RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 GPT2Q8TD30 523 aa14.84□□□□□ -0.03
RIOK3-201ENST00000339486 ARHGEF5Q12774 1597 aa14.84□□□□□ -0.03
RIOK3-201ENST00000339486 PUS7Q96PZ0 661 aaKnown RBP14.83□□□□□ -0.03
RIOK3-201ENST00000339486 FANCAO15360 1455 aa14.83□□□□□ -0.03
RIOK3-201ENST00000339486 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.04
RIOK3-201ENST00000339486 ZNF500O60304 480 aaPredicted RBP14.83□□□□□ -0.04
RIOK3-201ENST00000339486 NLRP6P59044 892 aa14.83□□□□□ -0.04
RIOK3-201ENST00000339486 AIMP1Q12904 312 aaKnown RBP14.82□□□□□ -0.04
RIOK3-201ENST00000339486 ZSCAN31Q96LW9 406 aaPredicted RBP14.82□□□□□ -0.04
RIOK3-201ENST00000339486 ZSCAN22P10073 491 aaPredicted RBP14.82□□□□□ -0.04
RIOK3-201ENST00000339486 TFIP11Q9UBB9 837 aaKnown RBP14.82□□□□□ -0.04
RIOK3-201ENST00000339486 KINO60870 393 aaKnown RBP14.82□□□□□ -0.04
RIOK3-201ENST00000339486 FLIIQ13045 1269 aa14.82□□□□□ -0.04
RIOK3-201ENST00000339486 BLOC1S2Q6QNY1 142 aa14.82□□□□□ -0.04
RIOK3-201ENST00000339486 PLEKHF1Q96S99 279 aa14.82□□□□□ -0.04
RIOK3-201ENST00000339486 CCDC94Q9BW85 323 aaPredicted RBP14.82□□□□□ -0.04
RIOK3-201ENST00000339486 GORABQ5T7V8 394 aa14.82□□□□□ -0.04
RIOK3-201ENST00000339486 PPIP5K1Q6PFW1 1433 aa14.81□□□□□ -0.04
RIOK3-201ENST00000339486 IGSF3O75054 1194 aa14.81□□□□□ -0.04
RIOK3-201ENST00000339486 GJB2P29033 226 aa14.81□□□□□ -0.04
RIOK3-201ENST00000339486 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
RIOK3-201ENST00000339486 GADD45BO75293 160 aaPredicted RBP14.81□□□□□ -0.04
RIOK3-201ENST00000339486 TNNT1P13805 278 aa14.81□□□□□ -0.04
RIOK3-201ENST00000339486 ANAPC15P60006 121 aa14.81□□□□□ -0.04
RIOK3-201ENST00000339486 KIF1BPQ96EK5 621 aa14.81□□□□□ -0.04
RIOK3-201ENST00000339486 DTNBO60941 627 aa14.8□□□□□ -0.04
RIOK3-201ENST00000339486 KDM5AP29375 1690 aaKnown RBP14.8□□□□□ -0.04
RIOK3-201ENST00000339486 FBXO31Q5XUX0 539 aaPredicted RBP14.8□□□□□ -0.04
RIOK3-201ENST00000339486 ATP10AO60312 1499 aa14.8□□□□□ -0.04
RIOK3-201ENST00000339486 MNS1Q8NEH6 495 aa14.8□□□□□ -0.04
RIOK3-201ENST00000339486 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
RIOK3-201ENST00000339486 ZNF518AQ6AHZ1 1483 aa14.79□□□□□ -0.04
RIOK3-201ENST00000339486 RAB11FIP3O75154 756 aa14.79□□□□□ -0.04
RIOK3-201ENST00000339486 INTS4Q96HW7 963 aaKnown RBP14.79□□□□□ -0.04
RIOK3-201ENST00000339486 DNM1Q05193 864 aaKnown RBP14.79□□□□□ -0.04
RIOK3-201ENST00000339486 NEXNQ0ZGT2 675 aa14.79□□□□□ -0.04
RIOK3-201ENST00000339486 SIRT2Q8IXJ6 389 aa14.79□□□□□ -0.04
RIOK3-201ENST00000339486 SIL1Q9H173 461 aa14.79□□□□□ -0.04
RIOK3-201ENST00000339486 SMC2O95347 1197 aa14.79□□□□□ -0.04
RIOK3-201ENST00000339486 CHMLP26374 656 aa14.79□□□□□ -0.04
RIOK3-201ENST00000339486 AACSQ86V21 672 aa14.79□□□□□ -0.04
RIOK3-201ENST00000339486 SAMD9LQ8IVG5 1584 aa14.79□□□□□ -0.04
RIOK3-201ENST00000339486 GLRX3O76003 335 aaKnown RBP14.78□□□□□ -0.04
RIOK3-201ENST00000339486 DDX11Q96FC9 970 aa14.78□□□□□ -0.04
RIOK3-201ENST00000339486 SBNO2Q9Y2G9 1366 aa14.78□□□□□ -0.04
RIOK3-201ENST00000339486 C1orf141Q5JVX7 400 aa14.78□□□□□ -0.04
RIOK3-201ENST00000339486 NECAB1Q8N987 351 aa14.78□□□□□ -0.04
RIOK3-201ENST00000339486 CCDC66A2RUB6 948 aa14.78□□□□□ -0.04
RIOK3-201ENST00000339486 CCDC186Q7Z3E2 898 aa14.78□□□□□ -0.04
RIOK3-201ENST00000339486 WASLO00401 505 aaPredicted RBP14.77□□□□□ -0.04
RIOK3-201ENST00000339486 SMAP1Q8IYB5 467 aaPredicted RBP14.77□□□□□ -0.04
RIOK3-201ENST00000339486 NAT10Q9H0A0 1025 aaKnown RBP14.77□□□□□ -0.04
RIOK3-201ENST00000339486 ZNF330Q9Y3S2 320 aaPredicted RBP14.77□□□□□ -0.04
RIOK3-201ENST00000339486 BRD1O95696 1058 aa14.77□□□□□ -0.04
RIOK3-201ENST00000339486 MYRIPQ8NFW9 859 aa14.77□□□□□ -0.04
RIOK3-201ENST00000339486 SH2B1Q9NRF2 756 aaPredicted RBP14.77□□□□□ -0.04
RIOK3-201ENST00000339486 EID1Q9Y6B2 187 aa14.77□□□□□ -0.04
RIOK3-201ENST00000339486 ABCC4O15439 1325 aa14.77□□□□□ -0.05
RIOK3-201ENST00000339486 KDM4AO75164 1064 aa14.77□□□□□ -0.05
RIOK3-201ENST00000339486 ANKRD1Q15327 319 aa14.77□□□□□ -0.05
RIOK3-201ENST00000339486 PPP1R42Q7Z4L9 355 aa14.77□□□□□ -0.05
RIOK3-201ENST00000339486 CLIP2Q9UDT6 1046 aa14.77□□□□□ -0.05
RIOK3-201ENST00000339486 F13A1P00488 732 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 HSP90AB2PQ58FF8 381 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 TEX35Q5T0J7 233 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 PIBF1Q8WXW3 757 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 MSH6P52701 1360 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 ERICH4A6NGS2 130 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 CPLX1O14810 134 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 DDX58O95786 925 aaKnown RBP14.76□□□□□ -0.05
RIOK3-201ENST00000339486 G2E3Q7L622 706 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 KIF2CQ99661 725 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 SCAND2PQ9GZW5 306 aaPredicted RBP14.76□□□□□ -0.05
RIOK3-201ENST00000339486 ARGLU1Q9NWB6 273 aaPredicted RBP14.76□□□□□ -0.05
RIOK3-201ENST00000339486 TRMT1Q9NXH9 659 aaKnown RBP14.76□□□□□ -0.05
RIOK3-201ENST00000339486 A0A0G2JS52 829 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 HIP1O00291 1037 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 SYT1P21579 422 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 ME1P48163 572 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 ZNF165P49910 485 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 CGNQ9P2M7 1197 aaKnown RBP14.76□□□□□ -0.05
RIOK3-201ENST00000339486 CPA1P15085 419 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 PTPN14Q15678 1187 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 TCEANC2Q96MN5 208 aa14.76□□□□□ -0.05
RIOK3-201ENST00000339486 NSFL1CQ9UNZ2 370 aaKnown RBP14.76□□□□□ -0.05
RIOK3-201ENST00000339486 IBTKQ9P2D0 1353 aaPredicted RBP14.75□□□□□ -0.05
RIOK3-201ENST00000339486 AK2P54819 239 aa14.75□□□□□ -0.05
RIOK3-201ENST00000339486 TAF7Q15545 349 aaPredicted RBP14.75□□□□□ -0.05
RIOK3-201ENST00000339486 DNAJC2Q99543 621 aaKnown RBP14.75□□□□□ -0.05
RIOK3-201ENST00000339486 RIC3Q7Z5B4 369 aa14.75□□□□□ -0.05
RIOK3-201ENST00000339486 ERC1Q8IUD2 1116 aa14.75□□□□□ -0.05
RIOK3-201ENST00000339486 CREBRFQ8IUR6 639 aa14.75□□□□□ -0.05
RIOK3-201ENST00000339486 PALD1Q9ULE6 856 aa14.75□□□□□ -0.05
RIOK3-201ENST00000339486 PTGS1P23219 599 aa14.74□□□□□ -0.05
RIOK3-201ENST00000339486 ATP8B2P98198 1209 aa14.74□□□□□ -0.05
RIOK3-201ENST00000339486 FAM200AQ8TCP9 573 aa14.74□□□□□ -0.05
RIOK3-201ENST00000339486 RHPN1Q8TCX5 695 aa14.74□□□□□ -0.05
RIOK3-201ENST00000339486 SYNE3Q6ZMZ3 975 aa14.74□□□□□ -0.05
RIOK3-201ENST00000339486 NEUROD6Q96NK8 337 aa14.74□□□□□ -0.05
RIOK3-201ENST00000339486 GNAT3A8MTJ3 354 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms