RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 IL17REQ8NFR9 667 aa12.52□□□□□ -0.41
CLDN18-202ENST00000343735 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
CLDN18-202ENST00000343735 USP21Q9UK80 565 aa12.52□□□□□ -0.41
CLDN18-202ENST00000343735 THUMPD2Q9BTF0 503 aaKnown RBP12.52□□□□□ -0.41
CLDN18-202ENST00000343735 EXOC5O00471 708 aa12.51□□□□□ -0.41
CLDN18-202ENST00000343735 SOS1Q07889 1333 aaPredicted RBP12.51□□□□□ -0.41
CLDN18-202ENST00000343735 BCAR3O75815 825 aa12.51□□□□□ -0.41
CLDN18-202ENST00000343735 KCNA4P22459 653 aa12.5□□□□□ -0.41
CLDN18-202ENST00000343735 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
CLDN18-202ENST00000343735 TSPYL4Q9UJ04 414 aa12.5□□□□□ -0.41
CLDN18-202ENST00000343735 LRP6O75581 1613 aa12.5□□□□□ -0.41
CLDN18-202ENST00000343735 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
CLDN18-202ENST00000343735 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
CLDN18-202ENST00000343735 MPRIPQ6WCQ1 1025 aa12.5□□□□□ -0.41
CLDN18-202ENST00000343735 TSR2Q969E8 191 aaKnown RBP12.5□□□□□ -0.41
CLDN18-202ENST00000343735 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
CLDN18-202ENST00000343735 EXOSC9Q06265 439 aaKnown RBP12.49□□□□□ -0.41
CLDN18-202ENST00000343735 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.49□□□□□ -0.41
CLDN18-202ENST00000343735 BCL9LQ86UU0 1499 aa12.49□□□□□ -0.41
CLDN18-202ENST00000343735 LRRC37A3O60309 1634 aa12.49□□□□□ -0.41
CLDN18-202ENST00000343735 NOP58Q9Y2X3 529 aaKnown RBP12.49□□□□□ -0.41
CLDN18-202ENST00000343735 ELL2O00472 640 aaPredicted RBP12.49□□□□□ -0.41
CLDN18-202ENST00000343735 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
CLDN18-202ENST00000343735 CYP27B1O15528 508 aa12.48□□□□□ -0.41
CLDN18-202ENST00000343735 LGR6Q9HBX8 967 aa12.48□□□□□ -0.41
CLDN18-202ENST00000343735 TRPC5Q9UL62 973 aaPredicted RBP12.48□□□□□ -0.41
CLDN18-202ENST00000343735 ALDH1L2Q3SY69 923 aa12.47□□□□□ -0.41
CLDN18-202ENST00000343735 TNNQ9UQP3 1299 aa12.47□□□□□ -0.41
CLDN18-202ENST00000343735 AFF2P51816 1311 aa12.47□□□□□ -0.41
CLDN18-202ENST00000343735 RNF123Q5XPI4 1314 aa12.47□□□□□ -0.41
CLDN18-202ENST00000343735 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
CLDN18-202ENST00000343735 DDB1Q16531 1140 aa12.47□□□□□ -0.41
CLDN18-202ENST00000343735 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
CLDN18-202ENST00000343735 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
CLDN18-202ENST00000343735 ADAMTS7Q9UKP4 1686 aa12.47□□□□□ -0.41
CLDN18-202ENST00000343735 CABP4P57796 275 aa12.46□□□□□ -0.41
CLDN18-202ENST00000343735 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.41
CLDN18-202ENST00000343735 ERICH6BQ5W0A0 696 aa12.46□□□□□ -0.41
CLDN18-202ENST00000343735 TNS2Q63HR2 1409 aa12.46□□□□□ -0.42
CLDN18-202ENST00000343735 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
CLDN18-202ENST00000343735 MS4A1P11836 297 aa12.45□□□□□ -0.42
CLDN18-202ENST00000343735 RARSP54136 660 aaKnown RBP12.45□□□□□ -0.42
CLDN18-202ENST00000343735 WNK3Q9BYP7 1800 aa12.45□□□□□ -0.42
CLDN18-202ENST00000343735 HOXB7P09629 217 aa12.44□□□□□ -0.42
CLDN18-202ENST00000343735 ZNF772Q68DY9 489 aaPredicted RBP12.44□□□□□ -0.42
CLDN18-202ENST00000343735 PANK1Q8TE04 598 aa12.44□□□□□ -0.42
CLDN18-202ENST00000343735 GJD4Q96KN9 370 aaPredicted RBP12.44□□□□□ -0.42
CLDN18-202ENST00000343735 KDM6AO15550 1401 aaPredicted RBP12.44□□□□□ -0.42
CLDN18-202ENST00000343735 VAMP4O75379 141 aa12.44□□□□□ -0.42
CLDN18-202ENST00000343735 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
CLDN18-202ENST00000343735 MRC1P22897 1456 aa12.44□□□□□ -0.42
CLDN18-202ENST00000343735 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
CLDN18-202ENST00000343735 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
CLDN18-202ENST00000343735 ATRNO75882 1429 aa12.43□□□□□ -0.42
CLDN18-202ENST00000343735 BRPF1P55201 1214 aaPredicted RBP12.43□□□□□ -0.42
CLDN18-202ENST00000343735 TTC5Q8N0Z6 440 aa12.43□□□□□ -0.42
CLDN18-202ENST00000343735 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
CLDN18-202ENST00000343735 MIS18AQ9NYP9 233 aa12.43□□□□□ -0.42
CLDN18-202ENST00000343735 KIF16BQ96L93 1317 aa12.42□□□□□ -0.42
CLDN18-202ENST00000343735 C8orf58Q8NAV2 365 aa12.42□□□□□ -0.42
CLDN18-202ENST00000343735 SMC4Q9NTJ3 1288 aa12.42□□□□□ -0.42
CLDN18-202ENST00000343735 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
CLDN18-202ENST00000343735 QTRT2Q9H974 415 aaKnown RBP12.42□□□□□ -0.42
CLDN18-202ENST00000343735 TMOD3Q9NYL9 352 aa12.42□□□□□ -0.42
CLDN18-202ENST00000343735 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
CLDN18-202ENST00000343735 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
CLDN18-202ENST00000343735 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
CLDN18-202ENST00000343735 ZNF790Q6PG37 636 aa12.41□□□□□ -0.42
CLDN18-202ENST00000343735 A0A0G2JS52 829 aa12.4□□□□□ -0.42
CLDN18-202ENST00000343735 ANP32AP39687 249 aaKnown RBP12.4□□□□□ -0.42
CLDN18-202ENST00000343735 RTL5Q5HYW3 569 aaPredicted RBP12.4□□□□□ -0.42
CLDN18-202ENST00000343735 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
CLDN18-202ENST00000343735 STK31Q9BXU1 1019 aa12.4□□□□□ -0.42
CLDN18-202ENST00000343735 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.42
CLDN18-202ENST00000343735 PDE3AQ14432 1141 aa12.4□□□□□ -0.42
CLDN18-202ENST00000343735 TSPYL6Q8N831 410 aa12.4□□□□□ -0.42
CLDN18-202ENST00000343735 SSH1Q8WYL5 1049 aa12.4□□□□□ -0.42
CLDN18-202ENST00000343735 VIRMAQ69YN4 1812 aaKnown RBP12.4□□□□□ -0.43
CLDN18-202ENST00000343735 SIPA1L3O60292 1781 aaPredicted RBP12.39□□□□□ -0.43
CLDN18-202ENST00000343735 KDM3BQ7LBC6 1761 aa12.39□□□□□ -0.43
CLDN18-202ENST00000343735 TULP1O00294 542 aaPredicted RBP12.39□□□□□ -0.43
CLDN18-202ENST00000343735 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
CLDN18-202ENST00000343735 FMNL2Q96PY5 1086 aa12.39□□□□□ -0.43
CLDN18-202ENST00000343735 ARHGAP45Q92619 1136 aa12.39□□□□□ -0.43
CLDN18-202ENST00000343735 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
CLDN18-202ENST00000343735 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
CLDN18-202ENST00000343735 HEG1Q9ULI3 1381 aa12.37□□□□□ -0.43
CLDN18-202ENST00000343735 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
CLDN18-202ENST00000343735 RBM6P78332 1123 aaKnown RBP12.37□□□□□ -0.43
CLDN18-202ENST00000343735 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
CLDN18-202ENST00000343735 THSD7AQ9UPZ6 1657 aa12.37□□□□□ -0.43
CLDN18-202ENST00000343735 GIGYF1O75420 1035 aaPredicted RBP12.36□□□□□ -0.43
CLDN18-202ENST00000343735 TEX13AQ9BXU3 409 aaPredicted RBP12.36□□□□□ -0.43
CLDN18-202ENST00000343735 API5Q9BZZ5 524 aaKnown RBP12.36□□□□□ -0.43
CLDN18-202ENST00000343735 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
CLDN18-202ENST00000343735 GLI3P10071 1580 aa12.36□□□□□ -0.43
CLDN18-202ENST00000343735 AAMPQ13685 434 aa12.36□□□□□ -0.43
CLDN18-202ENST00000343735 PTPRCP08575 1304 aa12.36□□□□□ -0.43
CLDN18-202ENST00000343735 CHMP4BQ9H444 224 aaKnown RBP12.36□□□□□ -0.43
CLDN18-202ENST00000343735 ATF7IPQ6VMQ6 1270 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms