RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 DDRGK1Q96HY6 314 aa20.41■□□□□ 0.86
SCNN1A-202ENST00000338748 CRYBG1Q9Y4K1 1723 aa20.41■□□□□ 0.86
SCNN1A-202ENST00000338748 EIF4A1P60842 406 aaKnown RBP20.4■□□□□ 0.86
SCNN1A-202ENST00000338748 AMOTQ4VCS5 1084 aa20.4■□□□□ 0.86
SCNN1A-202ENST00000338748 CEP85Q6P2H3 762 aa20.4■□□□□ 0.86
SCNN1A-202ENST00000338748 BRINP3Q76B58 766 aa20.4■□□□□ 0.86
SCNN1A-202ENST00000338748 FKBP5Q13451 457 aaPredicted RBP20.39■□□□□ 0.86
SCNN1A-202ENST00000338748 CHRNA2Q15822 529 aa20.39■□□□□ 0.86
SCNN1A-202ENST00000338748 SPATA31A3Q5VYP0 1347 aa20.39■□□□□ 0.85
SCNN1A-202ENST00000338748 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
SCNN1A-202ENST00000338748 ANKRD44Q8N8A2 993 aa20.39■□□□□ 0.85
SCNN1A-202ENST00000338748 RNMTO43148 476 aaKnown RBP20.38■□□□□ 0.85
SCNN1A-202ENST00000338748 TEFQ10587 303 aa20.38■□□□□ 0.85
SCNN1A-202ENST00000338748 C1orf141Q5JVX7 400 aa20.38■□□□□ 0.85
SCNN1A-202ENST00000338748 CACNA1FO60840 1977 aa20.37■□□□□ 0.85
SCNN1A-202ENST00000338748 PHAXQ9H814 394 aaKnown RBP20.37■□□□□ 0.85
SCNN1A-202ENST00000338748 BTBD11A6QL63 1104 aa20.37■□□□□ 0.85
SCNN1A-202ENST00000338748 NLRP2Q9NX02 1062 aa20.37■□□□□ 0.85
SCNN1A-202ENST00000338748 SOS1Q07889 1333 aaPredicted RBP20.36■□□□□ 0.85
SCNN1A-202ENST00000338748 MEGF6O75095 1541 aa20.36■□□□□ 0.85
SCNN1A-202ENST00000338748 CCT4P50991 539 aaKnown RBP20.36■□□□□ 0.85
SCNN1A-202ENST00000338748 DCTPP1Q9H773 170 aa20.36■□□□□ 0.85
SCNN1A-202ENST00000338748 EIF2S2P20042 333 aaKnown RBP20.35■□□□□ 0.85
SCNN1A-202ENST00000338748 NBR1Q14596 966 aa20.34■□□□□ 0.85
SCNN1A-202ENST00000338748 TBC1D32Q96NH3 1257 aa20.34■□□□□ 0.85
SCNN1A-202ENST00000338748 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
SCNN1A-202ENST00000338748 RPAP2Q8IXW5 612 aaPredicted RBP20.34■□□□□ 0.85
SCNN1A-202ENST00000338748 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
SCNN1A-202ENST00000338748 ADAMTS7Q9UKP4 1686 aa20.34■□□□□ 0.85
SCNN1A-202ENST00000338748 OVOS2A0A0G2JMS6 1433 aa20.33■□□□□ 0.85
SCNN1A-202ENST00000338748 CHPF2Q9P2E5 772 aa20.33■□□□□ 0.85
SCNN1A-202ENST00000338748 ANXA1P04083 346 aa20.33■□□□□ 0.84
SCNN1A-202ENST00000338748 N4BP2Q86UW6 1770 aaPredicted RBP20.32■□□□□ 0.84
SCNN1A-202ENST00000338748 PRAMEF22A3QJZ6 481 aa20.31■□□□□ 0.84
SCNN1A-202ENST00000338748 RAPGEF4Q8WZA2 1011 aa20.31■□□□□ 0.84
SCNN1A-202ENST00000338748 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
SCNN1A-202ENST00000338748 MFAP1P55081 439 aaKnown RBP20.31■□□□□ 0.84
SCNN1A-202ENST00000338748 BMP2KLQ5H9B9 411 aa20.31■□□□□ 0.84
SCNN1A-202ENST00000338748 CSB-PGBD3P0DP91 1061 aa20.3■□□□□ 0.84
SCNN1A-202ENST00000338748 C16orf71Q8IYS4 520 aaPredicted RBP20.3■□□□□ 0.84
SCNN1A-202ENST00000338748 OTUD7AQ8TE49 926 aaPredicted RBP20.3■□□□□ 0.84
SCNN1A-202ENST00000338748 APBB1O00213 710 aa20.3■□□□□ 0.84
SCNN1A-202ENST00000338748 SLAIN2Q9P270 581 aa20.3■□□□□ 0.84
SCNN1A-202ENST00000338748 CPDO75976 1380 aa20.29■□□□□ 0.84
SCNN1A-202ENST00000338748 SMARCA5O60264 1052 aaPredicted RBP20.29■□□□□ 0.84
SCNN1A-202ENST00000338748 HOXB7P09629 217 aa20.29■□□□□ 0.84
SCNN1A-202ENST00000338748 UPF2Q9HAU5 1272 aaKnown RBP20.29■□□□□ 0.84
SCNN1A-202ENST00000338748 PXDNLA1KZ92 1463 aa20.29■□□□□ 0.84
SCNN1A-202ENST00000338748 HEG1Q9ULI3 1381 aa20.28■□□□□ 0.84
SCNN1A-202ENST00000338748 PLEKHM2Q8IWE5 1019 aa20.28■□□□□ 0.84
SCNN1A-202ENST00000338748 ABCC6O95255 1503 aa20.28■□□□□ 0.84
SCNN1A-202ENST00000338748 GNAI2P04899 355 aa20.27■□□□□ 0.84
SCNN1A-202ENST00000338748 GSPT1P15170 499 aaKnown RBP20.27■□□□□ 0.84
SCNN1A-202ENST00000338748 SOS2Q07890 1332 aaPredicted RBP20.27■□□□□ 0.84
SCNN1A-202ENST00000338748 GIGYF1O75420 1035 aaPredicted RBP20.27■□□□□ 0.84
SCNN1A-202ENST00000338748 PHKG2P15735 406 aa20.27■□□□□ 0.84
SCNN1A-202ENST00000338748 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
SCNN1A-202ENST00000338748 PROSER3Q2NL68 480 aa20.27■□□□□ 0.84
SCNN1A-202ENST00000338748 SCN11AQ9UI33 1791 aa20.27■□□□□ 0.84
SCNN1A-202ENST00000338748 USP44Q9H0E7 712 aa20.26■□□□□ 0.83
SCNN1A-202ENST00000338748 PNMA6EA0A0J9YXQ4 647 aa20.26■□□□□ 0.83
SCNN1A-202ENST00000338748 SLC39A6Q13433 755 aa20.25■□□□□ 0.83
SCNN1A-202ENST00000338748 CYP27B1O15528 508 aa20.25■□□□□ 0.83
SCNN1A-202ENST00000338748 C22orf23Q9BZE7 217 aa20.25■□□□□ 0.83
SCNN1A-202ENST00000338748 DAXXQ9UER7 740 aaPredicted RBP20.25■□□□□ 0.83
SCNN1A-202ENST00000338748 LRRFIP2Q9Y608 721 aaKnown RBP20.25■□□□□ 0.83
SCNN1A-202ENST00000338748 PI4KAP2A4QPH2 592 aa20.24■□□□□ 0.83
SCNN1A-202ENST00000338748 PI4KAP1Q8N8J0 262 aa20.24■□□□□ 0.83
SCNN1A-202ENST00000338748 ADCY9O60503 1353 aa20.24■□□□□ 0.83
SCNN1A-202ENST00000338748 GNAI3P08754 354 aa20.23■□□□□ 0.83
SCNN1A-202ENST00000338748 PKD1L3Q7Z443 1732 aa20.23■□□□□ 0.83
SCNN1A-202ENST00000338748 SLC52A2Q9HAB3 445 aa20.23■□□□□ 0.83
SCNN1A-202ENST00000338748 EXOC6BQ9Y2D4 811 aa20.23■□□□□ 0.83
SCNN1A-202ENST00000338748 HMMRO75330 724 aa20.22■□□□□ 0.83
SCNN1A-202ENST00000338748 TBC1D9Q6ZT07 1266 aa20.22■□□□□ 0.83
SCNN1A-202ENST00000338748 PRDM11Q9NQV5 511 aa20.22■□□□□ 0.83
SCNN1A-202ENST00000338748 SPG7Q9UQ90 795 aa20.22■□□□□ 0.83
SCNN1A-202ENST00000338748 ABCA3Q99758 1704 aa20.22■□□□□ 0.83
SCNN1A-202ENST00000338748 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
SCNN1A-202ENST00000338748 C5P01031 1676 aa20.21■□□□□ 0.83
SCNN1A-202ENST00000338748 DNAAF4Q8WXU2 420 aa20.21■□□□□ 0.83
SCNN1A-202ENST00000338748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.21■□□□□ 0.83
SCNN1A-202ENST00000338748 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
SCNN1A-202ENST00000338748 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
SCNN1A-202ENST00000338748 ZNF790Q6PG37 636 aa20.21■□□□□ 0.83
SCNN1A-202ENST00000338748 IFNL2Q8IZJ0 200 aa20.21■□□□□ 0.83
SCNN1A-202ENST00000338748 SRCIN1Q9C0H9 1055 aa20.21■□□□□ 0.83
SCNN1A-202ENST00000338748 UBTFL1P0CB47 393 aaPredicted RBP20.2■□□□□ 0.82
SCNN1A-202ENST00000338748 TTC22Q5TAA0 569 aa20.2■□□□□ 0.82
SCNN1A-202ENST00000338748 NBPF7P0C2Y1 421 aaPredicted RBP20.19■□□□□ 0.82
SCNN1A-202ENST00000338748 COL5A2P05997 1499 aaPredicted RBP20.19■□□□□ 0.82
SCNN1A-202ENST00000338748 ATP8B2P98198 1209 aa20.19■□□□□ 0.82
SCNN1A-202ENST00000338748 MRC1P22897 1456 aa20.18■□□□□ 0.82
SCNN1A-202ENST00000338748 TBC1D2Q9BYX2 928 aa20.18■□□□□ 0.82
SCNN1A-202ENST00000338748 WDR17Q8IZU2 1322 aa20.18■□□□□ 0.82
SCNN1A-202ENST00000338748 PDIA6Q15084 440 aa20.17■□□□□ 0.82
SCNN1A-202ENST00000338748 NHSL1Q5SYE7 1610 aa20.17■□□□□ 0.82
SCNN1A-202ENST00000338748 ZNF496Q96IT1 587 aaPredicted RBP20.17■□□□□ 0.82
SCNN1A-202ENST00000338748 DCAF5Q96JK2 942 aa20.16■□□□□ 0.82
SCNN1A-202ENST00000338748 MAP3K2Q9Y2U5 619 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms