RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 GABPB1Q06547 395 aaPredicted RBP8.7□□□□□ -1.02
LMO7-202ENST00000341547 SNW1Q13573 536 aaKnown RBP8.7□□□□□ -1.02
LMO7-202ENST00000341547 DDX19AQ9NUU7 478 aaKnown RBP8.7□□□□□ -1.02
LMO7-202ENST00000341547 SUPT6HQ7KZ85 1726 aaKnown RBP8.7□□□□□ -1.02
LMO7-202ENST00000341547 CCDC69A6NI79 296 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 SLC4A2P04920 1241 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 TRIM22Q8IYM9 498 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 CCDC150Q8NCX0 1101 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 NOL7Q9UMY1 257 aaKnown RBP8.69□□□□□ -1.02
LMO7-202ENST00000341547 SLC26A8Q96RN1 970 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 SCAND2PQ9GZW5 306 aaPredicted RBP8.69□□□□□ -1.02
LMO7-202ENST00000341547 KIF5CO60282 957 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 TTC31Q49AM3 519 aaPredicted RBP8.69□□□□□ -1.02
LMO7-202ENST00000341547 TTC39AQ5SRH9 613 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
LMO7-202ENST00000341547 GPRASP1Q5JY77 1395 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 MNAT1P51948 309 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 GDPD2Q9HCC8 539 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 FKBP4Q02790 459 aaKnown RBP eCLIP8.69□□□□□ -1.02
LMO7-202ENST00000341547 RPAP2Q8IXW5 612 aaPredicted RBP8.69□□□□□ -1.02
LMO7-202ENST00000341547 ATAD2BQ9ULI0 1458 aa8.69□□□□□ -1.02
LMO7-202ENST00000341547 RAB3GAP1Q15042 981 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 CCDC83Q8IWF9 413 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 CKAP2LQ8IYA6 745 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 RASSF4Q9H2L5 321 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 IFFO1Q0D2I5 559 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 UBE4AQ14139 1066 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 TMEM132EQ6IEE7 984 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 TAF4BQ92750 862 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 LARP6Q9BRS8 491 aaKnown RBP8.68□□□□□ -1.02
LMO7-202ENST00000341547 SH2B1Q9NRF2 756 aaPredicted RBP8.68□□□□□ -1.02
LMO7-202ENST00000341547 SYNJ1O43426 1573 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 RARSP54136 660 aaKnown RBP8.68□□□□□ -1.02
LMO7-202ENST00000341547 GUCY1B3Q02153 619 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 DDX54Q8TDD1 881 aaKnown RBP8.68□□□□□ -1.02
LMO7-202ENST00000341547 SPECC1Q5M775 1068 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 ZSWIM4Q9H7M6 989 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 IL1RAPL2Q9NP60 686 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 UBE2HP62256 183 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 BMP2KLQ5H9B9 411 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 CCDC91Q7Z6B0 441 aa8.68□□□□□ -1.02
LMO7-202ENST00000341547 STX1AQ16623 288 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 SMARCC1Q92922 1105 aaPredicted RBP8.67□□□□□ -1.02
LMO7-202ENST00000341547 PDS5BQ9NTI5 1447 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 SMC5Q8IY18 1101 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 RAPGEF4Q8WZA2 1011 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 ZNF830Q96NB3 372 aaPredicted RBP8.67□□□□□ -1.02
LMO7-202ENST00000341547 CNNM1Q9NRU3 951 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 CFTRP13569 1480 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 TOP1P11387 765 aaKnown RBP8.67□□□□□ -1.02
LMO7-202ENST00000341547 PRXQ9BXM0 1461 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 SLC3A2P08195 630 aaKnown RBP8.67□□□□□ -1.02
LMO7-202ENST00000341547 TMEM57Q8N5G2 664 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 CPLX3Q8WVH0 158 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 IMMTQ16891 758 aaKnown RBP8.67□□□□□ -1.02
LMO7-202ENST00000341547 ALDH1L2Q3SY69 923 aa8.67□□□□□ -1.02
LMO7-202ENST00000341547 CCDC158Q5M9N0 1113 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 DUSP27Q5VZP5 1158 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 ISM2Q6H9L7 571 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 CADPSQ9ULU8 1353 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 IGSF3O75054 1194 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 KRT32Q14532 448 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 CCDC178Q5BJE1 867 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 MYRIPQ8NFW9 859 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 FGD5Q6ZNL6 1462 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 A0A1B0GUL7 405 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 SPA17Q15506 151 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 LUZP1Q86V48 1076 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 NAIPQ13075 1403 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 IGHDP01880 384 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 SLU7O95391 586 aaKnown RBP8.66□□□□□ -1.02
LMO7-202ENST00000341547 HLTFQ14527 1009 aaKnown RBP eCLIP8.66□□□□□ -1.025e-7■□□□□ 8
LMO7-202ENST00000341547 WWC2Q6AWC2 1192 aa8.66□□□□□ -1.02
LMO7-202ENST00000341547 V9GYY5 206 aaPredicted RBP8.66□□□□□ -1.02
LMO7-202ENST00000341547 MAPKBP1O60336 1514 aa8.65□□□□□ -1.02
LMO7-202ENST00000341547 AACSQ86V21 672 aa8.65□□□□□ -1.02
LMO7-202ENST00000341547 CEP63Q96MT8 703 aa8.65□□□□□ -1.02
LMO7-202ENST00000341547 SERPINA10Q9UK55 444 aa8.65□□□□□ -1.02
LMO7-202ENST00000341547 HDGFL1Q5TGJ6 251 aa8.65□□□□□ -1.02
LMO7-202ENST00000341547 PLCD3Q8N3E9 789 aa8.65□□□□□ -1.02
LMO7-202ENST00000341547 ATP2C2O75185 946 aa8.65□□□□□ -1.02
LMO7-202ENST00000341547 UTP14CQ5TAP6 766 aaKnown RBP8.65□□□□□ -1.02
LMO7-202ENST00000341547 GSTTP1A0A1W2PQM5 241 aa8.65□□□□□ -1.03
LMO7-202ENST00000341547 CCDC175P0C221 793 aa8.65□□□□□ -1.03
LMO7-202ENST00000341547 MYL6BP14649 208 aa8.65□□□□□ -1.03
LMO7-202ENST00000341547 SPINK5Q9NQ38 1064 aaPredicted RBP8.65□□□□□ -1.03
LMO7-202ENST00000341547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.65□□□□□ -1.03
LMO7-202ENST00000341547 HECW1Q76N89 1606 aa8.65□□□□□ -1.03
LMO7-202ENST00000341547 ABCC11Q96J66 1382 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 SMARCA5O60264 1052 aaPredicted RBP8.64□□□□□ -1.03
LMO7-202ENST00000341547 TBC1D9Q6ZT07 1266 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.64□□□□□ -1.03
LMO7-202ENST00000341547 DAPK1P53355 1430 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 SRGAP3O43295 1099 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 MX1P20591 662 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 EXOC6BQ9Y2D4 811 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 TMC6Q7Z403 805 aa8.64□□□□□ -1.03
LMO7-202ENST00000341547 TFIP11Q9UBB9 837 aaKnown RBP8.64□□□□□ -1.03
LMO7-202ENST00000341547 BIN1O00499 593 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms