RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 CABP4P57796 275 aa21.2■□□□□ 0.98
SNED1-202ENST00000342631 MARCH10Q8NA82 808 aaPredicted RBP21.2■□□□□ 0.98
SNED1-202ENST00000342631 TSPYL4Q9UJ04 414 aa21.2■□□□□ 0.98
SNED1-202ENST00000342631 TSR2Q969E8 191 aaKnown RBP21.19■□□□□ 0.98
SNED1-202ENST00000342631 RXRBP28702 533 aa21.19■□□□□ 0.98
SNED1-202ENST00000342631 RGS17Q9UGC6 210 aaPredicted RBP21.19■□□□□ 0.98
SNED1-202ENST00000342631 BTBD11A6QL63 1104 aa21.18■□□□□ 0.98
SNED1-202ENST00000342631 KDM3BQ7LBC6 1761 aa21.18■□□□□ 0.98
SNED1-202ENST00000342631 BCL9O00512 1426 aa21.18■□□□□ 0.98
SNED1-202ENST00000342631 TOGARAM1Q9Y4F4 1720 aa21.18■□□□□ 0.98
SNED1-202ENST00000342631 NFATC2IPQ8NCF5 419 aa21.17■□□□□ 0.98
SNED1-202ENST00000342631 ZNF428Q96B54 188 aa21.15■□□□□ 0.98
SNED1-202ENST00000342631 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
SNED1-202ENST00000342631 SOS1Q07889 1333 aaPredicted RBP21.15■□□□□ 0.98
SNED1-202ENST00000342631 ITGB4P16144 1822 aa21.15■□□□□ 0.98
SNED1-202ENST00000342631 EXOSC9Q06265 439 aaKnown RBP21.14■□□□□ 0.98
SNED1-202ENST00000342631 MIS18AQ9NYP9 233 aa21.14■□□□□ 0.98
SNED1-202ENST00000342631 DOT1LQ8TEK3 1739 aa21.14■□□□□ 0.97
SNED1-202ENST00000342631 ZNF790Q6PG37 636 aa21.12■□□□□ 0.97
SNED1-202ENST00000342631 POTEAQ6S8J7 498 aa21.12■□□□□ 0.97
SNED1-202ENST00000342631 BRWD3Q6RI45 1802 aa21.11■□□□□ 0.97
SNED1-202ENST00000342631 KRT27Q7Z3Y8 459 aa21.11■□□□□ 0.97
SNED1-202ENST00000342631 TTC5Q8N0Z6 440 aa21.11■□□□□ 0.97
SNED1-202ENST00000342631 CHMP4AQ9BY43 222 aa21.11■□□□□ 0.97
SNED1-202ENST00000342631 PAPPAQ13219 1627 aa21.1■□□□□ 0.97
SNED1-202ENST00000342631 EIF4A1P60842 406 aaKnown RBP21.1■□□□□ 0.97
SNED1-202ENST00000342631 RCAN3Q9UKA8 241 aa21.1■□□□□ 0.97
SNED1-202ENST00000342631 KAT6BQ8WYB5 2073 aa21.1■□□□□ 0.97
SNED1-202ENST00000342631 HOXB7P09629 217 aa21.1■□□□□ 0.97
SNED1-202ENST00000342631 PRIM1P49642 420 aaKnown RBP21.1■□□□□ 0.97
SNED1-202ENST00000342631 TWISTNBQ3B726 338 aaPredicted RBP21.09■□□□□ 0.97
SNED1-202ENST00000342631 PIGBQ92521 554 aa21.09■□□□□ 0.97
SNED1-202ENST00000342631 HEG1Q9ULI3 1381 aa21.08■□□□□ 0.97
SNED1-202ENST00000342631 C8orf58Q8NAV2 365 aa21.08■□□□□ 0.97
SNED1-202ENST00000342631 FAM196AQ6ZSG2 479 aa21.08■□□□□ 0.96
SNED1-202ENST00000342631 UBR2Q8IWV8 1755 aa21.07■□□□□ 0.96
SNED1-202ENST00000342631 VAMP4O75379 141 aa21.07■□□□□ 0.96
SNED1-202ENST00000342631 SYTL4Q96C24 671 aaPredicted RBP21.07■□□□□ 0.96
SNED1-202ENST00000342631 RGS12O14924 1447 aa21.07■□□□□ 0.96
SNED1-202ENST00000342631 NHSQ6T4R5 1651 aa21.06■□□□□ 0.96
SNED1-202ENST00000342631 SLC39A6Q13433 755 aa21.06■□□□□ 0.96
SNED1-202ENST00000342631 FMNL2Q96PY5 1086 aa21.06■□□□□ 0.96
SNED1-202ENST00000342631 KCNQ3O43525 872 aa21.06■□□□□ 0.96
SNED1-202ENST00000342631 TSPYL6Q8N831 410 aa21.06■□□□□ 0.96
SNED1-202ENST00000342631 SBF2Q86WG5 1849 aa21.05■□□□□ 0.96
SNED1-202ENST00000342631 ALDH1L2Q3SY69 923 aa21.05■□□□□ 0.96
SNED1-202ENST00000342631 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
SNED1-202ENST00000342631 RARSP54136 660 aaKnown RBP21.04■□□□□ 0.96
SNED1-202ENST00000342631 GIGYF1O75420 1035 aaPredicted RBP21.03■□□□□ 0.96
SNED1-202ENST00000342631 SMARCC1Q92922 1105 aaPredicted RBP21.03■□□□□ 0.96
SNED1-202ENST00000342631 ZNF496Q96IT1 587 aaPredicted RBP21.03■□□□□ 0.96
SNED1-202ENST00000342631 ATG3Q9NT62 314 aa21.03■□□□□ 0.96
SNED1-202ENST00000342631 KCPQ6ZWJ8 1503 aa21.03■□□□□ 0.96
SNED1-202ENST00000342631 ELL2O00472 640 aaPredicted RBP21.02■□□□□ 0.96
SNED1-202ENST00000342631 KRT24Q2M2I5 525 aa21.02■□□□□ 0.96
SNED1-202ENST00000342631 SNRPA1P09661 255 aaKnown RBP21.02■□□□□ 0.95
SNED1-202ENST00000342631 VSIG10Q8N0Z9 540 aa21.02■□□□□ 0.95
SNED1-202ENST00000342631 ASAP1Q9ULH1 1129 aa21.02■□□□□ 0.95
SNED1-202ENST00000342631 BRPF1P55201 1214 aaPredicted RBP21.01■□□□□ 0.95
SNED1-202ENST00000342631 KCNQ2O43526 872 aa21■□□□□ 0.95
SNED1-202ENST00000342631 CACNA1FO60840 1977 aa21■□□□□ 0.95
SNED1-202ENST00000342631 FAM182BQ5T319 152 aa21■□□□□ 0.95
SNED1-202ENST00000342631 CCDC30Q5VVM6 783 aa21■□□□□ 0.95
SNED1-202ENST00000342631 BCL11BQ9C0K0 894 aaPredicted RBP21■□□□□ 0.95
SNED1-202ENST00000342631 RNF123Q5XPI4 1314 aa20.99■□□□□ 0.95
SNED1-202ENST00000342631 TEX13AQ9BXU3 409 aaPredicted RBP20.99■□□□□ 0.95
SNED1-202ENST00000342631 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.98■□□□□ 0.95
SNED1-202ENST00000342631 SSH1Q8WYL5 1049 aa20.98■□□□□ 0.95
SNED1-202ENST00000342631 BTAF1O14981 1849 aa20.98■□□□□ 0.95
SNED1-202ENST00000342631 HDGFL1Q5TGJ6 251 aa20.98■□□□□ 0.95
SNED1-202ENST00000342631 SMC4Q9NTJ3 1288 aa20.98■□□□□ 0.95
SNED1-202ENST00000342631 SUPT16HQ9Y5B9 1047 aaKnown RBP20.98■□□□□ 0.95
SNED1-202ENST00000342631 LAMB4A4D0S4 1761 aa20.97■□□□□ 0.95
SNED1-202ENST00000342631 ZNF831Q5JPB2 1677 aa20.97■□□□□ 0.95
SNED1-202ENST00000342631 PTCD1O75127 700 aaKnown RBP20.96■□□□□ 0.95
SNED1-202ENST00000342631 STK31Q9BXU1 1019 aa20.96■□□□□ 0.95
SNED1-202ENST00000342631 CICQ96RK0 1608 aaPredicted RBP20.96■□□□□ 0.95
SNED1-202ENST00000342631 C5P01031 1676 aa20.96■□□□□ 0.95
SNED1-202ENST00000342631 KIF16BQ96L93 1317 aa20.96■□□□□ 0.95
SNED1-202ENST00000342631 PALLDQ8WX93 1383 aa20.96■□□□□ 0.95
SNED1-202ENST00000342631 BCAR3O75815 825 aa20.95■□□□□ 0.94
SNED1-202ENST00000342631 RBM42Q9BTD8 480 aaKnown RBP20.94■□□□□ 0.94
SNED1-202ENST00000342631 ERBB4Q15303 1308 aa20.94■□□□□ 0.94
SNED1-202ENST00000342631 RRP1P56182 461 aaKnown RBP20.94■□□□□ 0.94
SNED1-202ENST00000342631 MRPL50Q8N5N7 158 aaKnown RBP20.94■□□□□ 0.94
SNED1-202ENST00000342631 EIF2S2P20042 333 aaKnown RBP20.93■□□□□ 0.94
SNED1-202ENST00000342631 DBF4Q9UBU7 674 aaPredicted RBP20.93■□□□□ 0.94
SNED1-202ENST00000342631 IPO8O15397 1037 aaKnown RBP20.92■□□□□ 0.94
SNED1-202ENST00000342631 LOC102724428A0A0B4J2F2 783 aa20.92■□□□□ 0.94
SNED1-202ENST00000342631 SIK1P57059 783 aa20.92■□□□□ 0.94
SNED1-202ENST00000342631 BCL2L13Q9BXK5 485 aa20.92■□□□□ 0.94
SNED1-202ENST00000342631 PRAMEF22A3QJZ6 481 aa20.91■□□□□ 0.94
SNED1-202ENST00000342631 STARD3NLO95772 234 aa20.91■□□□□ 0.94
SNED1-202ENST00000342631 SLC4A2P04920 1241 aa20.91■□□□□ 0.94
SNED1-202ENST00000342631 ARHGAP45Q92619 1136 aa20.91■□□□□ 0.94
SNED1-202ENST00000342631 USP16Q9Y5T5 823 aa20.91■□□□□ 0.94
SNED1-202ENST00000342631 LY75O60449 1722 aa20.9■□□□□ 0.94
SNED1-202ENST00000342631 HMGB2P26583 209 aaKnown RBP20.9■□□□□ 0.94
SNED1-202ENST00000342631 TRIM37O94972 964 aa20.9■□□□□ 0.94
SNED1-202ENST00000342631 PTF1AQ7RTS3 328 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms