RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ZEB1P37275 1124 aaPredicted RBP19.6■□□□□ 0.73
ERCC1-203ENST00000340192 NFATC2IPQ8NCF5 419 aa19.6■□□□□ 0.73
ERCC1-203ENST00000340192 UBR3Q6ZT12 1888 aa19.6■□□□□ 0.73
ERCC1-203ENST00000340192 LGR6Q9HBX8 967 aa19.59■□□□□ 0.73
ERCC1-203ENST00000340192 NUDCQ9Y266 331 aa19.59■□□□□ 0.73
ERCC1-203ENST00000340192 COL24A1Q17RW2 1714 aa19.59■□□□□ 0.73
ERCC1-203ENST00000340192 ATP6V1AP38606 617 aa19.58■□□□□ 0.72
ERCC1-203ENST00000340192 ITPK1Q13572 414 aa19.58■□□□□ 0.72
ERCC1-203ENST00000340192 LINC00116Q8NCU8 138 aa19.58■□□□□ 0.72
ERCC1-203ENST00000340192 SLC16A10Q8TF71 515 aa19.58■□□□□ 0.72
ERCC1-203ENST00000340192 SGIP1Q9BQI5 828 aa19.58■□□□□ 0.72
ERCC1-203ENST00000340192 MRC1P22897 1456 aa19.58■□□□□ 0.72
ERCC1-203ENST00000340192 COL5A3P25940 1745 aaPredicted RBP19.57■□□□□ 0.72
ERCC1-203ENST00000340192 RNMTO43148 476 aaKnown RBP19.57■□□□□ 0.72
ERCC1-203ENST00000340192 COL23A1Q86Y22 540 aaPredicted RBP19.57■□□□□ 0.72
ERCC1-203ENST00000340192 AK7Q96M32 723 aa19.57■□□□□ 0.72
ERCC1-203ENST00000340192 RBM42Q9BTD8 480 aaKnown RBP19.57■□□□□ 0.72
ERCC1-203ENST00000340192 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
ERCC1-203ENST00000340192 MSH5O43196 834 aa19.56■□□□□ 0.72
ERCC1-203ENST00000340192 U2AF1L5P0DN76 240 aaPredicted RBP19.56■□□□□ 0.72
ERCC1-203ENST00000340192 PRKAR2BP31323 418 aa19.56■□□□□ 0.72
ERCC1-203ENST00000340192 U2AF1Q01081 240 aaKnown RBP eCLIP19.56■□□□□ 0.72
ERCC1-203ENST00000340192 SLC52A2Q9HAB3 445 aa19.56■□□□□ 0.72
ERCC1-203ENST00000340192 SLC4A9Q96Q91 983 aa19.55■□□□□ 0.72
ERCC1-203ENST00000340192 AMIGO3Q86WK7 504 aa19.54■□□□□ 0.72
ERCC1-203ENST00000340192 GAS2L2Q8NHY3 880 aa19.54■□□□□ 0.72
ERCC1-203ENST00000340192 PHACTR3Q96KR7 559 aa19.54■□□□□ 0.72
ERCC1-203ENST00000340192 MAP3K5Q99683 1374 aa19.54■□□□□ 0.72
ERCC1-203ENST00000340192 PTCD1O75127 700 aaKnown RBP19.53■□□□□ 0.72
ERCC1-203ENST00000340192 RALBP1Q15311 655 aa19.53■□□□□ 0.72
ERCC1-203ENST00000340192 FLAD1Q8NFF5 587 aa19.53■□□□□ 0.72
ERCC1-203ENST00000340192 CICQ96RK0 1608 aaPredicted RBP19.52■□□□□ 0.72
ERCC1-203ENST00000340192 TJP1Q07157 1748 aa19.52■□□□□ 0.72
ERCC1-203ENST00000340192 GNAT3A8MTJ3 354 aa19.52■□□□□ 0.72
ERCC1-203ENST00000340192 FCHSD2O94868 740 aa19.52■□□□□ 0.72
ERCC1-203ENST00000340192 PHF14O94880 888 aa19.52■□□□□ 0.72
ERCC1-203ENST00000340192 SIPA1L3O60292 1781 aaPredicted RBP19.52■□□□□ 0.71
ERCC1-203ENST00000340192 SMIM5Q71RC9 77 aa19.51■□□□□ 0.71
ERCC1-203ENST00000340192 ARXQ96QS3 562 aa19.51■□□□□ 0.71
ERCC1-203ENST00000340192 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.5■□□□□ 0.71
ERCC1-203ENST00000340192 GNPATO15228 680 aa19.5■□□□□ 0.71
ERCC1-203ENST00000340192 SSFA2P28290 1259 aa19.5■□□□□ 0.71
ERCC1-203ENST00000340192 POLD1P28340 1107 aa19.5■□□□□ 0.71
ERCC1-203ENST00000340192 MYH14Q7Z406 1995 aaKnown RBP19.5■□□□□ 0.71
ERCC1-203ENST00000340192 UBR2Q8IWV8 1755 aa19.49■□□□□ 0.71
ERCC1-203ENST00000340192 IL17REQ8NFR9 667 aa19.49■□□□□ 0.71
ERCC1-203ENST00000340192 FHDC1Q9C0D6 1143 aaPredicted RBP19.49■□□□□ 0.71
ERCC1-203ENST00000340192 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
ERCC1-203ENST00000340192 SLC39A6Q13433 755 aa19.48■□□□□ 0.71
ERCC1-203ENST00000340192 MSL1Q68DK7 614 aa19.48■□□□□ 0.71
ERCC1-203ENST00000340192 RC3H1Q5TC82 1133 aaKnown RBP19.47■□□□□ 0.71
ERCC1-203ENST00000340192 TEFQ10587 303 aa19.46■□□□□ 0.71
ERCC1-203ENST00000340192 SYT17Q9BSW7 474 aa19.46■□□□□ 0.71
ERCC1-203ENST00000340192 DLG5Q8TDM6 1919 aa19.46■□□□□ 0.71
ERCC1-203ENST00000340192 MYBBP1AQ9BQG0 1328 aaKnown RBP19.46■□□□□ 0.71
ERCC1-203ENST00000340192 CNTNAP4Q9C0A0 1308 aa19.46■□□□□ 0.71
ERCC1-203ENST00000340192 CEMIPQ8WUJ3 1361 aa19.45■□□□□ 0.7
ERCC1-203ENST00000340192 RTCBQ9Y3I0 505 aaKnown RBP19.45■□□□□ 0.7
ERCC1-203ENST00000340192 C4AP0C0L4 1744 aa19.44■□□□□ 0.7
ERCC1-203ENST00000340192 CRKLP46109 303 aaKnown RBP19.43■□□□□ 0.7
ERCC1-203ENST00000340192 RPS6KA4O75676 772 aa19.42■□□□□ 0.7
ERCC1-203ENST00000340192 TRAPPC3LQ5T215 181 aa19.42■□□□□ 0.7
ERCC1-203ENST00000340192 DNAJC10Q8IXB1 793 aa19.42■□□□□ 0.7
ERCC1-203ENST00000340192 TTC5Q8N0Z6 440 aa19.42■□□□□ 0.7
ERCC1-203ENST00000340192 KLHL34Q8N239 644 aa19.42■□□□□ 0.7
ERCC1-203ENST00000340192 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
ERCC1-203ENST00000340192 PLEKHF1Q96S99 279 aa19.42■□□□□ 0.7
ERCC1-203ENST00000340192 NEFMP07197 916 aa19.41■□□□□ 0.7
ERCC1-203ENST00000340192 MCM10Q7L590 875 aa19.41■□□□□ 0.7
ERCC1-203ENST00000340192 GOLGB1Q14789 3259 aaKnown RBP19.41■□□□□ 0.7
ERCC1-203ENST00000340192 ADRA2BP18089 450 aa19.4■□□□□ 0.7
ERCC1-203ENST00000340192 ZNF790Q6PG37 636 aa19.4■□□□□ 0.7
ERCC1-203ENST00000340192 ARHGEF1Q92888 912 aaKnown RBP19.4■□□□□ 0.7
ERCC1-203ENST00000340192 PRKRIP1Q9H875 184 aaPredicted RBP19.4■□□□□ 0.7
ERCC1-203ENST00000340192 UTRNP46939 3433 aa19.4■□□□□ 0.7
ERCC1-203ENST00000340192 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
ERCC1-203ENST00000340192 HTATSF1O43719 755 aaKnown RBP19.39■□□□□ 0.69
ERCC1-203ENST00000340192 DCTN1Q14203 1278 aa19.39■□□□□ 0.69
ERCC1-203ENST00000340192 INTS5Q6P9B9 1019 aaKnown RBP19.39■□□□□ 0.69
ERCC1-203ENST00000340192 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
ERCC1-203ENST00000340192 PNNQ9H307 717 aaKnown RBP19.39■□□□□ 0.69
ERCC1-203ENST00000340192 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
ERCC1-203ENST00000340192 CYP19A1P11511 503 aaPredicted RBP19.38■□□□□ 0.69
ERCC1-203ENST00000340192 RFC4P35249 363 aa19.38■□□□□ 0.69
ERCC1-203ENST00000340192 ZNF496Q96IT1 587 aaPredicted RBP19.38■□□□□ 0.69
ERCC1-203ENST00000340192 CCDC87Q9NVE4 849 aa19.38■□□□□ 0.69
ERCC1-203ENST00000340192 MAPK8IP3Q9UPT6 1336 aa19.37■□□□□ 0.69
ERCC1-203ENST00000340192 HEG1Q9ULI3 1381 aa19.36■□□□□ 0.69
ERCC1-203ENST00000340192 NFE2L2Q16236 605 aa19.36■□□□□ 0.69
ERCC1-203ENST00000340192 ZNF316A6NFI3 1004 aaPredicted RBP19.35■□□□□ 0.69
ERCC1-203ENST00000340192 KCNQ3O43525 872 aa19.35■□□□□ 0.69
ERCC1-203ENST00000340192 NLGN2Q8NFZ4 835 aa19.35■□□□□ 0.69
ERCC1-203ENST00000340192 GYS1P13807 737 aa19.34■□□□□ 0.69
ERCC1-203ENST00000340192 FMNL2Q96PY5 1086 aa19.34■□□□□ 0.69
ERCC1-203ENST00000340192 SOS1Q07889 1333 aaPredicted RBP19.33■□□□□ 0.69
ERCC1-203ENST00000340192 STARD3NLO95772 234 aa19.33■□□□□ 0.68
ERCC1-203ENST00000340192 MMP10P09238 476 aa19.33■□□□□ 0.68
ERCC1-203ENST00000340192 NLGN1Q8N2Q7 840 aa19.33■□□□□ 0.68
ERCC1-203ENST00000340192 ZBTB1Q9Y2K1 713 aa19.33■□□□□ 0.68
ERCC1-203ENST00000340192 CD2APQ9Y5K6 639 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms