RNA–Protein interactions for RNA: ENST00000340811.8

PKP2-202, Transcript of plakophilin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-202ENST00000340811 IL17REQ8NFR9 667 aa15.06■□□□□ 0
PKP2-202ENST00000340811 SETD1BQ9UPS6 1966 aaKnown RBP15.06■□□□□ 0
PKP2-202ENST00000340811 ST18O60284 1047 aa15.06■□□□□ 0
PKP2-202ENST00000340811 NFKBIBQ15653 356 aa15.06■□□□□ 0
PKP2-202ENST00000340811 ZBTB3Q9H5J0 574 aa15.06■□□□□ 0
PKP2-202ENST00000340811 NLRP1Q9C000 1473 aa15.06■□□□□ 0
PKP2-202ENST00000340811 CHL1O00533 1208 aa15.05■□□□□ 0
PKP2-202ENST00000340811 SBNO1A3KN83 1393 aa15.05■□□□□ -0
PKP2-202ENST00000340811 TULP4Q9NRJ4 1543 aa15.05■□□□□ -0
PKP2-202ENST00000340811 CLTCQ00610 1675 aaKnown RBP15.05■□□□□ -0
PKP2-202ENST00000340811 C8orf34Q49A92 452 aa15.04■□□□□ -0
PKP2-202ENST00000340811 AMOTL1Q8IY63 956 aa15.04■□□□□ -0
PKP2-202ENST00000340811 IFNL2Q8IZJ0 200 aa15.04■□□□□ -0
PKP2-202ENST00000340811 DBF4Q9UBU7 674 aaPredicted RBP15.04■□□□□ -0
PKP2-202ENST00000340811 CNNM1Q9NRU3 951 aa15.04■□□□□ -0
PKP2-202ENST00000340811 DNAJC2Q99543 621 aaKnown RBP15.04■□□□□ -0
PKP2-202ENST00000340811 ZBTB7BO15156 539 aaPredicted RBP15.03■□□□□ -0
PKP2-202ENST00000340811 DIP2BQ9P265 1576 aa15.03■□□□□ -0
PKP2-202ENST00000340811 CWF19L2Q2TBE0 894 aaKnown RBP15.03■□□□□ -0
PKP2-202ENST00000340811 NEXMIFQ5QGS0 1516 aa15.03■□□□□ -0
PKP2-202ENST00000340811 TMEM94Q12767 1356 aa15.03■□□□□ -0
PKP2-202ENST00000340811 PPP1R42Q7Z4L9 355 aa15.03■□□□□ -0
PKP2-202ENST00000340811 RUFY2Q8WXA3 655 aa15.03■□□□□ -0
PKP2-202ENST00000340811 USP6P35125 1406 aa15.02■□□□□ -0
PKP2-202ENST00000340811 OTUD7AQ8TE49 926 aaPredicted RBP15.02■□□□□ -0
PKP2-202ENST00000340811 NEK4P51957 841 aa15.02□□□□□ -0.01
PKP2-202ENST00000340811 MPHOSPH8Q99549 860 aa15.02□□□□□ -0.01
PKP2-202ENST00000340811 AKAP4Q5JQC9 854 aa15.02□□□□□ -0.01
PKP2-202ENST00000340811 AACSQ86V21 672 aa15.02□□□□□ -0.01
PKP2-202ENST00000340811 COPS6Q7L5N1 327 aa15.01□□□□□ -0.01
PKP2-202ENST00000340811 WASHC4Q2M389 1173 aa15.01□□□□□ -0.01
PKP2-202ENST00000340811 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
PKP2-202ENST00000340811 CCDC8Q9H0W5 538 aaPredicted RBP15.01□□□□□ -0.01
PKP2-202ENST00000340811 KDM2BQ8NHM5 1336 aa15.01□□□□□ -0.01
PKP2-202ENST00000340811 HMGB2P26583 209 aaKnown RBP15.01□□□□□ -0.01
PKP2-202ENST00000340811 BCL11BQ9C0K0 894 aaPredicted RBP15.01□□□□□ -0.01
PKP2-202ENST00000340811 INSRP06213 1382 aa15.01□□□□□ -0.01
PKP2-202ENST00000340811 PTPRCP08575 1304 aa15.01□□□□□ -0.01
PKP2-202ENST00000340811 ZPR1O75312 459 aa15.01□□□□□ -0.01
PKP2-202ENST00000340811 PIK3C2BO00750 1634 aa15□□□□□ -0.01
PKP2-202ENST00000340811 HDAC1Q13547 482 aaPredicted RBP15□□□□□ -0.01
PKP2-202ENST00000340811 FSD1Q9BTV5 496 aa15□□□□□ -0.01
PKP2-202ENST00000340811 MAP3K5Q99683 1374 aa15□□□□□ -0.01
PKP2-202ENST00000340811 ERC2O15083 957 aa15□□□□□ -0.01
PKP2-202ENST00000340811 GPTP24298 496 aa15□□□□□ -0.01
PKP2-202ENST00000340811 CWC27Q6UX04 472 aaKnown RBP15□□□□□ -0.01
PKP2-202ENST00000340811 XAGE3Q8WTP9 111 aa15□□□□□ -0.01
PKP2-202ENST00000340811 PTPRMP28827 1452 aa15□□□□□ -0.01
PKP2-202ENST00000340811 SLAIN2Q9P270 581 aa15□□□□□ -0.01
PKP2-202ENST00000340811 CLSTN1O94985 981 aa14.99□□□□□ -0.01
PKP2-202ENST00000340811 UBE3BQ7Z3V4 1068 aa14.99□□□□□ -0.01
PKP2-202ENST00000340811 GBP4Q96PP9 640 aa14.99□□□□□ -0.01
PKP2-202ENST00000340811 PA2G4Q9UQ80 394 aaKnown RBP14.99□□□□□ -0.01
PKP2-202ENST00000340811 QRICH2Q9H0J4 1663 aa14.99□□□□□ -0.01
PKP2-202ENST00000340811 MROH1Q8NDA8 1641 aa14.99□□□□□ -0.01
PKP2-202ENST00000340811 RNMTO43148 476 aaKnown RBP14.99□□□□□ -0.01
PKP2-202ENST00000340811 NUCB1Q02818 461 aa14.99□□□□□ -0.01
PKP2-202ENST00000340811 CCDC57Q2TAC2 916 aa14.99□□□□□ -0.01
PKP2-202ENST00000340811 DDB1Q16531 1140 aa14.98□□□□□ -0.01
PKP2-202ENST00000340811 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
PKP2-202ENST00000340811 ACSBG1Q96GR2 724 aa14.98□□□□□ -0.01
PKP2-202ENST00000340811 A0A087WZG4 1122 aa14.98□□□□□ -0.01
PKP2-202ENST00000340811 ZCRB1Q8TBF4 217 aaKnown RBP14.98□□□□□ -0.01
PKP2-202ENST00000340811 MX1P20591 662 aa14.98□□□□□ -0.01
PKP2-202ENST00000340811 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
PKP2-202ENST00000340811 FMNL2Q96PY5 1086 aa14.98□□□□□ -0.01
PKP2-202ENST00000340811 UPF3BQ9BZI7 483 aaKnown RBP14.98□□□□□ -0.01
PKP2-202ENST00000340811 MROH2AA6NES4 1674 aa14.98□□□□□ -0.01
PKP2-202ENST00000340811 FAM135BQ49AJ0 1406 aa14.98□□□□□ -0.01
PKP2-202ENST00000340811 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
PKP2-202ENST00000340811 TRDNQ13061 729 aa14.97□□□□□ -0.01
PKP2-202ENST00000340811 VPS53Q5VIR6 699 aa14.97□□□□□ -0.01
PKP2-202ENST00000340811 CEP85Q6P2H3 762 aa14.97□□□□□ -0.01
PKP2-202ENST00000340811 LARP6Q9BRS8 491 aaKnown RBP14.97□□□□□ -0.01
PKP2-202ENST00000340811 BOLA2Q9H3K6 86 aa14.97□□□□□ -0.01
PKP2-202ENST00000340811 VWDEQ8N2E2 1590 aa14.97□□□□□ -0.01
PKP2-202ENST00000340811 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
PKP2-202ENST00000340811 BTG4Q9NY30 223 aa14.97□□□□□ -0.01
PKP2-202ENST00000340811 USP19O94966 1318 aa14.97□□□□□ -0.01
PKP2-202ENST00000340811 ZNF335Q9H4Z2 1342 aaPredicted RBP14.97□□□□□ -0.01
PKP2-202ENST00000340811 ATP7BP35670 1465 aa14.97□□□□□ -0.01
PKP2-202ENST00000340811 PTMAP06454 111 aaKnown RBP14.96□□□□□ -0.01
PKP2-202ENST00000340811 SYNE3Q6ZMZ3 975 aa14.96□□□□□ -0.01
PKP2-202ENST00000340811 ANKRD44Q8N8A2 993 aa14.96□□□□□ -0.01
PKP2-202ENST00000340811 AXIN2Q9Y2T1 843 aa14.96□□□□□ -0.01
PKP2-202ENST00000340811 ADGRB1O14514 1584 aa14.96□□□□□ -0.01
PKP2-202ENST00000340811 ZNF652Q9Y2D9 606 aa14.96□□□□□ -0.01
PKP2-202ENST00000340811 NPHP4O75161 1426 aaPredicted RBP14.96□□□□□ -0.01
PKP2-202ENST00000340811 DHX16O60231 1041 aaKnown RBP14.96□□□□□ -0.01
PKP2-202ENST00000340811 LARP1Q6PKG0 1096 aaKnown RBP14.96□□□□□ -0.01
PKP2-202ENST00000340811 CNTROBQ8N137 903 aa14.96□□□□□ -0.01
PKP2-202ENST00000340811 ARHGEF40Q8TER5 1519 aa14.96□□□□□ -0.02
PKP2-202ENST00000340811 MARCH6O60337 910 aa14.96□□□□□ -0.02
PKP2-202ENST00000340811 SMC5Q8IY18 1101 aa14.96□□□□□ -0.02
PKP2-202ENST00000340811 FOSBP53539 338 aa14.95□□□□□ -0.02
PKP2-202ENST00000340811 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
PKP2-202ENST00000340811 CHMP5Q9NZZ3 219 aa14.95□□□□□ -0.02
PKP2-202ENST00000340811 CTDP1Q9Y5B0 961 aaPredicted RBP14.95□□□□□ -0.02
PKP2-202ENST00000340811 ANKRD13DQ6ZTN6 518 aa14.95□□□□□ -0.02
PKP2-202ENST00000340811 TBC1D2Q9BYX2 928 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms