RNA–Protein interactions for RNA: ENST00000342756.9

SRP72-201, Transcript of signal recognition particle 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP72, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP72-201ENST00000342756 NECAB1Q8N987 351 aa13.17□□□□□ -0.3
SRP72-201ENST00000342756 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
SRP72-201ENST00000342756 NUP62CLQ9H1M0 184 aa13.17□□□□□ -0.3
SRP72-201ENST00000342756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.17□□□□□ -0.33e-7■□□□□ 11.3
SRP72-201ENST00000342756 ATP10AO60312 1499 aa13.17□□□□□ -0.3
SRP72-201ENST00000342756 STX6O43752 255 aa13.17□□□□□ -0.3
SRP72-201ENST00000342756 AACSQ86V21 672 aa13.17□□□□□ -0.3
SRP72-201ENST00000342756 C16orf45Q96MC5 204 aaPredicted RBP13.17□□□□□ -0.3
SRP72-201ENST00000342756 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
SRP72-201ENST00000342756 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
SRP72-201ENST00000342756 SIRT2Q8IXJ6 389 aa13.17□□□□□ -0.3
SRP72-201ENST00000342756 DNAJC2Q99543 621 aaKnown RBP13.17□□□□□ -0.3
SRP72-201ENST00000342756 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 CREBRFQ8IUR6 639 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
SRP72-201ENST00000342756 NOLC1Q14978 699 aaKnown RBP eCLIP13.16□□□□□ -0.35e-6■□□□□ 9.2
SRP72-201ENST00000342756 TAF7Q15545 349 aaPredicted RBP13.16□□□□□ -0.3
SRP72-201ENST00000342756 NEUROD6Q96NK8 337 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 TRPM1Q7Z4N2 1603 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 ZNF445P59923 1031 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 PPP4R3BQ5MIZ7 849 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 SPATA32Q96LK8 384 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 PPIP5K1Q6PFW1 1433 aa13.16□□□□□ -0.3
SRP72-201ENST00000342756 DYNC1I1O14576 645 aa13.15□□□□□ -0.3
SRP72-201ENST00000342756 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
SRP72-201ENST00000342756 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
SRP72-201ENST00000342756 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
SRP72-201ENST00000342756 GPT2Q8TD30 523 aa13.15□□□□□ -0.3
SRP72-201ENST00000342756 PTPRCP08575 1304 aa13.15□□□□□ -0.3
SRP72-201ENST00000342756 GJB2P29033 226 aa13.15□□□□□ -0.3
SRP72-201ENST00000342756 TPM4P67936 248 aa13.15□□□□□ -0.3
SRP72-201ENST00000342756 BLOC1S2Q6QNY1 142 aa13.15□□□□□ -0.3
SRP72-201ENST00000342756 PDCP20941 246 aa13.14□□□□□ -0.31
SRP72-201ENST00000342756 PSMA5P28066 241 aa13.14□□□□□ -0.31
SRP72-201ENST00000342756 EIF4A2Q14240 407 aaKnown RBP13.14□□□□□ -0.31
SRP72-201ENST00000342756 MAP3K11Q16584 847 aa13.14□□□□□ -0.31
SRP72-201ENST00000342756 MSH6P52701 1360 aa13.14□□□□□ -0.31
SRP72-201ENST00000342756 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
SRP72-201ENST00000342756 DNM1Q05193 864 aaKnown RBP13.14□□□□□ -0.31
SRP72-201ENST00000342756 CCDC112Q8NEF3 446 aa13.14□□□□□ -0.31
SRP72-201ENST00000342756 CCDC8Q9H0W5 538 aaPredicted RBP13.14□□□□□ -0.31
SRP72-201ENST00000342756 BOLA2Q9H3K6 86 aa13.14□□□□□ -0.31
SRP72-201ENST00000342756 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
SRP72-201ENST00000342756 MCM5P33992 734 aa13.13□□□□□ -0.31
SRP72-201ENST00000342756 KIF1BPQ96EK5 621 aa13.13□□□□□ -0.31
SRP72-201ENST00000342756 PPP1R9BQ96SB3 815 aa13.13□□□□□ -0.31
SRP72-201ENST00000342756 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
SRP72-201ENST00000342756 ARHGEF5Q12774 1597 aa13.13□□□□□ -0.31
SRP72-201ENST00000342756 SYNMO15061 1565 aa13.13□□□□□ -0.31
SRP72-201ENST00000342756 TOMM22Q9NS69 142 aa13.13□□□□□ -0.31
SRP72-201ENST00000342756 NSFL1CQ9UNZ2 370 aaKnown RBP13.13□□□□□ -0.31
SRP72-201ENST00000342756 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
SRP72-201ENST00000342756 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
SRP72-201ENST00000342756 CHMLP26374 656 aa13.12□□□□□ -0.31
SRP72-201ENST00000342756 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
SRP72-201ENST00000342756 ZSCAN22P10073 491 aaPredicted RBP13.12□□□□□ -0.31
SRP72-201ENST00000342756 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
SRP72-201ENST00000342756 SMC2O95347 1197 aa13.12□□□□□ -0.31
SRP72-201ENST00000342756 TPM3P06753 285 aa13.12□□□□□ -0.31
SRP72-201ENST00000342756 UBE2HP62256 183 aa13.12□□□□□ -0.31
SRP72-201ENST00000342756 FAM173BQ6P4H8 233 aa13.12□□□□□ -0.31
SRP72-201ENST00000342756 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
SRP72-201ENST00000342756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.31
SRP72-201ENST00000342756 IL13P35225 146 aa13.11□□□□□ -0.31
SRP72-201ENST00000342756 CPLX1O14810 134 aa13.11□□□□□ -0.31
SRP72-201ENST00000342756 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
SRP72-201ENST00000342756 MYL6BP14649 208 aa13.11□□□□□ -0.31
SRP72-201ENST00000342756 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
SRP72-201ENST00000342756 PNMA6EA0A0J9YXQ4 647 aa13.11□□□□□ -0.31
SRP72-201ENST00000342756 ME1P48163 572 aa13.11□□□□□ -0.31
SRP72-201ENST00000342756 AK2P54819 239 aa13.11□□□□□ -0.31
SRP72-201ENST00000342756 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
SRP72-201ENST00000342756 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
SRP72-201ENST00000342756 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
SRP72-201ENST00000342756 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
SRP72-201ENST00000342756 PI4KAP2A4QPH2 592 aa13.1□□□□□ -0.31
SRP72-201ENST00000342756 GLRX3O76003 335 aaKnown RBP13.1□□□□□ -0.31
SRP72-201ENST00000342756 PSME1Q06323 249 aa13.1□□□□□ -0.31
SRP72-201ENST00000342756 STK11IPQ8N1F8 1099 aa13.1□□□□□ -0.31
SRP72-201ENST00000342756 PI4KAP1Q8N8J0 262 aa13.1□□□□□ -0.31
SRP72-201ENST00000342756 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
SRP72-201ENST00000342756 CDC42BPAQ5VT25 1732 aa13.1□□□□□ -0.31
SRP72-201ENST00000342756 GUCY1B3Q02153 619 aa13.1□□□□□ -0.31
SRP72-201ENST00000342756 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
SRP72-201ENST00000342756 SYT1P21579 422 aa13.09□□□□□ -0.31
SRP72-201ENST00000342756 ZNF530Q6P9A1 599 aaPredicted RBP13.09□□□□□ -0.31
SRP72-201ENST00000342756 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
SRP72-201ENST00000342756 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
SRP72-201ENST00000342756 KIF2CQ99661 725 aa13.09□□□□□ -0.31
SRP72-201ENST00000342756 ABCA8O94911 1581 aa13.09□□□□□ -0.31
SRP72-201ENST00000342756 ABCC4O15439 1325 aa13.09□□□□□ -0.31
SRP72-201ENST00000342756 TNNT1P13805 278 aa13.09□□□□□ -0.31
SRP72-201ENST00000342756 ZMYM3Q14202 1370 aa13.09□□□□□ -0.31
SRP72-201ENST00000342756 CCDC186Q7Z3E2 898 aa13.09□□□□□ -0.31
SRP72-201ENST00000342756 ACEP12821 1306 aa13.08□□□□□ -0.31
SRP72-201ENST00000342756 TNNT3P45378 269 aaPredicted RBP13.08□□□□□ -0.31
SRP72-201ENST00000342756 ZSCAN31Q96LW9 406 aaPredicted RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms