RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TSPYL4Q9UJ04 414 aa18.82■□□□□ 0.6
NIPAL3-202ENST00000339255 DOT1LQ8TEK3 1739 aa18.82■□□□□ 0.6
NIPAL3-202ENST00000339255 A0A0G2JS52 829 aa18.8■□□□□ 0.6
NIPAL3-202ENST00000339255 MYT1Q01538 1121 aa18.8■□□□□ 0.6
NIPAL3-202ENST00000339255 PAPPAQ13219 1627 aa18.8■□□□□ 0.6
NIPAL3-202ENST00000339255 CABP4P57796 275 aa18.79■□□□□ 0.6
NIPAL3-202ENST00000339255 ZNF428Q96B54 188 aa18.79■□□□□ 0.6
NIPAL3-202ENST00000339255 RCAN3Q9UKA8 241 aa18.79■□□□□ 0.6
NIPAL3-202ENST00000339255 SOS1Q07889 1333 aaPredicted RBP18.79■□□□□ 0.6
NIPAL3-202ENST00000339255 BTBD11A6QL63 1104 aa18.79■□□□□ 0.6
NIPAL3-202ENST00000339255 EXOSC9Q06265 439 aaKnown RBP18.79■□□□□ 0.6
NIPAL3-202ENST00000339255 RBM6P78332 1123 aaKnown RBP18.78■□□□□ 0.6
NIPAL3-202ENST00000339255 CACNA1FO60840 1977 aa18.78■□□□□ 0.6
NIPAL3-202ENST00000339255 UBR2Q8IWV8 1755 aa18.78■□□□□ 0.6
NIPAL3-202ENST00000339255 BCL9O00512 1426 aa18.76■□□□□ 0.59
NIPAL3-202ENST00000339255 MARCH10Q8NA82 808 aaPredicted RBP18.76■□□□□ 0.59
NIPAL3-202ENST00000339255 NFATC2IPQ8NCF5 419 aa18.76■□□□□ 0.59
NIPAL3-202ENST00000339255 BRWD3Q6RI45 1802 aa18.76■□□□□ 0.59
NIPAL3-202ENST00000339255 MIS18AQ9NYP9 233 aa18.76■□□□□ 0.59
NIPAL3-202ENST00000339255 TMOD3Q9NYL9 352 aa18.75■□□□□ 0.59
NIPAL3-202ENST00000339255 TWISTNBQ3B726 338 aaPredicted RBP18.74■□□□□ 0.59
NIPAL3-202ENST00000339255 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
NIPAL3-202ENST00000339255 CHMP4AQ9BY43 222 aa18.74■□□□□ 0.59
NIPAL3-202ENST00000339255 ZNF790Q6PG37 636 aa18.73■□□□□ 0.59
NIPAL3-202ENST00000339255 NHSQ6T4R5 1651 aa18.73■□□□□ 0.59
NIPAL3-202ENST00000339255 HOXB7P09629 217 aa18.73■□□□□ 0.59
NIPAL3-202ENST00000339255 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
NIPAL3-202ENST00000339255 SBF2Q86WG5 1849 aa18.72■□□□□ 0.59
NIPAL3-202ENST00000339255 EIF4A1P60842 406 aaKnown RBP18.72■□□□□ 0.59
NIPAL3-202ENST00000339255 C8orf58Q8NAV2 365 aa18.72■□□□□ 0.59
NIPAL3-202ENST00000339255 RXRBP28702 533 aa18.71■□□□□ 0.59
NIPAL3-202ENST00000339255 ALDH1L2Q3SY69 923 aa18.71■□□□□ 0.59
NIPAL3-202ENST00000339255 LAMB4A4D0S4 1761 aa18.71■□□□□ 0.58
NIPAL3-202ENST00000339255 HEG1Q9ULI3 1381 aa18.7■□□□□ 0.58
NIPAL3-202ENST00000339255 VAMP4O75379 141 aa18.7■□□□□ 0.58
NIPAL3-202ENST00000339255 RARSP54136 660 aaKnown RBP18.7■□□□□ 0.58
NIPAL3-202ENST00000339255 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
NIPAL3-202ENST00000339255 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
NIPAL3-202ENST00000339255 SUPT16HQ9Y5B9 1047 aaKnown RBP18.69■□□□□ 0.58
NIPAL3-202ENST00000339255 FMNL2Q96PY5 1086 aa18.69■□□□□ 0.58
NIPAL3-202ENST00000339255 RGS17Q9UGC6 210 aaPredicted RBP18.69■□□□□ 0.58
NIPAL3-202ENST00000339255 KCPQ6ZWJ8 1503 aa18.68■□□□□ 0.58
NIPAL3-202ENST00000339255 C5P01031 1676 aa18.68■□□□□ 0.58
NIPAL3-202ENST00000339255 PRIM1P49642 420 aaKnown RBP18.68■□□□□ 0.58
NIPAL3-202ENST00000339255 PIGBQ92521 554 aa18.68■□□□□ 0.58
NIPAL3-202ENST00000339255 ELL2O00472 640 aaPredicted RBP18.67■□□□□ 0.58
NIPAL3-202ENST00000339255 KRT24Q2M2I5 525 aa18.67■□□□□ 0.58
NIPAL3-202ENST00000339255 ILDR1Q86SU0 546 aaPredicted RBP18.67■□□□□ 0.58
NIPAL3-202ENST00000339255 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.67■□□□□ 0.58
NIPAL3-202ENST00000339255 SYTL4Q96C24 671 aaPredicted RBP18.67■□□□□ 0.58
NIPAL3-202ENST00000339255 BTAF1O14981 1849 aa18.67■□□□□ 0.58
NIPAL3-202ENST00000339255 KCNQ3O43525 872 aa18.66■□□□□ 0.58
NIPAL3-202ENST00000339255 SLC39A6Q13433 755 aa18.66■□□□□ 0.58
NIPAL3-202ENST00000339255 KRT27Q7Z3Y8 459 aa18.66■□□□□ 0.58
NIPAL3-202ENST00000339255 SMC4Q9NTJ3 1288 aa18.66■□□□□ 0.58
NIPAL3-202ENST00000339255 KIF16BQ96L93 1317 aa18.66■□□□□ 0.58
NIPAL3-202ENST00000339255 GIGYF1O75420 1035 aaPredicted RBP18.66■□□□□ 0.58
NIPAL3-202ENST00000339255 BRPF1P55201 1214 aaPredicted RBP18.66■□□□□ 0.58
NIPAL3-202ENST00000339255 ZNF496Q96IT1 587 aaPredicted RBP18.66■□□□□ 0.58
NIPAL3-202ENST00000339255 CICQ96RK0 1608 aaPredicted RBP18.65■□□□□ 0.58
NIPAL3-202ENST00000339255 ZNF831Q5JPB2 1677 aa18.65■□□□□ 0.58
NIPAL3-202ENST00000339255 RRP1P56182 461 aaKnown RBP18.65■□□□□ 0.58
NIPAL3-202ENST00000339255 CCDC30Q5VVM6 783 aa18.65■□□□□ 0.58
NIPAL3-202ENST00000339255 SSH1Q8WYL5 1049 aa18.65■□□□□ 0.58
NIPAL3-202ENST00000339255 RGS12O14924 1447 aa18.65■□□□□ 0.58
NIPAL3-202ENST00000339255 NEFLP07196 543 aa18.64■□□□□ 0.57
NIPAL3-202ENST00000339255 SNRPA1P09661 255 aaKnown RBP18.64■□□□□ 0.57
NIPAL3-202ENST00000339255 POTEAQ6S8J7 498 aa18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 FAM196AQ6ZSG2 479 aa18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 STK31Q9BXU1 1019 aa18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 BCAR3O75815 825 aa18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 HDGFL1Q5TGJ6 251 aa18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 VSIG10Q8N0Z9 540 aa18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 ACSBG1Q96GR2 724 aa18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 ATG3Q9NT62 314 aa18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
NIPAL3-202ENST00000339255 BCL2L13Q9BXK5 485 aa18.61■□□□□ 0.57
NIPAL3-202ENST00000339255 IPO8O15397 1037 aaKnown RBP18.6■□□□□ 0.57
NIPAL3-202ENST00000339255 CANXP27824 592 aaKnown RBP18.6■□□□□ 0.57
NIPAL3-202ENST00000339255 PTCD1O75127 700 aaKnown RBP18.6■□□□□ 0.57
NIPAL3-202ENST00000339255 TEX13AQ9BXU3 409 aaPredicted RBP18.6■□□□□ 0.57
NIPAL3-202ENST00000339255 TJP1Q07157 1748 aa18.59■□□□□ 0.57
NIPAL3-202ENST00000339255 KCNQ2O43526 872 aa18.59■□□□□ 0.57
NIPAL3-202ENST00000339255 MRPL50Q8N5N7 158 aaKnown RBP18.59■□□□□ 0.57
NIPAL3-202ENST00000339255 PALLDQ8WX93 1383 aa18.58■□□□□ 0.57
NIPAL3-202ENST00000339255 LY75O60449 1722 aa18.58■□□□□ 0.57
NIPAL3-202ENST00000339255 ERBB4Q15303 1308 aa18.58■□□□□ 0.57
NIPAL3-202ENST00000339255 MS4A1P11836 297 aa18.58■□□□□ 0.57
NIPAL3-202ENST00000339255 FAM182BQ5T319 152 aa18.58■□□□□ 0.57
NIPAL3-202ENST00000339255 ARHGAP45Q92619 1136 aa18.58■□□□□ 0.57
NIPAL3-202ENST00000339255 DBF4Q9UBU7 674 aaPredicted RBP18.58■□□□□ 0.57
NIPAL3-202ENST00000339255 BCL11BQ9C0K0 894 aaPredicted RBP18.57■□□□□ 0.56
NIPAL3-202ENST00000339255 PTPRCP08575 1304 aa18.57■□□□□ 0.56
NIPAL3-202ENST00000339255 EIF2S2P20042 333 aaKnown RBP18.57■□□□□ 0.56
NIPAL3-202ENST00000339255 ZKSCAN2Q63HK3 967 aa18.57■□□□□ 0.56
NIPAL3-202ENST00000339255 FRAT1Q92837 279 aaPredicted RBP18.57■□□□□ 0.56
NIPAL3-202ENST00000339255 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
NIPAL3-202ENST00000339255 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
NIPAL3-202ENST00000339255 EP400Q96L91 3159 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms