RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP1-201ENST00000339269 TRPM3Q9HCF6 1732 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP1-201ENST00000339269 RGPD2P0DJD1 1756 aa16.23■□□□□ 0.19
CDK5RAP1-201ENST00000339269 RPAP2Q8IXW5 612 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP1-201ENST00000339269 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
CDK5RAP1-201ENST00000339269 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP1-201ENST00000339269 OTUD7AQ8TE49 926 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP1-201ENST00000339269 KIF2CQ99661 725 aa16.22■□□□□ 0.19
CDK5RAP1-201ENST00000339269 BABAM1Q9NWV8 329 aa16.21■□□□□ 0.19
CDK5RAP1-201ENST00000339269 NPHP3Q7Z494 1330 aa16.21■□□□□ 0.19
CDK5RAP1-201ENST00000339269 XPCQ01831 940 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP1-201ENST00000339269 PSME1Q06323 249 aa16.2■□□□□ 0.18
CDK5RAP1-201ENST00000339269 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP1-201ENST00000339269 FLIIQ13045 1269 aa16.2■□□□□ 0.18
CDK5RAP1-201ENST00000339269 ARHGEF25Q86VW2 580 aa16.2■□□□□ 0.18
CDK5RAP1-201ENST00000339269 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP1-201ENST00000339269 SLKQ9H2G2 1235 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP1-201ENST00000339269 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP1-201ENST00000339269 LMO7Q8WWI1 1683 aa16.19■□□□□ 0.18
CDK5RAP1-201ENST00000339269 CAMTA1Q9Y6Y1 1673 aa16.19■□□□□ 0.18
CDK5RAP1-201ENST00000339269 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP1-201ENST00000339269 PXDNQ92626 1479 aa16.19■□□□□ 0.18
CDK5RAP1-201ENST00000339269 CCT4P50991 539 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP1-201ENST00000339269 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
CDK5RAP1-201ENST00000339269 LGR6Q9HBX8 967 aa16.18■□□□□ 0.18
CDK5RAP1-201ENST00000339269 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
CDK5RAP1-201ENST00000339269 SMARCA5O60264 1052 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP1-201ENST00000339269 TTC22Q5TAA0 569 aa16.18■□□□□ 0.18
CDK5RAP1-201ENST00000339269 SOS2Q07890 1332 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP1-201ENST00000339269 GCP02774 474 aa16.17■□□□□ 0.18
CDK5RAP1-201ENST00000339269 CCDC30Q5VVM6 783 aa16.17■□□□□ 0.18
CDK5RAP1-201ENST00000339269 SLC4A10Q6U841 1118 aa16.17■□□□□ 0.18
CDK5RAP1-201ENST00000339269 NECTIN2Q92692 538 aa16.17■□□□□ 0.18
CDK5RAP1-201ENST00000339269 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
CDK5RAP1-201ENST00000339269 JCADQ9P266 1359 aa16.16■□□□□ 0.18
CDK5RAP1-201ENST00000339269 DDIT3P35638 169 aa16.16■□□□□ 0.18
CDK5RAP1-201ENST00000339269 KRT28Q7Z3Y7 464 aa16.16■□□□□ 0.18
CDK5RAP1-201ENST00000339269 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
CDK5RAP1-201ENST00000339269 KCNQ3O43525 872 aa16.15■□□□□ 0.18
CDK5RAP1-201ENST00000339269 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP1-201ENST00000339269 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP1-201ENST00000339269 SNX21Q969T3 373 aa16.15■□□□□ 0.18
CDK5RAP1-201ENST00000339269 CDC45O75419 566 aa16.14■□□□□ 0.17
CDK5RAP1-201ENST00000339269 AXIN2Q9Y2T1 843 aa16.14■□□□□ 0.17
CDK5RAP1-201ENST00000339269 SALL3Q9BXA9 1300 aa16.14■□□□□ 0.17
CDK5RAP1-201ENST00000339269 ALS2Q96Q42 1657 aa16.14■□□□□ 0.17
CDK5RAP1-201ENST00000339269 CACNA1FO60840 1977 aa16.14■□□□□ 0.17
CDK5RAP1-201ENST00000339269 CD2BP2O95400 341 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP1-201ENST00000339269 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP1-201ENST00000339269 GNAI2P04899 355 aa16.12■□□□□ 0.17
CDK5RAP1-201ENST00000339269 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP1-201ENST00000339269 PNMA6EA0A0J9YXQ4 647 aa16.12■□□□□ 0.17
CDK5RAP1-201ENST00000339269 ZBTB7CA1YPR0 619 aa16.12■□□□□ 0.17
CDK5RAP1-201ENST00000339269 AKAP4Q5JQC9 854 aa16.12■□□□□ 0.17
CDK5RAP1-201ENST00000339269 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
CDK5RAP1-201ENST00000339269 SPRYD3Q8NCJ5 442 aa16.12■□□□□ 0.17
CDK5RAP1-201ENST00000339269 USP44Q9H0E7 712 aa16.12■□□□□ 0.17
CDK5RAP1-201ENST00000339269 SDSP20132 328 aa16.11■□□□□ 0.17
CDK5RAP1-201ENST00000339269 GSE1Q14687 1217 aa16.11■□□□□ 0.17
CDK5RAP1-201ENST00000339269 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP1-201ENST00000339269 ANKRD24Q8TF21 1146 aa16.11■□□□□ 0.17
CDK5RAP1-201ENST00000339269 ADAMTS7Q9UKP4 1686 aa16.11■□□□□ 0.17
CDK5RAP1-201ENST00000339269 OVOS2A0A0G2JMS6 1433 aa16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 APBB1O00213 710 aa16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 TNS3Q68CZ2 1445 aa16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 HEG1Q9ULI3 1381 aa16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 COL22A1Q8NFW1 1626 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 HOXB7P09629 217 aa16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
CDK5RAP1-201ENST00000339269 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
CDK5RAP1-201ENST00000339269 RNMTO43148 476 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP1-201ENST00000339269 HMMRO75330 724 aa16.09■□□□□ 0.17
CDK5RAP1-201ENST00000339269 ATP8B2P98198 1209 aa16.09■□□□□ 0.17
CDK5RAP1-201ENST00000339269 MPRIPQ6WCQ1 1025 aa16.09■□□□□ 0.17
CDK5RAP1-201ENST00000339269 EXOC6BQ9Y2D4 811 aa16.09■□□□□ 0.17
CDK5RAP1-201ENST00000339269 IBTKQ9P2D0 1353 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP1-201ENST00000339269 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.17
CDK5RAP1-201ENST00000339269 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.17
CDK5RAP1-201ENST00000339269 GNAI3P08754 354 aa16.08■□□□□ 0.17
CDK5RAP1-201ENST00000339269 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.17
CDK5RAP1-201ENST00000339269 NUTM2AQ8IVF1 878 aaPredicted RBP16.08■□□□□ 0.17
CDK5RAP1-201ENST00000339269 HSCBQ8IWL3 235 aa16.08■□□□□ 0.17
CDK5RAP1-201ENST00000339269 LRRFIP2Q9Y608 721 aaKnown RBP16.08■□□□□ 0.17
CDK5RAP1-201ENST00000339269 SIPA1L3O60292 1781 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP1-201ENST00000339269 SPATA31A6Q5VVP1 1343 aa16.08■□□□□ 0.16
CDK5RAP1-201ENST00000339269 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
CDK5RAP1-201ENST00000339269 CHPF2Q9P2E5 772 aa16.08■□□□□ 0.16
CDK5RAP1-201ENST00000339269 RGPD5Q99666 1765 aa16.07■□□□□ 0.16
CDK5RAP1-201ENST00000339269 PDE1AP54750 535 aa16.07■□□□□ 0.16
CDK5RAP1-201ENST00000339269 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
CDK5RAP1-201ENST00000339269 ADCY9O60503 1353 aa16.07■□□□□ 0.16
CDK5RAP1-201ENST00000339269 LRP6O75581 1613 aa16.06■□□□□ 0.16
CDK5RAP1-201ENST00000339269 ERBB3P21860 1342 aa16.06■□□□□ 0.16
CDK5RAP1-201ENST00000339269 AMOTQ4VCS5 1084 aa16.06■□□□□ 0.16
CDK5RAP1-201ENST00000339269 CHMP5Q9NZZ3 219 aa16.06■□□□□ 0.16
CDK5RAP1-201ENST00000339269 ABCA3Q99758 1704 aa16.06■□□□□ 0.16
CDK5RAP1-201ENST00000339269 COL18A1P39060 1754 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms