RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CDK19Q9BWU1 502 aa17.87■□□□□ 0.45
CLCN1-201ENST00000343257 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.87■□□□□ 0.45
CLCN1-201ENST00000343257 V9GYY5 206 aaPredicted RBP17.87■□□□□ 0.45
CLCN1-201ENST00000343257 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
CLCN1-201ENST00000343257 IL1RAPL2Q9NP60 686 aa17.87■□□□□ 0.45
CLCN1-201ENST00000343257 CHMLP26374 656 aa17.87■□□□□ 0.45
CLCN1-201ENST00000343257 DNM1Q05193 864 aaKnown RBP17.87■□□□□ 0.45
CLCN1-201ENST00000343257 G2E3Q7L622 706 aa17.86■□□□□ 0.45
CLCN1-201ENST00000343257 NRBP1Q9UHY1 535 aa17.86■□□□□ 0.45
CLCN1-201ENST00000343257 ADGRB1O14514 1584 aa17.86■□□□□ 0.45
CLCN1-201ENST00000343257 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
CLCN1-201ENST00000343257 FAM135BQ49AJ0 1406 aa17.86■□□□□ 0.45
CLCN1-201ENST00000343257 NRXN1Q9ULB1 1477 aa17.86■□□□□ 0.45
CLCN1-201ENST00000343257 INTS4Q96HW7 963 aaKnown RBP17.85■□□□□ 0.45
CLCN1-201ENST00000343257 TCHHQ07283 1943 aa17.85■□□□□ 0.45
CLCN1-201ENST00000343257 HMMRO75330 724 aa17.85■□□□□ 0.45
CLCN1-201ENST00000343257 SYT1P21579 422 aa17.85■□□□□ 0.45
CLCN1-201ENST00000343257 NCBP1Q09161 790 aaKnown RBP17.85■□□□□ 0.45
CLCN1-201ENST00000343257 CCDC186Q7Z3E2 898 aa17.85■□□□□ 0.45
CLCN1-201ENST00000343257 VPS37CA5D8V6 355 aaPredicted RBP17.85■□□□□ 0.45
CLCN1-201ENST00000343257 ZSCAN22P10073 491 aaPredicted RBP17.85■□□□□ 0.45
CLCN1-201ENST00000343257 LUZP1Q86V48 1076 aa17.85■□□□□ 0.45
CLCN1-201ENST00000343257 AEBP1Q8IUX7 1158 aa17.85■□□□□ 0.45
CLCN1-201ENST00000343257 UBE2HP62256 183 aa17.84■□□□□ 0.45
CLCN1-201ENST00000343257 NME9Q86XW9 330 aa17.84■□□□□ 0.45
CLCN1-201ENST00000343257 CKAP2LQ8IYA6 745 aa17.84■□□□□ 0.45
CLCN1-201ENST00000343257 ANKRD7Q92527 254 aa17.84■□□□□ 0.45
CLCN1-201ENST00000343257 NPHP1O15259 732 aa17.84■□□□□ 0.45
CLCN1-201ENST00000343257 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
CLCN1-201ENST00000343257 SOX12O15370 315 aa17.83■□□□□ 0.45
CLCN1-201ENST00000343257 STX6O43752 255 aa17.83■□□□□ 0.45
CLCN1-201ENST00000343257 FAM173BQ6P4H8 233 aa17.83■□□□□ 0.45
CLCN1-201ENST00000343257 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
CLCN1-201ENST00000343257 RPAP1Q9BWH6 1393 aaPredicted RBP17.83■□□□□ 0.44
CLCN1-201ENST00000343257 ERICH4A6NGS2 130 aa17.83■□□□□ 0.44
CLCN1-201ENST00000343257 FERMT3Q86UX7 667 aa17.83■□□□□ 0.44
CLCN1-201ENST00000343257 IL13P35225 146 aa17.82■□□□□ 0.44
CLCN1-201ENST00000343257 CCDC83Q8IWF9 413 aa17.82■□□□□ 0.44
CLCN1-201ENST00000343257 ATP7AQ04656 1500 aa17.82■□□□□ 0.44
CLCN1-201ENST00000343257 PNPLA6Q8IY17 1366 aa17.82■□□□□ 0.44
CLCN1-201ENST00000343257 USP32Q8NFA0 1604 aa17.82■□□□□ 0.44
CLCN1-201ENST00000343257 PNMA6EA0A0J9YXQ4 647 aa17.81■□□□□ 0.44
CLCN1-201ENST00000343257 TNNT1P13805 278 aa17.81■□□□□ 0.44
CLCN1-201ENST00000343257 ARHGEF40Q8TER5 1519 aa17.81■□□□□ 0.44
CLCN1-201ENST00000343257 LARGE1O95461 756 aa17.81■□□□□ 0.44
CLCN1-201ENST00000343257 AK2P54819 239 aa17.81■□□□□ 0.44
CLCN1-201ENST00000343257 TRERF1Q96PN7 1200 aa17.81■□□□□ 0.44
CLCN1-201ENST00000343257 LRRCC1Q9C099 1032 aa17.81■□□□□ 0.44
CLCN1-201ENST00000343257 GOLGA6L6A8MZA4 724 aa17.81■□□□□ 0.44
CLCN1-201ENST00000343257 F13A1P00488 732 aa17.81■□□□□ 0.44
CLCN1-201ENST00000343257 OGFRQ9NZT2 677 aa17.8■□□□□ 0.44
CLCN1-201ENST00000343257 WAPLQ7Z5K2 1190 aa17.8■□□□□ 0.44
CLCN1-201ENST00000343257 TMEM51Q9NW97 253 aa17.8■□□□□ 0.44
CLCN1-201ENST00000343257 KCNJ4P48050 445 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 LMOD3Q0VAK6 560 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 PUS7Q96PZ0 661 aaKnown RBP17.79■□□□□ 0.44
CLCN1-201ENST00000343257 RIMS2Q9UQ26 1411 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 SETBP1Q9Y6X0 1596 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 RASEFQ8IZ41 740 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 TRIM5Q9C035 493 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 ZC3H13Q5T200 1668 aaKnown RBP17.79■□□□□ 0.44
CLCN1-201ENST00000343257 TPD52L1Q16890 204 aaPredicted RBP17.79■□□□□ 0.44
CLCN1-201ENST00000343257 SULT6B1Q6IMI4 303 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 FUCA2Q9BTY2 467 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 NPATQ14207 1427 aa17.79■□□□□ 0.44
CLCN1-201ENST00000343257 GLI2P10070 1586 aa17.78■□□□□ 0.44
CLCN1-201ENST00000343257 INO80Q9ULG1 1556 aaPredicted RBP17.78■□□□□ 0.44
CLCN1-201ENST00000343257 CTNNA3Q9UI47 895 aa17.78■□□□□ 0.44
CLCN1-201ENST00000343257 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
CLCN1-201ENST00000343257 RGS12O14924 1447 aa17.78■□□□□ 0.44
CLCN1-201ENST00000343257 CTIFO43310 598 aaKnown RBP17.78■□□□□ 0.44
CLCN1-201ENST00000343257 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
CLCN1-201ENST00000343257 PDE4CQ08493 712 aa17.78■□□□□ 0.44
CLCN1-201ENST00000343257 GJB2P29033 226 aa17.77■□□□□ 0.44
CLCN1-201ENST00000343257 RUFY3Q7L099 469 aa17.77■□□□□ 0.44
CLCN1-201ENST00000343257 PLCD3Q8N3E9 789 aa17.77■□□□□ 0.44
CLCN1-201ENST00000343257 NECAB1Q8N987 351 aa17.77■□□□□ 0.44
CLCN1-201ENST00000343257 OSBPL3Q9H4L5 887 aa17.77■□□□□ 0.44
CLCN1-201ENST00000343257 FANCAO15360 1455 aa17.77■□□□□ 0.43
CLCN1-201ENST00000343257 CDK11BP21127 795 aaKnown RBP17.77■□□□□ 0.43
CLCN1-201ENST00000343257 IDI1Q13907 227 aa17.77■□□□□ 0.43
CLCN1-201ENST00000343257 CCDC112Q8NEF3 446 aa17.77■□□□□ 0.43
CLCN1-201ENST00000343257 ST7Q9NRC1 585 aa17.77■□□□□ 0.43
CLCN1-201ENST00000343257 DEPDC5O75140 1603 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 ADGRB3O60242 1522 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 EFCAB6Q5THR3 1501 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 GNAI2P04899 355 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 LIG1P18858 919 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 ANAPC15P60006 121 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 REREQ9P2R6 1566 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 IFT172Q9UG01 1749 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 CASTP20810 708 aaKnown RBP17.76■□□□□ 0.43
CLCN1-201ENST00000343257 CWC27Q6UX04 472 aaKnown RBP17.76■□□□□ 0.43
CLCN1-201ENST00000343257 RTF1Q92541 710 aaKnown RBP17.76■□□□□ 0.43
CLCN1-201ENST00000343257 SNX14Q9Y5W7 946 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 VWDEQ8N2E2 1590 aa17.76■□□□□ 0.43
CLCN1-201ENST00000343257 CAMSAP1Q5T5Y3 1602 aa17.75■□□□□ 0.43
CLCN1-201ENST00000343257 FEZ1Q99689 392 aa17.75■□□□□ 0.43
CLCN1-201ENST00000343257 TFIP11Q9UBB9 837 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms