RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 IFT57Q9NWB7 429 aa19.18■□□□□ 0.66
CSRP1-201ENST00000340006 CEMIPQ8WUJ3 1361 aa19.18■□□□□ 0.66
CSRP1-201ENST00000340006 TSPYL4Q9UJ04 414 aa19.17■□□□□ 0.66
CSRP1-201ENST00000340006 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
CSRP1-201ENST00000340006 PRIM1P49642 420 aaKnown RBP19.17■□□□□ 0.66
CSRP1-201ENST00000340006 TSR2Q969E8 191 aaKnown RBP19.17■□□□□ 0.66
CSRP1-201ENST00000340006 TMOD3Q9NYL9 352 aa19.17■□□□□ 0.66
CSRP1-201ENST00000340006 BRWD3Q6RI45 1802 aa19.16■□□□□ 0.66
CSRP1-201ENST00000340006 CHL1O00533 1208 aa19.15■□□□□ 0.66
CSRP1-201ENST00000340006 MBIPQ9NS73 344 aa19.15■□□□□ 0.66
CSRP1-201ENST00000340006 ZNF853P0CG23 659 aa19.14■□□□□ 0.65
CSRP1-201ENST00000340006 BABAM1Q9NWV8 329 aa19.13■□□□□ 0.65
CSRP1-201ENST00000340006 SLC39A6Q13433 755 aa19.12■□□□□ 0.65
CSRP1-201ENST00000340006 DUSP27Q5VZP5 1158 aa19.12■□□□□ 0.65
CSRP1-201ENST00000340006 FAM196AQ6ZSG2 479 aa19.12■□□□□ 0.65
CSRP1-201ENST00000340006 TRMT2AQ8IZ69 625 aaKnown RBP19.12■□□□□ 0.65
CSRP1-201ENST00000340006 TTC5Q8N0Z6 440 aa19.12■□□□□ 0.65
CSRP1-201ENST00000340006 PIGBQ92521 554 aa19.12■□□□□ 0.65
CSRP1-201ENST00000340006 FANCIQ9NVI1 1328 aa19.11■□□□□ 0.65
CSRP1-201ENST00000340006 ITGB4P16144 1822 aa19.11■□□□□ 0.65
CSRP1-201ENST00000340006 KCNQ2O43526 872 aa19.11■□□□□ 0.65
CSRP1-201ENST00000340006 ADAMTS7Q9UKP4 1686 aa19.11■□□□□ 0.65
CSRP1-201ENST00000340006 ELL2O00472 640 aaPredicted RBP19.1■□□□□ 0.65
CSRP1-201ENST00000340006 RGS12O14924 1447 aa19.1■□□□□ 0.65
CSRP1-201ENST00000340006 EXOSC9Q06265 439 aaKnown RBP19.1■□□□□ 0.65
CSRP1-201ENST00000340006 ZNF790Q6PG37 636 aa19.1■□□□□ 0.65
CSRP1-201ENST00000340006 KCNQ3O43525 872 aa19.09■□□□□ 0.65
CSRP1-201ENST00000340006 DOT1LQ8TEK3 1739 aa19.09■□□□□ 0.65
CSRP1-201ENST00000340006 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.65
CSRP1-201ENST00000340006 SIPA1L3O60292 1781 aaPredicted RBP19.08■□□□□ 0.64
CSRP1-201ENST00000340006 ASAP1Q9ULH1 1129 aa19.07■□□□□ 0.64
CSRP1-201ENST00000340006 EP400Q96L91 3159 aa19.06■□□□□ 0.64
CSRP1-201ENST00000340006 PTCD1O75127 700 aaKnown RBP19.06■□□□□ 0.64
CSRP1-201ENST00000340006 BCL9O00512 1426 aa19.06■□□□□ 0.64
CSRP1-201ENST00000340006 TRIM37O94972 964 aa19.05■□□□□ 0.64
CSRP1-201ENST00000340006 KRT24Q2M2I5 525 aa19.05■□□□□ 0.64
CSRP1-201ENST00000340006 C8orf58Q8NAV2 365 aa19.05■□□□□ 0.64
CSRP1-201ENST00000340006 ATG3Q9NT62 314 aa19.05■□□□□ 0.64
CSRP1-201ENST00000340006 MRC1P22897 1456 aa19.05■□□□□ 0.64
CSRP1-201ENST00000340006 EIF4A1P60842 406 aaKnown RBP19.04■□□□□ 0.64
CSRP1-201ENST00000340006 RBM42Q9BTD8 480 aaKnown RBP19.04■□□□□ 0.64
CSRP1-201ENST00000340006 TWISTNBQ3B726 338 aaPredicted RBP19.04■□□□□ 0.64
CSRP1-201ENST00000340006 PTF1AQ7RTS3 328 aa19.04■□□□□ 0.64
CSRP1-201ENST00000340006 FMNL2Q96PY5 1086 aa19.04■□□□□ 0.64
CSRP1-201ENST00000340006 SBF2Q86WG5 1849 aa19.03■□□□□ 0.64
CSRP1-201ENST00000340006 TSPYL6Q8N831 410 aa19.03■□□□□ 0.64
CSRP1-201ENST00000340006 BCL11BQ9C0K0 894 aaPredicted RBP19.03■□□□□ 0.64
CSRP1-201ENST00000340006 ZNF496Q96IT1 587 aaPredicted RBP19.02■□□□□ 0.64
CSRP1-201ENST00000340006 KDM3BQ7LBC6 1761 aa19.02■□□□□ 0.63
CSRP1-201ENST00000340006 SMARCC1Q92922 1105 aaPredicted RBP19.01■□□□□ 0.63
CSRP1-201ENST00000340006 VAMP4O75379 141 aa19■□□□□ 0.63
CSRP1-201ENST00000340006 EIF2S2P20042 333 aaKnown RBP19■□□□□ 0.63
CSRP1-201ENST00000340006 GIGYF1O75420 1035 aaPredicted RBP18.99■□□□□ 0.63
CSRP1-201ENST00000340006 SNRPA1P09661 255 aaKnown RBP18.99■□□□□ 0.63
CSRP1-201ENST00000340006 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
CSRP1-201ENST00000340006 CT47B1P0C2W7 299 aaPredicted RBP18.99■□□□□ 0.63
CSRP1-201ENST00000340006 RCAN3Q9UKA8 241 aa18.99■□□□□ 0.63
CSRP1-201ENST00000340006 NHSQ6T4R5 1651 aa18.98■□□□□ 0.63
CSRP1-201ENST00000340006 BTAF1O14981 1849 aa18.97■□□□□ 0.63
CSRP1-201ENST00000340006 PRAMEF22A3QJZ6 481 aa18.97■□□□□ 0.63
CSRP1-201ENST00000340006 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
CSRP1-201ENST00000340006 CHMP4AQ9BY43 222 aa18.97■□□□□ 0.63
CSRP1-201ENST00000340006 GTF3C3Q9Y5Q9 886 aa18.97■□□□□ 0.63
CSRP1-201ENST00000340006 APBA3O96018 575 aa18.96■□□□□ 0.63
CSRP1-201ENST00000340006 ATP6V1AP38606 617 aa18.96■□□□□ 0.63
CSRP1-201ENST00000340006 PALLDQ8WX93 1383 aa18.96■□□□□ 0.63
CSRP1-201ENST00000340006 LOC102724428A0A0B4J2F2 783 aa18.95■□□□□ 0.62
CSRP1-201ENST00000340006 SIK1P57059 783 aa18.95■□□□□ 0.62
CSRP1-201ENST00000340006 HDGFL1Q5TGJ6 251 aa18.95■□□□□ 0.62
CSRP1-201ENST00000340006 USP16Q9Y5T5 823 aa18.95■□□□□ 0.62
CSRP1-201ENST00000340006 HEG1Q9ULI3 1381 aa18.95■□□□□ 0.62
CSRP1-201ENST00000340006 CCDC30Q5VVM6 783 aa18.95■□□□□ 0.62
CSRP1-201ENST00000340006 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
CSRP1-201ENST00000340006 ZNF428Q96B54 188 aa18.95■□□□□ 0.62
CSRP1-201ENST00000340006 TEX13AQ9BXU3 409 aaPredicted RBP18.95■□□□□ 0.62
CSRP1-201ENST00000340006 SUPT16HQ9Y5B9 1047 aaKnown RBP18.95■□□□□ 0.62
CSRP1-201ENST00000340006 SOS1Q07889 1333 aaPredicted RBP18.95■□□□□ 0.62
CSRP1-201ENST00000340006 HOXB7P09629 217 aa18.94■□□□□ 0.62
CSRP1-201ENST00000340006 BCL2L13Q9BXK5 485 aa18.94■□□□□ 0.62
CSRP1-201ENST00000340006 RARSP54136 660 aaKnown RBP18.93■□□□□ 0.62
CSRP1-201ENST00000340006 SF3B2Q13435 895 aaKnown RBP18.93■□□□□ 0.62
CSRP1-201ENST00000340006 STK31Q9BXU1 1019 aa18.93■□□□□ 0.62
CSRP1-201ENST00000340006 PAPPAQ13219 1627 aa18.93■□□□□ 0.62
CSRP1-201ENST00000340006 UBR2Q8IWV8 1755 aa18.93■□□□□ 0.62
CSRP1-201ENST00000340006 SMC4Q9NTJ3 1288 aa18.93■□□□□ 0.62
CSRP1-201ENST00000340006 BCAR3O75815 825 aa18.92■□□□□ 0.62
CSRP1-201ENST00000340006 STARD3NLO95772 234 aa18.92■□□□□ 0.62
CSRP1-201ENST00000340006 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
CSRP1-201ENST00000340006 DNAJC10Q8IXB1 793 aa18.92■□□□□ 0.62
CSRP1-201ENST00000340006 SSH1Q8WYL5 1049 aa18.92■□□□□ 0.62
CSRP1-201ENST00000340006 KCPQ6ZWJ8 1503 aa18.92■□□□□ 0.62
CSRP1-201ENST00000340006 KCNQ4P56696 695 aa18.92■□□□□ 0.62
CSRP1-201ENST00000340006 SLC4A9Q96Q91 983 aa18.92■□□□□ 0.62
CSRP1-201ENST00000340006 ALDH1L2Q3SY69 923 aa18.91■□□□□ 0.62
CSRP1-201ENST00000340006 CCNL1Q9UK58 526 aaPredicted RBP18.91■□□□□ 0.62
CSRP1-201ENST00000340006 FRAT1Q92837 279 aaPredicted RBP18.89■□□□□ 0.61
CSRP1-201ENST00000340006 DBF4Q9UBU7 674 aaPredicted RBP18.89■□□□□ 0.61
CSRP1-201ENST00000340006 PLSCR1O15162 318 aa18.88■□□□□ 0.61
CSRP1-201ENST00000340006 A1BGP04217 495 aa18.88■□□□□ 0.61
CSRP1-201ENST00000340006 MYL6BP14649 208 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms