.35
RPL28-201ENST00000344063 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
RPL28-201ENST00000344063 CCDC94Q9BW85 323 aaPredicted RBP12.86□□□□□ -0.35
RPL28-201ENST00000344063 TMX4Q9H1E5 349 aaPredicted RBP12.86□□□□□ -0.35
RPL28-201ENST00000344063 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.86□□□□□ -0.352e-6■■■□□ 18.1
RPL28-201ENST00000344063 POLR3GO15318 223 aaPredicted RBP12.86□□□□□ -0.35
RPL28-201ENST00000344063 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
RPL28-201ENST00000344063 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPL28-201ENST00000344063 CFAP45Q9UL16 551 aa12.86□□□□□ -0.35
RPL28-201ENST00000344063 V9GYY5 206 aaPredicted RBP12.86□□□□□ -0.35
RPL28-201ENST00000344063 HSP90B2PQ58FF3 399 aa12.85□□□□□ -0.35
RPL28-201ENST00000344063 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
RPL28-201ENST00000344063 KDM5AP29375 1690 aaKnown RBP12.85□□□□□ -0.35
RPL28-201ENST00000344063 PDE1AP54750 535 aa12.85□□□□□ -0.35
RPL28-201ENST00000344063 ANAPC15P60006 121 aa12.85□□□□□ -0.35
RPL28-201ENST00000344063 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
RPL28-201ENST00000344063 DNAAF4Q8WXU2 420 aa12.85□□□□□ -0.35
RPL28-201ENST00000344063 PRIMPOLQ96LW4 560 aa12.85□□□□□ -0.35
RPL28-201ENST00000344063 ZBTB7BO15156 539 aaPredicted RBP12.85□□□□□ -0.35
RPL28-201ENST00000344063 ATF3P18847 181 aa12.85□□□□□ -0.35
RPL28-201ENST00000344063 DHX8Q14562 1220 aaKnown RBP12.85□□□□□ -0.35
RPL28-201ENST00000344063 TMX3Q96JJ7 454 aa12.85□□□□□ -0.35
RPL28-201ENST00000344063 CALRP27797 417 aaKnown RBP12.84□□□□□ -0.35
RPL28-201ENST00000344063 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
RPL28-201ENST00000344063 STK38Q15208 465 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 ACEP12821 1306 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 ERICH2A1L162 156 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 PTPN14Q15678 1187 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 ANKRD20A12PQ8NF67 263 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 TRIM35Q9UPQ4 493 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 SYNMO15061 1565 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 PRPF40BQ6NWY9 871 aaKnown RBP12.84□□□□□ -0.35
RPL28-201ENST00000344063 OLFM4Q6UX06 510 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 PIK3R4Q99570 1358 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 GTF2F1P35269 517 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPL28-201ENST00000344063 PHACTR3Q96KR7 559 aa12.84□□□□□ -0.35
RPL28-201ENST00000344063 SCAND2PQ9GZW5 306 aaPredicted RBP12.84□□□□□ -0.35
RPL28-201ENST00000344063 NOL7Q9UMY1 257 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms