RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 LOC102724428A0A0B4J2F2 783 aa17.35■□□□□ 0.37
HLA-DQA1-201ENST00000343139 SIK1P57059 783 aa17.35■□□□□ 0.37
HLA-DQA1-201ENST00000343139 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
HLA-DQA1-201ENST00000343139 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
HLA-DQA1-201ENST00000343139 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
HLA-DQA1-201ENST00000343139 SCN11AQ9UI33 1791 aa17.33■□□□□ 0.37
HLA-DQA1-201ENST00000343139 MAPK8IP3Q9UPT6 1336 aa17.33■□□□□ 0.37
HLA-DQA1-201ENST00000343139 PSDA5PKW4 1024 aaPredicted RBP17.33■□□□□ 0.37
HLA-DQA1-201ENST00000343139 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
HLA-DQA1-201ENST00000343139 TEFQ10587 303 aa17.32■□□□□ 0.36
HLA-DQA1-201ENST00000343139 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
HLA-DQA1-201ENST00000343139 ZNF831Q5JPB2 1677 aa17.31■□□□□ 0.36
HLA-DQA1-201ENST00000343139 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
HLA-DQA1-201ENST00000343139 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
HLA-DQA1-201ENST00000343139 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
HLA-DQA1-201ENST00000343139 KCNQ4P56696 695 aa17.29■□□□□ 0.36
HLA-DQA1-201ENST00000343139 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
HLA-DQA1-201ENST00000343139 VSIG10Q8N0Z9 540 aa17.28■□□□□ 0.36
HLA-DQA1-201ENST00000343139 ITPK1Q13572 414 aa17.28■□□□□ 0.36
HLA-DQA1-201ENST00000343139 SLC4A9Q96Q91 983 aa17.28■□□□□ 0.36
HLA-DQA1-201ENST00000343139 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.35
HLA-DQA1-201ENST00000343139 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.35
HLA-DQA1-201ENST00000343139 TFCP2L1Q9NZI6 479 aa17.27■□□□□ 0.35
HLA-DQA1-201ENST00000343139 TMPOP42166 694 aaKnown RBP17.26■□□□□ 0.35
HLA-DQA1-201ENST00000343139 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
HLA-DQA1-201ENST00000343139 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
HLA-DQA1-201ENST00000343139 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
HLA-DQA1-201ENST00000343139 MCM10Q7L590 875 aa17.26■□□□□ 0.35
HLA-DQA1-201ENST00000343139 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
HLA-DQA1-201ENST00000343139 CICQ96RK0 1608 aaPredicted RBP17.26■□□□□ 0.35
HLA-DQA1-201ENST00000343139 PNPLA7Q6ZV29 1317 aa17.25■□□□□ 0.35
HLA-DQA1-201ENST00000343139 C5P01031 1676 aa17.25■□□□□ 0.35
HLA-DQA1-201ENST00000343139 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
HLA-DQA1-201ENST00000343139 TTC5Q8N0Z6 440 aa17.25■□□□□ 0.35
HLA-DQA1-201ENST00000343139 LINC00116Q8NCU8 138 aa17.25■□□□□ 0.35
HLA-DQA1-201ENST00000343139 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
HLA-DQA1-201ENST00000343139 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
HLA-DQA1-201ENST00000343139 CNTNAP4Q9C0A0 1308 aa17.25■□□□□ 0.35
HLA-DQA1-201ENST00000343139 KCPQ6ZWJ8 1503 aa17.24■□□□□ 0.35
HLA-DQA1-201ENST00000343139 CASZ1Q86V15 1759 aa17.24■□□□□ 0.35
HLA-DQA1-201ENST00000343139 BTBD11A6QL63 1104 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 SSFA2P28290 1259 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 RIPK4P57078 832 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 AK7Q96M32 723 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 C4BP0C0L5 1744 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 LRP5O75197 1615 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 DCTN1Q14203 1278 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 MTFR1LQ9H019 292 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 SPON1Q9HCB6 807 aa17.23■□□□□ 0.35
HLA-DQA1-201ENST00000343139 TEX13AQ9BXU3 409 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQA1-201ENST00000343139 BABAM1Q9NWV8 329 aa17.22■□□□□ 0.35
HLA-DQA1-201ENST00000343139 SIPA1L3O60292 1781 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQA1-201ENST00000343139 TAF1LQ8IZX4 1826 aa17.22■□□□□ 0.35
HLA-DQA1-201ENST00000343139 CCDC146Q8IYE0 955 aa17.21■□□□□ 0.35
HLA-DQA1-201ENST00000343139 FMNL2Q96PY5 1086 aa17.21■□□□□ 0.35
HLA-DQA1-201ENST00000343139 PDGFDQ9GZP0 370 aaPredicted RBP17.21■□□□□ 0.35
HLA-DQA1-201ENST00000343139 ADRA2BP18089 450 aa17.2■□□□□ 0.34
HLA-DQA1-201ENST00000343139 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
HLA-DQA1-201ENST00000343139 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQA1-201ENST00000343139 HEG1Q9ULI3 1381 aa17.2■□□□□ 0.34
HLA-DQA1-201ENST00000343139 UBR2Q8IWV8 1755 aa17.19■□□□□ 0.34
HLA-DQA1-201ENST00000343139 COL23A1Q86Y22 540 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQA1-201ENST00000343139 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
HLA-DQA1-201ENST00000343139 GNPATO15228 680 aa17.19■□□□□ 0.34
HLA-DQA1-201ENST00000343139 RPS6KA4O75676 772 aa17.19■□□□□ 0.34
HLA-DQA1-201ENST00000343139 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
HLA-DQA1-201ENST00000343139 COL5A3P25940 1745 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQA1-201ENST00000343139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.18■□□□□ 0.34
HLA-DQA1-201ENST00000343139 CYP19A1P11511 503 aaPredicted RBP17.18■□□□□ 0.34
HLA-DQA1-201ENST00000343139 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
HLA-DQA1-201ENST00000343139 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
HLA-DQA1-201ENST00000343139 TRIM35Q9UPQ4 493 aa17.18■□□□□ 0.34
HLA-DQA1-201ENST00000343139 ZBTB7AO95365 584 aa17.17■□□□□ 0.34
HLA-DQA1-201ENST00000343139 STARD3NLO95772 234 aa17.17■□□□□ 0.34
HLA-DQA1-201ENST00000343139 SGIP1Q9BQI5 828 aa17.17■□□□□ 0.34
HLA-DQA1-201ENST00000343139 APAF1O14727 1248 aa17.16■□□□□ 0.34
HLA-DQA1-201ENST00000343139 PTGER2P43116 358 aa17.16■□□□□ 0.34
HLA-DQA1-201ENST00000343139 INTS5Q6P9B9 1019 aaKnown RBP17.16■□□□□ 0.34
HLA-DQA1-201ENST00000343139 AMIGO3Q86WK7 504 aa17.16■□□□□ 0.34
HLA-DQA1-201ENST00000343139 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
HLA-DQA1-201ENST00000343139 TJP1Q07157 1748 aa17.16■□□□□ 0.34
HLA-DQA1-201ENST00000343139 TRAPPC3LQ5T215 181 aa17.15■□□□□ 0.34
HLA-DQA1-201ENST00000343139 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
HLA-DQA1-201ENST00000343139 RRP7AQ9Y3A4 280 aaKnown RBP17.15■□□□□ 0.34
HLA-DQA1-201ENST00000343139 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
HLA-DQA1-201ENST00000343139 CCER2I3L3R5 266 aa17.15■□□□□ 0.34
HLA-DQA1-201ENST00000343139 KCNQ3O43525 872 aa17.15■□□□□ 0.34
HLA-DQA1-201ENST00000343139 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
HLA-DQA1-201ENST00000343139 NEUROD2Q15784 382 aa17.15■□□□□ 0.34
HLA-DQA1-201ENST00000343139 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
HLA-DQA1-201ENST00000343139 CALD1Q05682 793 aaKnown RBP17.14■□□□□ 0.33
HLA-DQA1-201ENST00000343139 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
HLA-DQA1-201ENST00000343139 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.33
HLA-DQA1-201ENST00000343139 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQA1-201ENST00000343139 CHL1O00533 1208 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms