RNA–Protein interactions for RNA: ENST00000342404.7

CCDC83-202, Transcript of coiled-coil domain containing 83, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC83, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83-202ENST00000342404 CHL1O00533 1208 aa11.19□□□□□ -0.62
CCDC83-202ENST00000342404 IRX6P78412 446 aaPredicted RBP11.19□□□□□ -0.62
CCDC83-202ENST00000342404 BARGINQ6ZT62 677 aa11.19□□□□□ -0.62
CCDC83-202ENST00000342404 SYTL4Q96C24 671 aaPredicted RBP11.19□□□□□ -0.62
CCDC83-202ENST00000342404 QTRT2Q9H974 415 aaKnown RBP11.19□□□□□ -0.62
CCDC83-202ENST00000342404 CABP4P57796 275 aa11.18□□□□□ -0.62
CCDC83-202ENST00000342404 TSPYL6Q8N831 410 aa11.18□□□□□ -0.62
CCDC83-202ENST00000342404 SLC52A2Q9HAB3 445 aa11.17□□□□□ -0.62
CCDC83-202ENST00000342404 SLC39A6Q13433 755 aa11.17□□□□□ -0.62
CCDC83-202ENST00000342404 TWISTNBQ3B726 338 aaPredicted RBP11.17□□□□□ -0.62
CCDC83-202ENST00000342404 C8orf58Q8NAV2 365 aa11.17□□□□□ -0.62
CCDC83-202ENST00000342404 GLI3P10071 1580 aa11.17□□□□□ -0.62
CCDC83-202ENST00000342404 TCERG1O14776 1098 aaKnown RBP11.16□□□□□ -0.62
CCDC83-202ENST00000342404 KCNQ3O43525 872 aa11.16□□□□□ -0.62
CCDC83-202ENST00000342404 BCAR3O75815 825 aa11.16□□□□□ -0.62
CCDC83-202ENST00000342404 NEFLP07196 543 aa11.16□□□□□ -0.62
CCDC83-202ENST00000342404 PLIN1O60240 522 aa11.16□□□□□ -0.62
CCDC83-202ENST00000342404 FAM182BQ5T319 152 aa11.16□□□□□ -0.62
CCDC83-202ENST00000342404 ATRNO75882 1429 aa11.15□□□□□ -0.62
CCDC83-202ENST00000342404 ADAMTS7Q9UKP4 1686 aa11.15□□□□□ -0.62
CCDC83-202ENST00000342404 CANXP27824 592 aaKnown RBP11.15□□□□□ -0.62
CCDC83-202ENST00000342404 ZNF772Q68DY9 489 aaPredicted RBP11.15□□□□□ -0.62
CCDC83-202ENST00000342404 MARCH10Q8NA82 808 aaPredicted RBP11.15□□□□□ -0.62
CCDC83-202ENST00000342404 NECTIN2Q92692 538 aa11.15□□□□□ -0.62
CCDC83-202ENST00000342404 FRAT1Q92837 279 aaPredicted RBP11.15□□□□□ -0.62
CCDC83-202ENST00000342404 ACSBG1Q96GR2 724 aa11.15□□□□□ -0.62
CCDC83-202ENST00000342404 SMC4Q9NTJ3 1288 aa11.15□□□□□ -0.62
CCDC83-202ENST00000342404 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
CCDC83-202ENST00000342404 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
CCDC83-202ENST00000342404 SIPA1L3O60292 1781 aaPredicted RBP11.15□□□□□ -0.62
CCDC83-202ENST00000342404 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.63
CCDC83-202ENST00000342404 RARSP54136 660 aaKnown RBP11.14□□□□□ -0.63
CCDC83-202ENST00000342404 TTC5Q8N0Z6 440 aa11.14□□□□□ -0.63
CCDC83-202ENST00000342404 ERVV-2B6SEH9 535 aa11.14□□□□□ -0.63
CCDC83-202ENST00000342404 RRP1P56182 461 aaKnown RBP11.14□□□□□ -0.63
CCDC83-202ENST00000342404 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
CCDC83-202ENST00000342404 ZNF790Q6PG37 636 aa11.14□□□□□ -0.63
CCDC83-202ENST00000342404 SEPT12Q8IYM1 358 aa11.14□□□□□ -0.63
CCDC83-202ENST00000342404 KDM3BQ7LBC6 1761 aa11.13□□□□□ -0.63
CCDC83-202ENST00000342404 DOT1LQ8TEK3 1739 aa11.13□□□□□ -0.63
CCDC83-202ENST00000342404 VAMP4O75379 141 aa11.13□□□□□ -0.63
CCDC83-202ENST00000342404 CT47B1P0C2W7 299 aaPredicted RBP11.13□□□□□ -0.63
CCDC83-202ENST00000342404 FKBP8Q14318 412 aa11.13□□□□□ -0.63
CCDC83-202ENST00000342404 SSH1Q8WYL5 1049 aa11.13□□□□□ -0.63
CCDC83-202ENST00000342404 MRC1P22897 1456 aa11.13□□□□□ -0.63
CCDC83-202ENST00000342404 ITGB4P16144 1822 aa11.13□□□□□ -0.63
CCDC83-202ENST00000342404 PRIM1P49642 420 aaKnown RBP11.12□□□□□ -0.63
CCDC83-202ENST00000342404 BABAM1Q9NWV8 329 aa11.12□□□□□ -0.63
CCDC83-202ENST00000342404 THSD7AQ9UPZ6 1657 aa11.12□□□□□ -0.63
CCDC83-202ENST00000342404 PTCD1O75127 700 aaKnown RBP11.12□□□□□ -0.63
CCDC83-202ENST00000342404 EIF2S2P20042 333 aaKnown RBP11.12□□□□□ -0.63
CCDC83-202ENST00000342404 EIF4A1P60842 406 aaKnown RBP11.12□□□□□ -0.63
CCDC83-202ENST00000342404 PIGBQ92521 554 aa11.11□□□□□ -0.63
CCDC83-202ENST00000342404 PRAMEF22A3QJZ6 481 aa11.1□□□□□ -0.63
CCDC83-202ENST00000342404 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.1□□□□□ -0.63
CCDC83-202ENST00000342404 ZNF496Q96IT1 587 aaPredicted RBP11.1□□□□□ -0.63
CCDC83-202ENST00000342404 KCNQ2O43526 872 aa11.1□□□□□ -0.63
CCDC83-202ENST00000342404 RBM6P78332 1123 aaKnown RBP11.1□□□□□ -0.63
CCDC83-202ENST00000342404 HDGFL1Q5TGJ6 251 aa11.1□□□□□ -0.63
CCDC83-202ENST00000342404 ASAP1Q9ULH1 1129 aa11.1□□□□□ -0.63
CCDC83-202ENST00000342404 CLUAP1Q96AJ1 413 aa11.09□□□□□ -0.63
CCDC83-202ENST00000342404 FMNL2Q96PY5 1086 aa11.09□□□□□ -0.63
CCDC83-202ENST00000342404 BCL9O00512 1426 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 GIGYF1O75420 1035 aaPredicted RBP11.08□□□□□ -0.64
CCDC83-202ENST00000342404 RXRBP28702 533 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 ALDH1L2Q3SY69 923 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 C20orf194Q5TEA3 1177 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 ZNF428Q96B54 188 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
CCDC83-202ENST00000342404 STK31Q9BXU1 1019 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 RGS17Q9UGC6 210 aaPredicted RBP11.08□□□□□ -0.64
CCDC83-202ENST00000342404 NOB1Q9ULX3 412 aaKnown RBP11.08□□□□□ -0.64
CCDC83-202ENST00000342404 BRWD3Q6RI45 1802 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
CCDC83-202ENST00000342404 SLC4A2P04920 1241 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 ILDR1Q86SU0 546 aaPredicted RBP11.08□□□□□ -0.64
CCDC83-202ENST00000342404 RNF123Q5XPI4 1314 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 KIF16BQ96L93 1317 aa11.08□□□□□ -0.64
CCDC83-202ENST00000342404 CCDC30Q5VVM6 783 aa11.07□□□□□ -0.64
CCDC83-202ENST00000342404 KRT27Q7Z3Y8 459 aa11.07□□□□□ -0.64
CCDC83-202ENST00000342404 FTSJ3Q8IY81 847 aaKnown RBP11.07□□□□□ -0.64
CCDC83-202ENST00000342404 C5P01031 1676 aa11.07□□□□□ -0.64
CCDC83-202ENST00000342404 ANXA1P04083 346 aa11.07□□□□□ -0.64
CCDC83-202ENST00000342404 SNRPA1P09661 255 aaKnown RBP11.07□□□□□ -0.64
CCDC83-202ENST00000342404 POTEAQ6S8J7 498 aa11.07□□□□□ -0.64
CCDC83-202ENST00000342404 MRPL50Q8N5N7 158 aaKnown RBP11.07□□□□□ -0.64
CCDC83-202ENST00000342404 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
CCDC83-202ENST00000342404 CHPF2Q9P2E5 772 aa11.07□□□□□ -0.64
CCDC83-202ENST00000342404 TNNQ9UQP3 1299 aa11.07□□□□□ -0.64
CCDC83-202ENST00000342404 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
CCDC83-202ENST00000342404 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
CCDC83-202ENST00000342404 PTF1AQ7RTS3 328 aa11.06□□□□□ -0.64
CCDC83-202ENST00000342404 PANK1Q8TE04 598 aa11.06□□□□□ -0.64
CCDC83-202ENST00000342404 PAPPAQ13219 1627 aa11.06□□□□□ -0.64
CCDC83-202ENST00000342404 UBR2Q8IWV8 1755 aa11.06□□□□□ -0.64
CCDC83-202ENST00000342404 TRIM27P14373 513 aa11.05□□□□□ -0.64
CCDC83-202ENST00000342404 USP16Q9Y5T5 823 aa11.05□□□□□ -0.64
CCDC83-202ENST00000342404 HEG1Q9ULI3 1381 aa11.05□□□□□ -0.64
CCDC83-202ENST00000342404 KCPQ6ZWJ8 1503 aa11.05□□□□□ -0.64
CCDC83-202ENST00000342404 HOXB7P09629 217 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms