RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 SIPA1L3O60292 1781 aaPredicted RBP18.84■□□□□ 0.61
CTSL-201ENST00000340342 NEFMP07197 916 aa18.83■□□□□ 0.61
CTSL-201ENST00000340342 CABP4P57796 275 aa18.83■□□□□ 0.61
CTSL-201ENST00000340342 PNNQ9H307 717 aaKnown RBP18.83■□□□□ 0.61
CTSL-201ENST00000340342 PALLDQ8WX93 1383 aa18.83■□□□□ 0.61
CTSL-201ENST00000340342 MRC1P22897 1456 aa18.83■□□□□ 0.61
CTSL-201ENST00000340342 LRP5O75197 1615 aa18.83■□□□□ 0.6
CTSL-201ENST00000340342 PAPPAQ13219 1627 aa18.83■□□□□ 0.6
CTSL-201ENST00000340342 KCNQ4P56696 695 aa18.83■□□□□ 0.6
CTSL-201ENST00000340342 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
CTSL-201ENST00000340342 AKT1S1Q96B36 256 aa18.83■□□□□ 0.6
CTSL-201ENST00000340342 IL17REQ8NFR9 667 aa18.82■□□□□ 0.6
CTSL-201ENST00000340342 PNISRQ8TF01 805 aaKnown RBP18.82■□□□□ 0.6
CTSL-201ENST00000340342 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
CTSL-201ENST00000340342 NFE2L2Q16236 605 aa18.81■□□□□ 0.6
CTSL-201ENST00000340342 DCTN1Q14203 1278 aa18.8■□□□□ 0.6
CTSL-201ENST00000340342 MCM10Q7L590 875 aa18.8■□□□□ 0.6
CTSL-201ENST00000340342 RUNDC1Q96C34 613 aa18.8■□□□□ 0.6
CTSL-201ENST00000340342 SLC52A2Q9HAB3 445 aa18.8■□□□□ 0.6
CTSL-201ENST00000340342 SPON1Q9HCB6 807 aa18.8■□□□□ 0.6
CTSL-201ENST00000340342 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
CTSL-201ENST00000340342 TAF1LQ8IZX4 1826 aa18.8■□□□□ 0.6
CTSL-201ENST00000340342 CEMIPQ8WUJ3 1361 aa18.79■□□□□ 0.6
CTSL-201ENST00000340342 ZNF827Q17R98 1081 aa18.79■□□□□ 0.6
CTSL-201ENST00000340342 RRP7AQ9Y3A4 280 aaKnown RBP18.79■□□□□ 0.6
CTSL-201ENST00000340342 LOC102724428A0A0B4J2F2 783 aa18.78■□□□□ 0.6
CTSL-201ENST00000340342 SIK1P57059 783 aa18.78■□□□□ 0.6
CTSL-201ENST00000340342 RTF1Q92541 710 aaKnown RBP18.78■□□□□ 0.6
CTSL-201ENST00000340342 PDGFDQ9GZP0 370 aaPredicted RBP18.78■□□□□ 0.6
CTSL-201ENST00000340342 TFCP2L1Q9NZI6 479 aa18.78■□□□□ 0.6
CTSL-201ENST00000340342 CASZ1Q86V15 1759 aa18.78■□□□□ 0.6
CTSL-201ENST00000340342 TMPOP42166 694 aaKnown RBP18.77■□□□□ 0.6
CTSL-201ENST00000340342 C5P01031 1676 aa18.77■□□□□ 0.6
CTSL-201ENST00000340342 QSER1Q2KHR3 1735 aa18.77■□□□□ 0.6
CTSL-201ENST00000340342 NEUROD2Q15784 382 aa18.76■□□□□ 0.59
CTSL-201ENST00000340342 UBR2Q8IWV8 1755 aa18.75■□□□□ 0.59
CTSL-201ENST00000340342 RIPK4P57078 832 aa18.75■□□□□ 0.59
CTSL-201ENST00000340342 TEFQ10587 303 aa18.75■□□□□ 0.59
CTSL-201ENST00000340342 THUMPD2Q9BTF0 503 aaKnown RBP18.75■□□□□ 0.59
CTSL-201ENST00000340342 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
CTSL-201ENST00000340342 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
CTSL-201ENST00000340342 ATP6V1AP38606 617 aa18.74■□□□□ 0.59
CTSL-201ENST00000340342 SLC39A6Q13433 755 aa18.74■□□□□ 0.59
CTSL-201ENST00000340342 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
CTSL-201ENST00000340342 MIER1Q8N108 512 aa18.74■□□□□ 0.59
CTSL-201ENST00000340342 SLC16A10Q8TF71 515 aa18.74■□□□□ 0.59
CTSL-201ENST00000340342 APAF1O14727 1248 aa18.74■□□□□ 0.59
CTSL-201ENST00000340342 MTFR1LQ9H019 292 aa18.74■□□□□ 0.59
CTSL-201ENST00000340342 TUBGCP6Q96RT7 1819 aa18.73■□□□□ 0.59
CTSL-201ENST00000340342 PTCD1O75127 700 aaKnown RBP18.73■□□□□ 0.59
CTSL-201ENST00000340342 ZBTB7AO95365 584 aa18.73■□□□□ 0.59
CTSL-201ENST00000340342 RBM42Q9BTD8 480 aaKnown RBP18.73■□□□□ 0.59
CTSL-201ENST00000340342 PNPLA7Q6ZV29 1317 aa18.73■□□□□ 0.59
CTSL-201ENST00000340342 KCPQ6ZWJ8 1503 aa18.72■□□□□ 0.59
CTSL-201ENST00000340342 ZNF831Q5JPB2 1677 aa18.72■□□□□ 0.59
CTSL-201ENST00000340342 FLAD1Q8NFF5 587 aa18.72■□□□□ 0.59
CTSL-201ENST00000340342 SLC4A9Q96Q91 983 aa18.72■□□□□ 0.59
CTSL-201ENST00000340342 TJP1Q07157 1748 aa18.72■□□□□ 0.59
CTSL-201ENST00000340342 C4BP0C0L5 1744 aa18.71■□□□□ 0.59
CTSL-201ENST00000340342 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
CTSL-201ENST00000340342 ATF5Q9Y2D1 282 aaPredicted RBP18.71■□□□□ 0.59
CTSL-201ENST00000340342 CCER2I3L3R5 266 aa18.7■□□□□ 0.58
CTSL-201ENST00000340342 ITPK1Q13572 414 aa18.7■□□□□ 0.58
CTSL-201ENST00000340342 AK7Q96M32 723 aa18.7■□□□□ 0.58
CTSL-201ENST00000340342 TRIM35Q9UPQ4 493 aa18.7■□□□□ 0.58
CTSL-201ENST00000340342 KDM3BQ7LBC6 1761 aa18.7■□□□□ 0.58
CTSL-201ENST00000340342 BTBD11A6QL63 1104 aa18.69■□□□□ 0.58
CTSL-201ENST00000340342 LINC00116Q8NCU8 138 aa18.69■□□□□ 0.58
CTSL-201ENST00000340342 PPP1R1BQ9UD71 204 aaPredicted RBP18.69■□□□□ 0.58
CTSL-201ENST00000340342 KCNQ3O43525 872 aa18.68■□□□□ 0.58
CTSL-201ENST00000340342 PTGER2P43116 358 aa18.68■□□□□ 0.58
CTSL-201ENST00000340342 LMOD3Q0VAK6 560 aa18.68■□□□□ 0.58
CTSL-201ENST00000340342 COL23A1Q86Y22 540 aaPredicted RBP18.68■□□□□ 0.58
CTSL-201ENST00000340342 MIS18AQ9NYP9 233 aa18.68■□□□□ 0.58
CTSL-201ENST00000340342 MYH14Q7Z406 1995 aaKnown RBP18.68■□□□□ 0.58
CTSL-201ENST00000340342 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
CTSL-201ENST00000340342 RC3H1Q5TC82 1133 aaKnown RBP18.67■□□□□ 0.58
CTSL-201ENST00000340342 ZNF790Q6PG37 636 aa18.67■□□□□ 0.58
CTSL-201ENST00000340342 UBR3Q6ZT12 1888 aa18.67■□□□□ 0.58
CTSL-201ENST00000340342 MSH5O43196 834 aa18.66■□□□□ 0.58
CTSL-201ENST00000340342 TAF7Q15545 349 aaPredicted RBP18.66■□□□□ 0.58
CTSL-201ENST00000340342 TTC5Q8N0Z6 440 aa18.66■□□□□ 0.58
CTSL-201ENST00000340342 SGIP1Q9BQI5 828 aa18.66■□□□□ 0.58
CTSL-201ENST00000340342 SSFA2P28290 1259 aa18.66■□□□□ 0.58
CTSL-201ENST00000340342 ZNF496Q96IT1 587 aaPredicted RBP18.65■□□□□ 0.58
CTSL-201ENST00000340342 GNPATO15228 680 aa18.64■□□□□ 0.57
CTSL-201ENST00000340342 CNTNAP4Q9C0A0 1308 aa18.63■□□□□ 0.57
CTSL-201ENST00000340342 COL24A1Q17RW2 1714 aa18.63■□□□□ 0.57
CTSL-201ENST00000340342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.63■□□□□ 0.57
CTSL-201ENST00000340342 DNAJC10Q8IXB1 793 aa18.63■□□□□ 0.57
CTSL-201ENST00000340342 VSIG10Q8N0Z9 540 aa18.63■□□□□ 0.57
CTSL-201ENST00000340342 RTCBQ9Y3I0 505 aaKnown RBP18.63■□□□□ 0.57
CTSL-201ENST00000340342 POLD1P28340 1107 aa18.62■□□□□ 0.57
CTSL-201ENST00000340342 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
CTSL-201ENST00000340342 AMIGO3Q86WK7 504 aa18.62■□□□□ 0.57
CTSL-201ENST00000340342 SALL2Q9Y467 1007 aaPredicted RBP18.62■□□□□ 0.57
CTSL-201ENST00000340342 HEG1Q9ULI3 1381 aa18.62■□□□□ 0.57
CTSL-201ENST00000340342 RPS6KA4O75676 772 aa18.61■□□□□ 0.57
CTSL-201ENST00000340342 PHF14O94880 888 aa18.61■□□□□ 0.57
CTSL-201ENST00000340342 TRAPPC3LQ5T215 181 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms