RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 CCDC112Q8NEF3 446 aa16.44■□□□□ 0.22
SYDE1-201ENST00000342784 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
SYDE1-201ENST00000342784 ANKRD36BQ8N2N9 1353 aa16.44■□□□□ 0.22
SYDE1-201ENST00000342784 IL16Q14005 1332 aa16.43■□□□□ 0.22
SYDE1-201ENST00000342784 DEPDC5O75140 1603 aa16.43■□□□□ 0.22
SYDE1-201ENST00000342784 SDSP20132 328 aa16.43■□□□□ 0.22
SYDE1-201ENST00000342784 KRT222Q8N1A0 295 aa16.43■□□□□ 0.22
SYDE1-201ENST00000342784 LOC102724159A0A0B4J2E5 919 aa16.43■□□□□ 0.22
SYDE1-201ENST00000342784 PWP2Q15269 919 aaKnown RBP16.43■□□□□ 0.22
SYDE1-201ENST00000342784 SIRT2Q8IXJ6 389 aa16.43■□□□□ 0.22
SYDE1-201ENST00000342784 SLFN14P0C7P3 912 aa16.43■□□□□ 0.22
SYDE1-201ENST00000342784 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
SYDE1-201ENST00000342784 MX1P20591 662 aa16.42■□□□□ 0.22
SYDE1-201ENST00000342784 ZNF592Q92610 1267 aa16.42■□□□□ 0.22
SYDE1-201ENST00000342784 DDX41Q9UJV9 622 aaKnown RBP16.42■□□□□ 0.22
SYDE1-201ENST00000342784 EFCAB6Q5THR3 1501 aa16.42■□□□□ 0.22
SYDE1-201ENST00000342784 MADDQ8WXG6 1647 aa16.42■□□□□ 0.22
SYDE1-201ENST00000342784 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
SYDE1-201ENST00000342784 CAPN2P17655 700 aa16.41■□□□□ 0.22
SYDE1-201ENST00000342784 CLTCL1P53675 1640 aa16.41■□□□□ 0.22
SYDE1-201ENST00000342784 SPHKAPQ2M3C7 1700 aa16.41■□□□□ 0.22
SYDE1-201ENST00000342784 TERF2Q15554 542 aa16.41■□□□□ 0.22
SYDE1-201ENST00000342784 SMTNL1A8MU46 457 aa16.41■□□□□ 0.22
SYDE1-201ENST00000342784 TNNT1P13805 278 aa16.41■□□□□ 0.22
SYDE1-201ENST00000342784 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
SYDE1-201ENST00000342784 GEMIN8Q9NWZ8 242 aaKnown RBP16.4■□□□□ 0.22
SYDE1-201ENST00000342784 GRIPAP1Q4V328 841 aa16.4■□□□□ 0.22
SYDE1-201ENST00000342784 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
SYDE1-201ENST00000342784 KCNF1Q9H3M0 494 aa16.4■□□□□ 0.22
SYDE1-201ENST00000342784 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
SYDE1-201ENST00000342784 CABP2Q9NPB3 220 aa16.39■□□□□ 0.21
SYDE1-201ENST00000342784 ZNF428Q96B54 188 aa16.39■□□□□ 0.21
SYDE1-201ENST00000342784 PTGS1P23219 599 aa16.39■□□□□ 0.21
SYDE1-201ENST00000342784 SHPRHQ149N8 1683 aa16.38■□□□□ 0.21
SYDE1-201ENST00000342784 FIBPO43427 364 aa16.38■□□□□ 0.21
SYDE1-201ENST00000342784 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
SYDE1-201ENST00000342784 PTPRTO14522 1441 aa16.38■□□□□ 0.21
SYDE1-201ENST00000342784 TRPM2O94759 1503 aa16.38■□□□□ 0.21
SYDE1-201ENST00000342784 SYCP1Q15431 976 aa16.38■□□□□ 0.21
SYDE1-201ENST00000342784 VWDEQ8N2E2 1590 aa16.38■□□□□ 0.21
SYDE1-201ENST00000342784 NAA30Q147X3 362 aaPredicted RBP16.37■□□□□ 0.21
SYDE1-201ENST00000342784 TPD52L1Q16890 204 aaPredicted RBP16.37■□□□□ 0.21
SYDE1-201ENST00000342784 TNNT3P45378 269 aaPredicted RBP16.37■□□□□ 0.21
SYDE1-201ENST00000342784 KIF18AQ8NI77 898 aa16.37■□□□□ 0.21
SYDE1-201ENST00000342784 DCTPP1Q9H773 170 aa16.37■□□□□ 0.21
SYDE1-201ENST00000342784 CNPY2Q9Y2B0 182 aa16.37■□□□□ 0.21
SYDE1-201ENST00000342784 MORC2Q9Y6X9 1032 aaPredicted RBP16.37■□□□□ 0.21
SYDE1-201ENST00000342784 SIGLEC1Q9BZZ2 1709 aa16.37■□□□□ 0.21
SYDE1-201ENST00000342784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.37■□□□□ 0.21
SYDE1-201ENST00000342784 INTS4Q96HW7 963 aaKnown RBP16.37■□□□□ 0.21
SYDE1-201ENST00000342784 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
SYDE1-201ENST00000342784 ARHGAP45Q92619 1136 aa16.36■□□□□ 0.21
SYDE1-201ENST00000342784 UBE2HP62256 183 aa16.36■□□□□ 0.21
SYDE1-201ENST00000342784 MRPL50Q8N5N7 158 aaKnown RBP16.36■□□□□ 0.21
SYDE1-201ENST00000342784 PAXBP1Q9Y5B6 917 aa16.36■□□□□ 0.21
SYDE1-201ENST00000342784 ARHGEF40Q8TER5 1519 aa16.36■□□□□ 0.21
SYDE1-201ENST00000342784 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
SYDE1-201ENST00000342784 YY1AP1Q9H869 796 aa16.36■□□□□ 0.21
SYDE1-201ENST00000342784 ANO2Q9NQ90 1003 aa16.36■□□□□ 0.21
SYDE1-201ENST00000342784 CAMSAP1Q5T5Y3 1602 aa16.35■□□□□ 0.21
SYDE1-201ENST00000342784 UPF3BQ9BZI7 483 aaKnown RBP16.35■□□□□ 0.21
SYDE1-201ENST00000342784 CLTCQ00610 1675 aaKnown RBP16.35■□□□□ 0.21
SYDE1-201ENST00000342784 CCDC192P0DO97 292 aa16.35■□□□□ 0.21
SYDE1-201ENST00000342784 CUL4AQ13619 759 aa16.35■□□□□ 0.21
SYDE1-201ENST00000342784 CCDC186Q7Z3E2 898 aa16.35■□□□□ 0.21
SYDE1-201ENST00000342784 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
SYDE1-201ENST00000342784 PLEKHF1Q96S99 279 aa16.35■□□□□ 0.21
SYDE1-201ENST00000342784 TSPYL1Q9H0U9 437 aa16.34■□□□□ 0.21
SYDE1-201ENST00000342784 SRPK2P78362 688 aaKnown RBP16.34■□□□□ 0.21
SYDE1-201ENST00000342784 CARD10Q9BWT7 1032 aa16.34■□□□□ 0.21
SYDE1-201ENST00000342784 SRCIN1Q9C0H9 1055 aa16.34■□□□□ 0.21
SYDE1-201ENST00000342784 ATP6V1DQ9Y5K8 247 aa16.33■□□□□ 0.2
SYDE1-201ENST00000342784 REREQ9P2R6 1566 aa16.33■□□□□ 0.2
SYDE1-201ENST00000342784 ATAD2Q6PL18 1390 aa16.33■□□□□ 0.2
SYDE1-201ENST00000342784 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.33■□□□□ 0.2
SYDE1-201ENST00000342784 V9GYY5 206 aaPredicted RBP16.33■□□□□ 0.2
SYDE1-201ENST00000342784 MED14O60244 1454 aa16.32■□□□□ 0.2
SYDE1-201ENST00000342784 RTF1Q92541 710 aaKnown RBP16.32■□□□□ 0.2
SYDE1-201ENST00000342784 MINK1Q8N4C8 1332 aaPredicted RBP16.32■□□□□ 0.2
SYDE1-201ENST00000342784 VAMP4O75379 141 aa16.32■□□□□ 0.2
SYDE1-201ENST00000342784 TRIM5Q9C035 493 aa16.32■□□□□ 0.2
SYDE1-201ENST00000342784 LRMPQ12912 555 aa16.32■□□□□ 0.2
SYDE1-201ENST00000342784 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
SYDE1-201ENST00000342784 DIAPH1O60610 1272 aaKnown RBP16.31■□□□□ 0.2
SYDE1-201ENST00000342784 BANK1Q8NDB2 785 aa16.31■□□□□ 0.2
SYDE1-201ENST00000342784 KIF1BO60333 1816 aa16.31■□□□□ 0.2
SYDE1-201ENST00000342784 AP5Z1O43299 807 aa16.31■□□□□ 0.2
SYDE1-201ENST00000342784 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
SYDE1-201ENST00000342784 CHMP3Q9Y3E7 222 aa16.31■□□□□ 0.2
SYDE1-201ENST00000342784 LMTK2Q8IWU2 1503 aa16.3■□□□□ 0.2
SYDE1-201ENST00000342784 TULP2O00295 520 aa16.3■□□□□ 0.2
SYDE1-201ENST00000342784 NPHP1O15259 732 aa16.3■□□□□ 0.2
SYDE1-201ENST00000342784 BRPF1P55201 1214 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-201ENST00000342784 CEP135Q66GS9 1140 aa16.3■□□□□ 0.2
SYDE1-201ENST00000342784 NOL10Q9BSC4 688 aaKnown RBP16.3■□□□□ 0.2
SYDE1-201ENST00000342784 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.3■□□□□ 0.2
SYDE1-201ENST00000342784 CCDC9Q9Y3X0 531 aaKnown RBP16.3■□□□□ 0.2
SYDE1-201ENST00000342784 ABCC4O15439 1325 aa16.3■□□□□ 0.2
SYDE1-201ENST00000342784 HMOX1P09601 288 aa16.29■□□□□ 0.2
SYDE1-201ENST00000342784 TWISTNBQ3B726 338 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms