RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 RBM42Q9BTD8 480 aaKnown RBP30.01■■■□□ 2.39
PBX1-201ENST00000340699 MTFR1LQ9H019 292 aa30.01■■■□□ 2.39
PBX1-201ENST00000340699 PPP1R1BQ9UD71 204 aaPredicted RBP30.01■■■□□ 2.39
PBX1-201ENST00000340699 ATF5Q9Y2D1 282 aaPredicted RBP30.01■■■□□ 2.39
PBX1-201ENST00000340699 SLC52A2Q9HAB3 445 aa30■■■□□ 2.39
PBX1-201ENST00000340699 TAF1LQ8IZX4 1826 aa30■■■□□ 2.39
PBX1-201ENST00000340699 QSER1Q2KHR3 1735 aa29.99■■■□□ 2.39
PBX1-201ENST00000340699 PNPLA7Q6ZV29 1317 aa29.99■■■□□ 2.39
PBX1-201ENST00000340699 GNAT3A8MTJ3 354 aa29.99■■■□□ 2.39
PBX1-201ENST00000340699 PHACTR3Q96KR7 559 aa29.99■■■□□ 2.39
PBX1-201ENST00000340699 SLC16A10Q8TF71 515 aa29.98■■■□□ 2.39
PBX1-201ENST00000340699 AK7Q96M32 723 aa29.98■■■□□ 2.39
PBX1-201ENST00000340699 MAP3K5Q99683 1374 aa29.98■■■□□ 2.39
PBX1-201ENST00000340699 MYBBP1AQ9BQG0 1328 aaKnown RBP29.97■■■□□ 2.39
PBX1-201ENST00000340699 SRCAPQ6ZRS2 3230 aa29.97■■■□□ 2.39
PBX1-201ENST00000340699 MSH5O43196 834 aa29.97■■■□□ 2.39
PBX1-201ENST00000340699 NEFMP07197 916 aa29.97■■■□□ 2.39
PBX1-201ENST00000340699 ZNF316A6NFI3 1004 aaPredicted RBP29.96■■■□□ 2.39
PBX1-201ENST00000340699 VIRMAQ69YN4 1812 aaKnown RBP29.96■■■□□ 2.39
PBX1-201ENST00000340699 FLAD1Q8NFF5 587 aa29.95■■■□□ 2.39
PBX1-201ENST00000340699 C4BP0C0L5 1744 aa29.95■■■□□ 2.38
PBX1-201ENST00000340699 TUBGCP6Q96RT7 1819 aa29.94■■■□□ 2.38
PBX1-201ENST00000340699 ITPK1Q13572 414 aa29.94■■■□□ 2.38
PBX1-201ENST00000340699 LINC00116Q8NCU8 138 aa29.94■■■□□ 2.38
PBX1-201ENST00000340699 PTCD1O75127 700 aaKnown RBP29.93■■■□□ 2.38
PBX1-201ENST00000340699 PNNQ9H307 717 aaKnown RBP29.93■■■□□ 2.38
PBX1-201ENST00000340699 MRC1P22897 1456 aa29.92■■■□□ 2.38
PBX1-201ENST00000340699 ADAMTS7Q9UKP4 1686 aa29.91■■■□□ 2.38
PBX1-201ENST00000340699 TEFQ10587 303 aa29.91■■■□□ 2.38
PBX1-201ENST00000340699 COL23A1Q86Y22 540 aaPredicted RBP29.91■■■□□ 2.38
PBX1-201ENST00000340699 PTGER2P43116 358 aa29.9■■■□□ 2.38
PBX1-201ENST00000340699 IL17REQ8NFR9 667 aa29.9■■■□□ 2.38
PBX1-201ENST00000340699 SLC4A9Q96Q91 983 aa29.9■■■□□ 2.38
PBX1-201ENST00000340699 ZNF831Q5JPB2 1677 aa29.9■■■□□ 2.38
PBX1-201ENST00000340699 RTF1Q92541 710 aaKnown RBP29.89■■■□□ 2.38
PBX1-201ENST00000340699 PRKRIP1Q9H875 184 aaPredicted RBP29.89■■■□□ 2.38
PBX1-201ENST00000340699 GNPATO15228 680 aa29.87■■■□□ 2.37
PBX1-201ENST00000340699 SLC39A6Q13433 755 aa29.87■■■□□ 2.37
PBX1-201ENST00000340699 PHF14O94880 888 aa29.86■■■□□ 2.37
PBX1-201ENST00000340699 POLD1P28340 1107 aa29.86■■■□□ 2.37
PBX1-201ENST00000340699 SSFA2P28290 1259 aa29.85■■■□□ 2.37
PBX1-201ENST00000340699 TTC5Q8N0Z6 440 aa29.85■■■□□ 2.37
PBX1-201ENST00000340699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.84■■■□□ 2.37
PBX1-201ENST00000340699 RC3H1Q5TC82 1133 aaKnown RBP29.84■■■□□ 2.37
PBX1-201ENST00000340699 SGIP1Q9BQI5 828 aa29.84■■■□□ 2.37
PBX1-201ENST00000340699 MAPK8IP3Q9UPT6 1336 aa29.84■■■□□ 2.37
PBX1-201ENST00000340699 UBR3Q6ZT12 1888 aa29.83■■■□□ 2.37
PBX1-201ENST00000340699 HTATSF1O43719 755 aaKnown RBP29.83■■■□□ 2.37
PBX1-201ENST00000340699 PLEKHF1Q96S99 279 aa29.83■■■□□ 2.37
PBX1-201ENST00000340699 CEMIPQ8WUJ3 1361 aa29.82■■■□□ 2.36
PBX1-201ENST00000340699 ARXQ96QS3 562 aa29.82■■■□□ 2.36
PBX1-201ENST00000340699 RTCBQ9Y3I0 505 aaKnown RBP29.82■■■□□ 2.36
PBX1-201ENST00000340699 CNTNAP4Q9C0A0 1308 aa29.81■■■□□ 2.36
PBX1-201ENST00000340699 COL5A3P25940 1745 aaPredicted RBP29.8■■■□□ 2.36
PBX1-201ENST00000340699 MCM10Q7L590 875 aa29.8■■■□□ 2.36
PBX1-201ENST00000340699 AMIGO3Q86WK7 504 aa29.8■■■□□ 2.36
PBX1-201ENST00000340699 WDR43Q15061 677 aaKnown RBP eCLIP29.79■■■□□ 2.36
PBX1-201ENST00000340699 TRAPPC3LQ5T215 181 aa29.79■■■□□ 2.36
PBX1-201ENST00000340699 SMIM5Q71RC9 77 aa29.79■■■□□ 2.36
PBX1-201ENST00000340699 BTBD11A6QL63 1104 aa29.77■■■□□ 2.36
PBX1-201ENST00000340699 RPS6KA4O75676 772 aa29.77■■■□□ 2.36
PBX1-201ENST00000340699 CRKLP46109 303 aaKnown RBP29.77■■■□□ 2.36
PBX1-201ENST00000340699 NFE2L2Q16236 605 aa29.77■■■□□ 2.36
PBX1-201ENST00000340699 MSL1Q68DK7 614 aa29.77■■■□□ 2.36
PBX1-201ENST00000340699 ZNF790Q6PG37 636 aa29.77■■■□□ 2.36
PBX1-201ENST00000340699 DNAJC10Q8IXB1 793 aa29.77■■■□□ 2.36
PBX1-201ENST00000340699 VSIG10Q8N0Z9 540 aa29.77■■■□□ 2.36
PBX1-201ENST00000340699 SIPA1L3O60292 1781 aaPredicted RBP29.76■■■□□ 2.35
PBX1-201ENST00000340699 KCPQ6ZWJ8 1503 aa29.76■■■□□ 2.35
PBX1-201ENST00000340699 ADRA2BP18089 450 aa29.75■■■□□ 2.35
PBX1-201ENST00000340699 TJP1Q07157 1748 aa29.75■■■□□ 2.35
PBX1-201ENST00000340699 DCTN1Q14203 1278 aa29.75■■■□□ 2.35
PBX1-201ENST00000340699 COL24A1Q17RW2 1714 aa29.75■■■□□ 2.35
PBX1-201ENST00000340699 CICQ96RK0 1608 aaPredicted RBP29.74■■■□□ 2.35
PBX1-201ENST00000340699 FHDC1Q9C0D6 1143 aaPredicted RBP29.74■■■□□ 2.35
PBX1-201ENST00000340699 FMNL2Q96PY5 1086 aa29.72■■■□□ 2.35
PBX1-201ENST00000340699 UBR2Q8IWV8 1755 aa29.72■■■□□ 2.35
PBX1-201ENST00000340699 RFC4P35249 363 aa29.71■■■□□ 2.35
PBX1-201ENST00000340699 ARHGEF1Q92888 912 aaKnown RBP29.71■■■□□ 2.35
PBX1-201ENST00000340699 ZNF496Q96IT1 587 aaPredicted RBP29.71■■■□□ 2.35
PBX1-201ENST00000340699 SYT17Q9BSW7 474 aa29.71■■■□□ 2.35
PBX1-201ENST00000340699 CCDC87Q9NVE4 849 aa29.71■■■□□ 2.35
PBX1-201ENST00000340699 DLG5Q8TDM6 1919 aa29.71■■■□□ 2.35
PBX1-201ENST00000340699 MYH14Q7Z406 1995 aaKnown RBP29.7■■■□□ 2.35
PBX1-201ENST00000340699 DCAF8L1A6NGE4 600 aa29.7■■■□□ 2.35
PBX1-201ENST00000340699 CYP19A1P11511 503 aaPredicted RBP29.7■■■□□ 2.35
PBX1-201ENST00000340699 KLHL34Q8N239 644 aa29.7■■■□□ 2.35
PBX1-201ENST00000340699 TEX13AQ9BXU3 409 aaPredicted RBP29.7■■■□□ 2.35
PBX1-201ENST00000340699 STARD3NLO95772 234 aa29.69■■■□□ 2.34
PBX1-201ENST00000340699 TAF7Q15545 349 aaPredicted RBP29.69■■■□□ 2.34
PBX1-201ENST00000340699 INTS5Q6P9B9 1019 aaKnown RBP29.69■■■□□ 2.34
PBX1-201ENST00000340699 HEG1Q9ULI3 1381 aa29.68■■■□□ 2.34
PBX1-201ENST00000340699 ANP32CO43423 234 aa29.68■■■□□ 2.34
PBX1-201ENST00000340699 ADAMTS8Q9UP79 889 aa29.68■■■□□ 2.34
PBX1-201ENST00000340699 RIPK4P57078 832 aa29.67■■■□□ 2.34
PBX1-201ENST00000340699 CCDC146Q8IYE0 955 aa29.67■■■□□ 2.34
PBX1-201ENST00000340699 KCNQ3O43525 872 aa29.66■■■□□ 2.34
PBX1-201ENST00000340699 RUNDC1Q96C34 613 aa29.66■■■□□ 2.34
PBX1-201ENST00000340699 PNISRQ8TF01 805 aaKnown RBP29.65■■■□□ 2.34
PBX1-201ENST00000340699 TMPOP42166 694 aaKnown RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms