RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 NOL8Q76FK4 1167 aaKnown RBP18.77■□□□□ 0.6
PERM1-201ENST00000341290 INTS3Q68E01 1043 aaKnown RBP18.76■□□□□ 0.59
PERM1-201ENST00000341290 ANKRD44Q8N8A2 993 aa18.76■□□□□ 0.59
PERM1-201ENST00000341290 SLC4A2P04920 1241 aa18.76■□□□□ 0.59
PERM1-201ENST00000341290 EIF4A2Q14240 407 aaKnown RBP18.76■□□□□ 0.59
PERM1-201ENST00000341290 RBM27Q9P2N5 1060 aaKnown RBP18.76■□□□□ 0.59
PERM1-201ENST00000341290 FOXO3O43524 673 aa18.75■□□□□ 0.59
PERM1-201ENST00000341290 PRPF40AO75400 957 aaKnown RBP18.75■□□□□ 0.59
PERM1-201ENST00000341290 ISY1Q9ULR0 285 aaKnown RBP18.75■□□□□ 0.59
PERM1-201ENST00000341290 RBM10P98175 930 aaKnown RBP18.74■□□□□ 0.59
PERM1-201ENST00000341290 HSP90AB2PQ58FF8 381 aa18.74■□□□□ 0.59
PERM1-201ENST00000341290 NECTIN2Q92692 538 aa18.74■□□□□ 0.59
PERM1-201ENST00000341290 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
PERM1-201ENST00000341290 KLHL40Q2TBA0 621 aa18.74■□□□□ 0.59
PERM1-201ENST00000341290 CCDC61Q9Y6R9 512 aa18.74■□□□□ 0.59
PERM1-201ENST00000341290 G2E3Q7L622 706 aa18.74■□□□□ 0.59
PERM1-201ENST00000341290 FOXD4L6Q3SYB3 417 aaPredicted RBP18.73■□□□□ 0.59
PERM1-201ENST00000341290 FOXD4L3Q6VB84 417 aaPredicted RBP18.73■□□□□ 0.59
PERM1-201ENST00000341290 EXOC6BQ9Y2D4 811 aa18.73■□□□□ 0.59
PERM1-201ENST00000341290 MED1Q15648 1581 aaPredicted RBP18.73■□□□□ 0.59
PERM1-201ENST00000341290 PIK3C2AO00443 1686 aa18.72■□□□□ 0.59
PERM1-201ENST00000341290 CDK12Q9NYV4 1490 aaPredicted RBP18.72■□□□□ 0.59
PERM1-201ENST00000341290 DLG5Q8TDM6 1919 aa18.72■□□□□ 0.59
PERM1-201ENST00000341290 CADPS2Q86UW7 1296 aa18.72■□□□□ 0.59
PERM1-201ENST00000341290 ROBO1Q9Y6N7 1651 aa18.71■□□□□ 0.59
PERM1-201ENST00000341290 CASC1Q6TDU7 716 aa18.71■□□□□ 0.59
PERM1-201ENST00000341290 AATKQ6ZMQ8 1374 aa18.71■□□□□ 0.59
PERM1-201ENST00000341290 ATP10DQ9P241 1426 aa18.71■□□□□ 0.59
PERM1-201ENST00000341290 ZSCAN23Q3MJ62 389 aa18.71■□□□□ 0.59
PERM1-201ENST00000341290 ANP32BQ92688 251 aaKnown RBP18.71■□□□□ 0.59
PERM1-201ENST00000341290 LMBRD1Q9NUN5 540 aa18.71■□□□□ 0.59
PERM1-201ENST00000341290 RTL1A6NKG5 1358 aa18.71■□□□□ 0.59
PERM1-201ENST00000341290 RPAP2Q8IXW5 612 aaPredicted RBP18.71■□□□□ 0.59
PERM1-201ENST00000341290 USP6P35125 1406 aa18.71■□□□□ 0.58
PERM1-201ENST00000341290 PXDNQ92626 1479 aa18.71■□□□□ 0.58
PERM1-201ENST00000341290 PTMSP20962 102 aa18.7■□□□□ 0.58
PERM1-201ENST00000341290 TPRNQ4KMQ1 711 aa18.7■□□□□ 0.58
PERM1-201ENST00000341290 COL22A1Q8NFW1 1626 aaPredicted RBP18.7■□□□□ 0.58
PERM1-201ENST00000341290 PHRF1Q9P1Y6 1649 aaKnown RBP18.7■□□□□ 0.58
PERM1-201ENST00000341290 CHL1O00533 1208 aa18.7■□□□□ 0.58
PERM1-201ENST00000341290 ST18O60284 1047 aa18.7■□□□□ 0.58
PERM1-201ENST00000341290 NUCB2P80303 420 aa18.69■□□□□ 0.58
PERM1-201ENST00000341290 ZDHHC9Q9Y397 364 aa18.69■□□□□ 0.58
PERM1-201ENST00000341290 RGS12O14924 1447 aa18.69■□□□□ 0.58
PERM1-201ENST00000341290 PRIM1P49642 420 aaKnown RBP18.68■□□□□ 0.58
PERM1-201ENST00000341290 NEK4P51957 841 aa18.68■□□□□ 0.58
PERM1-201ENST00000341290 CCDC173Q0VFZ6 552 aa18.68■□□□□ 0.58
PERM1-201ENST00000341290 RBSNQ9H1K0 784 aa18.68■□□□□ 0.58
PERM1-201ENST00000341290 NSFL1CQ9UNZ2 370 aaKnown RBP18.68■□□□□ 0.58
PERM1-201ENST00000341290 ABCA3Q99758 1704 aa18.68■□□□□ 0.58
PERM1-201ENST00000341290 GPT2Q8TD30 523 aa18.68■□□□□ 0.58
PERM1-201ENST00000341290 ARID3AQ99856 593 aa18.68■□□□□ 0.58
PERM1-201ENST00000341290 TSPYL4Q9UJ04 414 aa18.66■□□□□ 0.58
PERM1-201ENST00000341290 ERC2O15083 957 aa18.66■□□□□ 0.58
PERM1-201ENST00000341290 CYP2E1P05181 493 aaPredicted RBP18.66■□□□□ 0.58
PERM1-201ENST00000341290 CLEC17AQ6ZS10 378 aa18.66■□□□□ 0.58
PERM1-201ENST00000341290 RILPL2Q969X0 211 aa18.66■□□□□ 0.58
PERM1-201ENST00000341290 PDCL3Q9H2J4 239 aa18.66■□□□□ 0.58
PERM1-201ENST00000341290 REC8O95072 547 aa18.66■□□□□ 0.58
PERM1-201ENST00000341290 USP31Q70CQ4 1352 aa18.65■□□□□ 0.58
PERM1-201ENST00000341290 PDE1AP54750 535 aa18.65■□□□□ 0.58
PERM1-201ENST00000341290 TRIM6-TRIM34B2RNG4 842 aa18.65■□□□□ 0.58
PERM1-201ENST00000341290 SLIT3O75094 1523 aa18.65■□□□□ 0.58
PERM1-201ENST00000341290 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
PERM1-201ENST00000341290 SYCE3A1L190 88 aa18.64■□□□□ 0.57
PERM1-201ENST00000341290 RNF214Q8ND24 703 aa18.64■□□□□ 0.57
PERM1-201ENST00000341290 COL16A1Q07092 1604 aaPredicted RBP18.64■□□□□ 0.57
PERM1-201ENST00000341290 PALD1Q9ULE6 856 aa18.64■□□□□ 0.57
PERM1-201ENST00000341290 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
PERM1-201ENST00000341290 ATF3P18847 181 aa18.63■□□□□ 0.57
PERM1-201ENST00000341290 MSNP26038 577 aaKnown RBP18.63■□□□□ 0.57
PERM1-201ENST00000341290 KIAA1211Q6ZU35 1233 aa18.63■□□□□ 0.57
PERM1-201ENST00000341290 PPP1R9BQ96SB3 815 aa18.63■□□□□ 0.57
PERM1-201ENST00000341290 ACEP12821 1306 aa18.63■□□□□ 0.57
PERM1-201ENST00000341290 MTHFSDQ2M296 383 aaKnown RBP18.63■□□□□ 0.57
PERM1-201ENST00000341290 ZSCAN30Q86W11 494 aa18.63■□□□□ 0.57
PERM1-201ENST00000341290 TTC21BQ7Z4L5 1316 aa18.62■□□□□ 0.57
PERM1-201ENST00000341290 RTF1Q92541 710 aaKnown RBP18.62■□□□□ 0.57
PERM1-201ENST00000341290 TMX3Q96JJ7 454 aa18.62■□□□□ 0.57
PERM1-201ENST00000341290 ANO2Q9NQ90 1003 aa18.62■□□□□ 0.57
PERM1-201ENST00000341290 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
PERM1-201ENST00000341290 TTC21AQ8NDW8 1320 aa18.62■□□□□ 0.57
PERM1-201ENST00000341290 OVOS2A0A0J9YW53 1432 aa18.62■□□□□ 0.57
PERM1-201ENST00000341290 OVOS2Q6IE36 1432 aa18.62■□□□□ 0.57
PERM1-201ENST00000341290 HMMRO75330 724 aa18.62■□□□□ 0.57
PERM1-201ENST00000341290 UPF3BQ9BZI7 483 aaKnown RBP18.62■□□□□ 0.57
PERM1-201ENST00000341290 PTPRCP08575 1304 aa18.62■□□□□ 0.57
PERM1-201ENST00000341290 PNMA6EA0A0J9YXQ4 647 aa18.61■□□□□ 0.57
PERM1-201ENST00000341290 ZNF445P59923 1031 aa18.61■□□□□ 0.57
PERM1-201ENST00000341290 CWC22Q9HCG8 908 aaKnown RBP18.61■□□□□ 0.57
PERM1-201ENST00000341290 PRDM4Q9UKN5 801 aa18.61■□□□□ 0.57
PERM1-201ENST00000341290 KIF24Q5T7B8 1368 aa18.61■□□□□ 0.57
PERM1-201ENST00000341290 GDPD2Q9HCC8 539 aa18.61■□□□□ 0.57
PERM1-201ENST00000341290 PHF8Q9UPP1 1060 aa18.61■□□□□ 0.57
PERM1-201ENST00000341290 MAP3K19Q56UN5 1328 aa18.61■□□□□ 0.57
PERM1-201ENST00000341290 ABCC6O95255 1503 aa18.61■□□□□ 0.57
PERM1-201ENST00000341290 PHLPP1O60346 1717 aa18.6■□□□□ 0.57
PERM1-201ENST00000341290 MAP4K4O95819 1239 aaPredicted RBP18.6■□□□□ 0.57
PERM1-201ENST00000341290 FKBP5Q13451 457 aaPredicted RBP18.6■□□□□ 0.57
PERM1-201ENST00000341290 DTNBO60941 627 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms