RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 EZH2Q15910 746 aaKnown RBP20.2■□□□□ 0.82
SEC13-201ENST00000337354 MCM10Q7L590 875 aa20.2■□□□□ 0.82
SEC13-201ENST00000337354 PTF1AQ7RTS3 328 aa20.2■□□□□ 0.82
SEC13-201ENST00000337354 CCDC27Q2M243 656 aa20.19■□□□□ 0.82
SEC13-201ENST00000337354 DCTN1Q14203 1278 aa20.18■□□□□ 0.82
SEC13-201ENST00000337354 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
SEC13-201ENST00000337354 TRIM35Q9UPQ4 493 aa20.18■□□□□ 0.82
SEC13-201ENST00000337354 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
SEC13-201ENST00000337354 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
SEC13-201ENST00000337354 CAMKK2Q96RR4 588 aa20.16■□□□□ 0.82
SEC13-201ENST00000337354 CALD1Q05682 793 aaKnown RBP20.15■□□□□ 0.82
SEC13-201ENST00000337354 ITGB4P16144 1822 aa20.15■□□□□ 0.82
SEC13-201ENST00000337354 HMGB2P26583 209 aaKnown RBP20.14■□□□□ 0.81
SEC13-201ENST00000337354 BTBD11A6QL63 1104 aa20.13■□□□□ 0.81
SEC13-201ENST00000337354 ATG3Q9NT62 314 aa20.13■□□□□ 0.81
SEC13-201ENST00000337354 BABAM1Q9NWV8 329 aa20.13■□□□□ 0.81
SEC13-201ENST00000337354 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
SEC13-201ENST00000337354 ASAP1Q9ULH1 1129 aa20.12■□□□□ 0.81
SEC13-201ENST00000337354 MRC1P22897 1456 aa20.12■□□□□ 0.81
SEC13-201ENST00000337354 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
SEC13-201ENST00000337354 ADAMTS7Q9UKP4 1686 aa20.11■□□□□ 0.81
SEC13-201ENST00000337354 SLC27A3Q5K4L6 730 aa20.1■□□□□ 0.81
SEC13-201ENST00000337354 PALLDQ8WX93 1383 aa20.09■□□□□ 0.81
SEC13-201ENST00000337354 PSDA5PKW4 1024 aaPredicted RBP20.09■□□□□ 0.81
SEC13-201ENST00000337354 ZNF790Q6PG37 636 aa20.09■□□□□ 0.81
SEC13-201ENST00000337354 TTC5Q8N0Z6 440 aa20.09■□□□□ 0.81
SEC13-201ENST00000337354 LY75O60449 1722 aa20.09■□□□□ 0.81
SEC13-201ENST00000337354 TXNRD1Q16881 649 aa20.08■□□□□ 0.81
SEC13-201ENST00000337354 WDR63Q8IWG1 891 aa20.08■□□□□ 0.81
SEC13-201ENST00000337354 VIRMAQ69YN4 1812 aaKnown RBP20.08■□□□□ 0.81
SEC13-201ENST00000337354 PROM2Q8N271 834 aa20.08■□□□□ 0.8
SEC13-201ENST00000337354 CFAP44Q96MT7 982 aa20.08■□□□□ 0.8
SEC13-201ENST00000337354 SALL2Q9Y467 1007 aaPredicted RBP20.08■□□□□ 0.8
SEC13-201ENST00000337354 LOC102724428A0A0B4J2F2 783 aa20.07■□□□□ 0.8
SEC13-201ENST00000337354 CHL1O00533 1208 aa20.07■□□□□ 0.8
SEC13-201ENST00000337354 SIK1P57059 783 aa20.07■□□□□ 0.8
SEC13-201ENST00000337354 SLC39A6Q13433 755 aa20.07■□□□□ 0.8
SEC13-201ENST00000337354 R3HDM1Q15032 1099 aaKnown RBP20.07■□□□□ 0.8
SEC13-201ENST00000337354 IL16Q14005 1332 aa20.06■□□□□ 0.8
SEC13-201ENST00000337354 GNAI1P63096 354 aa20.06■□□□□ 0.8
SEC13-201ENST00000337354 NBPF14Q5TI25 921 aa20.06■□□□□ 0.8
SEC13-201ENST00000337354 VSIG10Q8N0Z9 540 aa20.06■□□□□ 0.8
SEC13-201ENST00000337354 IFT57Q9NWB7 429 aa20.06■□□□□ 0.8
SEC13-201ENST00000337354 CCNL1Q9UK58 526 aaPredicted RBP20.06■□□□□ 0.8
SEC13-201ENST00000337354 SCN11AQ9UI33 1791 aa20.05■□□□□ 0.8
SEC13-201ENST00000337354 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
SEC13-201ENST00000337354 PTCD1O75127 700 aaKnown RBP20.05■□□□□ 0.8
SEC13-201ENST00000337354 FMNL2Q96PY5 1086 aa20.05■□□□□ 0.8
SEC13-201ENST00000337354 RBM42Q9BTD8 480 aaKnown RBP20.05■□□□□ 0.8
SEC13-201ENST00000337354 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
SEC13-201ENST00000337354 TSPYL4Q9UJ04 414 aa20.05■□□□□ 0.8
SEC13-201ENST00000337354 PAPPAQ13219 1627 aa20.04■□□□□ 0.8
SEC13-201ENST00000337354 ZNF853P0CG23 659 aa20.04■□□□□ 0.8
SEC13-201ENST00000337354 ATP6V1AP38606 617 aa20.04■□□□□ 0.8
SEC13-201ENST00000337354 LAS1LQ9Y4W2 734 aaKnown RBP20.03■□□□□ 0.8
SEC13-201ENST00000337354 ZNF496Q96IT1 587 aaPredicted RBP20.02■□□□□ 0.8
SEC13-201ENST00000337354 TEX13AQ9BXU3 409 aaPredicted RBP20.02■□□□□ 0.8
SEC13-201ENST00000337354 LRRC4BQ9NT99 713 aa20.02■□□□□ 0.8
SEC13-201ENST00000337354 ZNF521Q96K83 1311 aa20.01■□□□□ 0.79
SEC13-201ENST00000337354 KCNQ3O43525 872 aa20.01■□□□□ 0.79
SEC13-201ENST00000337354 C5P01031 1676 aa20■□□□□ 0.79
SEC13-201ENST00000337354 EIF4A1P60842 406 aaKnown RBP20■□□□□ 0.79
SEC13-201ENST00000337354 HNRNPUQ00839 825 aaKnown RBP eCLIP20■□□□□ 0.79
SEC13-201ENST00000337354 SLC4A9Q96Q91 983 aa20■□□□□ 0.79
SEC13-201ENST00000337354 ANO8Q9HCE9 1232 aaPredicted RBP20■□□□□ 0.79
SEC13-201ENST00000337354 LRP5O75197 1615 aa20■□□□□ 0.79
SEC13-201ENST00000337354 SNRPA1P09661 255 aaKnown RBP19.99■□□□□ 0.79
SEC13-201ENST00000337354 TUBGCP6Q96RT7 1819 aa19.99■□□□□ 0.79
SEC13-201ENST00000337354 HEG1Q9ULI3 1381 aa19.99■□□□□ 0.79
SEC13-201ENST00000337354 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
SEC13-201ENST00000337354 GOLGA2Q08379 1002 aa19.98■□□□□ 0.79
SEC13-201ENST00000337354 MBIPQ9NS73 344 aa19.98■□□□□ 0.79
SEC13-201ENST00000337354 CASZ1Q86V15 1759 aa19.98■□□□□ 0.79
SEC13-201ENST00000337354 ITPK1Q13572 414 aa19.97■□□□□ 0.79
SEC13-201ENST00000337354 MYH16Q9H6N6 1097 aa19.97■□□□□ 0.79
SEC13-201ENST00000337354 STK32BQ9NY57 414 aa19.97■□□□□ 0.79
SEC13-201ENST00000337354 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
SEC13-201ENST00000337354 STARD3NLO95772 234 aa19.96■□□□□ 0.79
SEC13-201ENST00000337354 KCNQ4P56696 695 aa19.96■□□□□ 0.79
SEC13-201ENST00000337354 QSER1Q2KHR3 1735 aa19.96■□□□□ 0.79
SEC13-201ENST00000337354 GIGYF1O75420 1035 aaPredicted RBP19.95■□□□□ 0.79
SEC13-201ENST00000337354 RC3H1Q5TC82 1133 aaKnown RBP19.95■□□□□ 0.79
SEC13-201ENST00000337354 KCPQ6ZWJ8 1503 aa19.95■□□□□ 0.78
SEC13-201ENST00000337354 E9PSI1 815 aa19.95■□□□□ 0.78
SEC13-201ENST00000337354 DNAJC10Q8IXB1 793 aa19.95■□□□□ 0.78
SEC13-201ENST00000337354 CYP19A1P11511 503 aaPredicted RBP19.94■□□□□ 0.78
SEC13-201ENST00000337354 LINC00116Q8NCU8 138 aa19.94■□□□□ 0.78
SEC13-201ENST00000337354 CHMP4AQ9BY43 222 aa19.94■□□□□ 0.78
SEC13-201ENST00000337354 SIPA1L3O60292 1781 aaPredicted RBP19.93■□□□□ 0.78
SEC13-201ENST00000337354 HOXB7P09629 217 aa19.93■□□□□ 0.78
SEC13-201ENST00000337354 SLC15A2Q16348 729 aa19.93■□□□□ 0.78
SEC13-201ENST00000337354 AKT1S1Q96B36 256 aa19.93■□□□□ 0.78
SEC13-201ENST00000337354 SOS1Q07889 1333 aaPredicted RBP19.92■□□□□ 0.78
SEC13-201ENST00000337354 SLFN5Q08AF3 891 aa19.92■□□□□ 0.78
SEC13-201ENST00000337354 SPINK5Q9NQ38 1064 aaPredicted RBP19.92■□□□□ 0.78
SEC13-201ENST00000337354 USP16Q9Y5T5 823 aa19.92■□□□□ 0.78
SEC13-201ENST00000337354 ZBED9Q6R2W3 1325 aa19.92■□□□□ 0.78
SEC13-201ENST00000337354 CNTNAP4Q9C0A0 1308 aa19.92■□□□□ 0.78
SEC13-201ENST00000337354 TSR2Q969E8 191 aaKnown RBP19.91■□□□□ 0.78
SEC13-201ENST00000337354 AK7Q96M32 723 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms