RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
C2orf88-201ENST00000340623 DBF4Q9UBU7 674 aaPredicted RBP14.62□□□□□ -0.07
C2orf88-201ENST00000340623 SOS2Q07890 1332 aaPredicted RBP14.62□□□□□ -0.07
C2orf88-201ENST00000340623 VAMP4O75379 141 aa14.62□□□□□ -0.07
C2orf88-201ENST00000340623 SNRPA1P09661 255 aaKnown RBP14.62□□□□□ -0.07
C2orf88-201ENST00000340623 FLIIQ13045 1269 aa14.62□□□□□ -0.07
C2orf88-201ENST00000340623 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.61□□□□□ -0.07
C2orf88-201ENST00000340623 CHPF2Q9P2E5 772 aa14.61□□□□□ -0.07
C2orf88-201ENST00000340623 GNAI3P08754 354 aa14.61□□□□□ -0.07
C2orf88-201ENST00000340623 PHKG2P15735 406 aa14.61□□□□□ -0.07
C2orf88-201ENST00000340623 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
C2orf88-201ENST00000340623 CHL1O00533 1208 aa14.6□□□□□ -0.07
C2orf88-201ENST00000340623 HSPA1LP34931 641 aa14.6□□□□□ -0.07
C2orf88-201ENST00000340623 TNNQ9UQP3 1299 aa14.6□□□□□ -0.07
C2orf88-201ENST00000340623 CCT4P50991 539 aaKnown RBP14.6□□□□□ -0.07
C2orf88-201ENST00000340623 PNPLA6Q8IY17 1366 aa14.6□□□□□ -0.07
C2orf88-201ENST00000340623 PRIM1P49642 420 aaKnown RBP14.59□□□□□ -0.07
C2orf88-201ENST00000340623 SF3B2Q13435 895 aaKnown RBP14.59□□□□□ -0.07
C2orf88-201ENST00000340623 KCNQ3O43525 872 aa14.59□□□□□ -0.07
C2orf88-201ENST00000340623 CDCA7Q9BWT1 371 aaPredicted RBP14.59□□□□□ -0.07
C2orf88-201ENST00000340623 ZBTB3Q9H5J0 574 aa14.59□□□□□ -0.07
C2orf88-201ENST00000340623 ZNF790Q6PG37 636 aa14.58□□□□□ -0.07
C2orf88-201ENST00000340623 GORABQ5T7V8 394 aa14.58□□□□□ -0.08
C2orf88-201ENST00000340623 LNPKQ9C0E8 428 aa14.58□□□□□ -0.08
C2orf88-201ENST00000340623 SLC52A2Q9HAB3 445 aa14.58□□□□□ -0.08
C2orf88-201ENST00000340623 ITSN1Q15811 1721 aa14.58□□□□□ -0.08
C2orf88-201ENST00000340623 PI4KAP2A4QPH2 592 aa14.57□□□□□ -0.08
C2orf88-201ENST00000340623 CASC1Q6TDU7 716 aa14.57□□□□□ -0.08
C2orf88-201ENST00000340623 PI4KAP1Q8N8J0 262 aa14.57□□□□□ -0.08
C2orf88-201ENST00000340623 PDE4AP27815 886 aa14.57□□□□□ -0.08
C2orf88-201ENST00000340623 GNAI2P04899 355 aa14.57□□□□□ -0.08
C2orf88-201ENST00000340623 FAM182BQ5T319 152 aa14.57□□□□□ -0.08
C2orf88-201ENST00000340623 HYPKQ9NX55 129 aa14.57□□□□□ -0.08
C2orf88-201ENST00000340623 USP19O94966 1318 aa14.56□□□□□ -0.08
C2orf88-201ENST00000340623 BICDL1Q6ZP65 573 aa14.56□□□□□ -0.08
C2orf88-201ENST00000340623 MYD88Q99836 296 aa14.56□□□□□ -0.08
C2orf88-201ENST00000340623 DNAAF4Q8WXU2 420 aa14.56□□□□□ -0.08
C2orf88-201ENST00000340623 ZNF496Q96IT1 587 aaPredicted RBP14.56□□□□□ -0.08
C2orf88-201ENST00000340623 MRPL50Q8N5N7 158 aaKnown RBP14.56□□□□□ -0.08
C2orf88-201ENST00000340623 QTRT2Q9H974 415 aaKnown RBP14.56□□□□□ -0.08
C2orf88-201ENST00000340623 ATP6V1AP38606 617 aa14.55□□□□□ -0.08
C2orf88-201ENST00000340623 TRIM6-TRIM34B2RNG4 842 aa14.55□□□□□ -0.08
C2orf88-201ENST00000340623 COPS6Q7L5N1 327 aa14.55□□□□□ -0.08
C2orf88-201ENST00000340623 UNC5CLQ8IV45 518 aa14.55□□□□□ -0.08
C2orf88-201ENST00000340623 XAGE3Q8WTP9 111 aa14.55□□□□□ -0.08
C2orf88-201ENST00000340623 SURF6O75683 361 aaKnown RBP14.54□□□□□ -0.08
C2orf88-201ENST00000340623 MAP3K2Q9Y2U5 619 aa14.54□□□□□ -0.08
C2orf88-201ENST00000340623 JCADQ9P266 1359 aa14.54□□□□□ -0.08
C2orf88-201ENST00000340623 ATP5J2-PTCD1G3V325 749 aa14.54□□□□□ -0.08
C2orf88-201ENST00000340623 CCDC85AQ96PX6 553 aaPredicted RBP14.54□□□□□ -0.08
C2orf88-201ENST00000340623 ZNF521Q96K83 1311 aa14.54□□□□□ -0.08
C2orf88-201ENST00000340623 G3BP1Q13283 466 aaKnown RBP eCLIP14.54□□□□□ -0.08
C2orf88-201ENST00000340623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.54□□□□□ -0.08
C2orf88-201ENST00000340623 G2E3Q7L622 706 aa14.53□□□□□ -0.08
C2orf88-201ENST00000340623 TEX13AQ9BXU3 409 aaPredicted RBP14.53□□□□□ -0.08
C2orf88-201ENST00000340623 PHAXQ9H814 394 aaKnown RBP14.53□□□□□ -0.08
C2orf88-201ENST00000340623 RLBP1P12271 317 aa14.53□□□□□ -0.08
C2orf88-201ENST00000340623 GPTP24298 496 aa14.53□□□□□ -0.08
C2orf88-201ENST00000340623 AAMPQ13685 434 aa14.53□□□□□ -0.08
C2orf88-201ENST00000340623 TRPC5Q9UL62 973 aaPredicted RBP14.53□□□□□ -0.08
C2orf88-201ENST00000340623 PTPRCP08575 1304 aa14.53□□□□□ -0.08
C2orf88-201ENST00000340623 CYP27B1O15528 508 aa14.53□□□□□ -0.08
C2orf88-201ENST00000340623 MYOM1P52179 1685 aa14.53□□□□□ -0.08
C2orf88-201ENST00000340623 EIF4A1P60842 406 aaKnown RBP14.52□□□□□ -0.08
C2orf88-201ENST00000340623 JARID2Q92833 1246 aaPredicted RBP14.52□□□□□ -0.08
C2orf88-201ENST00000340623 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
C2orf88-201ENST00000340623 IPO9Q96P70 1041 aaKnown RBP14.52□□□□□ -0.09
C2orf88-201ENST00000340623 AFF2P51816 1311 aa14.51□□□□□ -0.09
C2orf88-201ENST00000340623 ANKRD13DQ6ZTN6 518 aa14.51□□□□□ -0.09
C2orf88-201ENST00000340623 SMARCC1Q92922 1105 aaPredicted RBP14.51□□□□□ -0.09
C2orf88-201ENST00000340623 SIL1Q9H173 461 aa14.51□□□□□ -0.09
C2orf88-201ENST00000340623 SLKQ9H2G2 1235 aaPredicted RBP14.51□□□□□ -0.09
C2orf88-201ENST00000340623 ZNF142P52746 1687 aaPredicted RBP14.51□□□□□ -0.09
C2orf88-201ENST00000340623 SRGAP3O43295 1099 aa14.5□□□□□ -0.09
C2orf88-201ENST00000340623 GPATCH3Q96I76 525 aa14.5□□□□□ -0.09
C2orf88-201ENST00000340623 PHF14O94880 888 aa14.5□□□□□ -0.09
C2orf88-201ENST00000340623 A1BGP04217 495 aa14.5□□□□□ -0.09
C2orf88-201ENST00000340623 KCNJ4P48050 445 aa14.5□□□□□ -0.09
C2orf88-201ENST00000340623 DNAJC10Q8IXB1 793 aa14.5□□□□□ -0.09
C2orf88-201ENST00000340623 KNDC1Q76NI1 1749 aa14.5□□□□□ -0.09
C2orf88-201ENST00000340623 ERVV-2B6SEH9 535 aa14.5□□□□□ -0.09
C2orf88-201ENST00000340623 BABAM1Q9NWV8 329 aa14.5□□□□□ -0.09
C2orf88-201ENST00000340623 DDRGK1Q96HY6 314 aa14.49□□□□□ -0.09
C2orf88-201ENST00000340623 TMX4Q9H1E5 349 aaPredicted RBP14.49□□□□□ -0.09
C2orf88-201ENST00000340623 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
C2orf88-201ENST00000340623 RILPL2Q969X0 211 aa14.49□□□□□ -0.09
C2orf88-201ENST00000340623 MEIS3Q99687 375 aa14.49□□□□□ -0.09
C2orf88-201ENST00000340623 PDZRN3Q9UPQ7 1066 aa14.49□□□□□ -0.09
C2orf88-201ENST00000340623 TBC1D2BQ9UPU7 963 aa14.49□□□□□ -0.09
C2orf88-201ENST00000340623 XRN1Q8IZH2 1706 aaKnown RBP14.48□□□□□ -0.09
C2orf88-201ENST00000340623 A0A087WZG4 1122 aa14.48□□□□□ -0.09
C2orf88-201ENST00000340623 IFIT2P09913 472 aaKnown RBP14.48□□□□□ -0.09
C2orf88-201ENST00000340623 ASAP1Q9ULH1 1129 aa14.48□□□□□ -0.09
C2orf88-201ENST00000340623 USP16Q9Y5T5 823 aa14.48□□□□□ -0.09
C2orf88-201ENST00000340623 LRRFIP2Q9Y608 721 aaKnown RBP14.48□□□□□ -0.09
C2orf88-201ENST00000340623 ADGRB2O60241 1585 aa14.48□□□□□ -0.09
C2orf88-201ENST00000340623 ZPR1O75312 459 aa14.48□□□□□ -0.09
C2orf88-201ENST00000340623 ARHGAP45Q92619 1136 aa14.48□□□□□ -0.09
C2orf88-201ENST00000340623 AK7Q96M32 723 aa14.48□□□□□ -0.09
C2orf88-201ENST00000340623 FRAT2O75474 233 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms