RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 LOC102724428A0A0B4J2F2 783 aa11.15□□□□□ -0.62
PACRG-201ENST00000337019 SIK1P57059 783 aa11.15□□□□□ -0.62
PACRG-201ENST00000337019 FKBP8Q14318 412 aa11.15□□□□□ -0.62
PACRG-201ENST00000337019 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
PACRG-201ENST00000337019 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.62
PACRG-201ENST00000337019 PRKAR2BP31323 418 aa11.14□□□□□ -0.63
PACRG-201ENST00000337019 ATP6V1AP38606 617 aa11.14□□□□□ -0.63
PACRG-201ENST00000337019 FLAD1Q8NFF5 587 aa11.14□□□□□ -0.63
PACRG-201ENST00000337019 SLC16A10Q8TF71 515 aa11.14□□□□□ -0.63
PACRG-201ENST00000337019 ASAP1Q9ULH1 1129 aa11.14□□□□□ -0.63
PACRG-201ENST00000337019 POLD1P28340 1107 aa11.13□□□□□ -0.63
PACRG-201ENST00000337019 MTHFSDQ2M296 383 aaKnown RBP11.13□□□□□ -0.63
PACRG-201ENST00000337019 ATF5Q9Y2D1 282 aaPredicted RBP11.13□□□□□ -0.63
PACRG-201ENST00000337019 ITGB4P16144 1822 aa11.13□□□□□ -0.63
PACRG-201ENST00000337019 MAP3K5Q99683 1374 aa11.13□□□□□ -0.63
PACRG-201ENST00000337019 CASZ1Q86V15 1759 aa11.13□□□□□ -0.63
PACRG-201ENST00000337019 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
PACRG-201ENST00000337019 TEFQ10587 303 aa11.13□□□□□ -0.63
PACRG-201ENST00000337019 PNNQ9H307 717 aaKnown RBP11.13□□□□□ -0.63
PACRG-201ENST00000337019 ATG3Q9NT62 314 aa11.13□□□□□ -0.63
PACRG-201ENST00000337019 PNPLA7Q6ZV29 1317 aa11.12□□□□□ -0.63
PACRG-201ENST00000337019 C5P01031 1676 aa11.12□□□□□ -0.63
PACRG-201ENST00000337019 GNAT3A8MTJ3 354 aa11.12□□□□□ -0.63
PACRG-201ENST00000337019 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
PACRG-201ENST00000337019 FCHSD2O94868 740 aa11.12□□□□□ -0.63
PACRG-201ENST00000337019 NFATC2IPQ8NCF5 419 aa11.12□□□□□ -0.63
PACRG-201ENST00000337019 RTF1Q92541 710 aaKnown RBP11.12□□□□□ -0.63
PACRG-201ENST00000337019 ANP32EQ9BTT0 268 aa11.12□□□□□ -0.63
PACRG-201ENST00000337019 SLC52A2Q9HAB3 445 aa11.12□□□□□ -0.63
PACRG-201ENST00000337019 MYBBP1AQ9BQG0 1328 aaKnown RBP11.11□□□□□ -0.63
PACRG-201ENST00000337019 TTC5Q8N0Z6 440 aa11.11□□□□□ -0.63
PACRG-201ENST00000337019 PDGFDQ9GZP0 370 aaPredicted RBP11.11□□□□□ -0.63
PACRG-201ENST00000337019 RSPH6AQ9H0K4 717 aa11.11□□□□□ -0.63
PACRG-201ENST00000337019 MAPK8IP3Q9UPT6 1336 aa11.11□□□□□ -0.63
PACRG-201ENST00000337019 GNPATO15228 680 aa11.1□□□□□ -0.63
PACRG-201ENST00000337019 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
PACRG-201ENST00000337019 PHF14O94880 888 aa11.1□□□□□ -0.63
PACRG-201ENST00000337019 MRC1P22897 1456 aa11.1□□□□□ -0.63
PACRG-201ENST00000337019 SSFA2P28290 1259 aa11.09□□□□□ -0.63
PACRG-201ENST00000337019 LINC00116Q8NCU8 138 aa11.09□□□□□ -0.63
PACRG-201ENST00000337019 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
PACRG-201ENST00000337019 QSER1Q2KHR3 1735 aa11.09□□□□□ -0.63
PACRG-201ENST00000337019 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
PACRG-201ENST00000337019 LGR6Q9HBX8 967 aa11.09□□□□□ -0.63
PACRG-201ENST00000337019 RTCBQ9Y3I0 505 aaKnown RBP11.09□□□□□ -0.63
PACRG-201ENST00000337019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
PACRG-201ENST00000337019 ITPK1Q13572 414 aa11.08□□□□□ -0.64
PACRG-201ENST00000337019 WDR43Q15061 677 aaKnown RBP eCLIP11.08□□□□□ -0.64
PACRG-201ENST00000337019 ARXQ96QS3 562 aa11.08□□□□□ -0.64
PACRG-201ENST00000337019 SCN11AQ9UI33 1791 aa11.07□□□□□ -0.64
PACRG-201ENST00000337019 PTGER2P43116 358 aa11.07□□□□□ -0.64
PACRG-201ENST00000337019 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
PACRG-201ENST00000337019 COL23A1Q86Y22 540 aaPredicted RBP11.07□□□□□ -0.64
PACRG-201ENST00000337019 CNTNAP4Q9C0A0 1308 aa11.07□□□□□ -0.64
PACRG-201ENST00000337019 MSL1Q68DK7 614 aa11.06□□□□□ -0.64
PACRG-201ENST00000337019 PHACTR3Q96KR7 559 aa11.06□□□□□ -0.64
PACRG-201ENST00000337019 SRCAPQ6ZRS2 3230 aa11.06□□□□□ -0.64
PACRG-201ENST00000337019 TAF1LQ8IZX4 1826 aa11.06□□□□□ -0.64
PACRG-201ENST00000337019 TUBGCP6Q96RT7 1819 aa11.06□□□□□ -0.64
PACRG-201ENST00000337019 ADRA2BP18089 450 aa11.06□□□□□ -0.64
PACRG-201ENST00000337019 SLC39A6Q13433 755 aa11.06□□□□□ -0.64
PACRG-201ENST00000337019 RC3H1Q5TC82 1133 aaKnown RBP11.06□□□□□ -0.64
PACRG-201ENST00000337019 ZNF831Q5JPB2 1677 aa11.05□□□□□ -0.64
PACRG-201ENST00000337019 HTATSF1O43719 755 aaKnown RBP11.05□□□□□ -0.64
PACRG-201ENST00000337019 RFC4P35249 363 aa11.05□□□□□ -0.64
PACRG-201ENST00000337019 CRKLP46109 303 aaKnown RBP11.05□□□□□ -0.64
PACRG-201ENST00000337019 TRAPPC3LQ5T215 181 aa11.05□□□□□ -0.64
PACRG-201ENST00000337019 FHDC1Q9C0D6 1143 aaPredicted RBP11.05□□□□□ -0.64
PACRG-201ENST00000337019 BTBD11A6QL63 1104 aa11.04□□□□□ -0.64
PACRG-201ENST00000337019 NPM2Q86SE8 214 aaKnown RBP11.04□□□□□ -0.64
PACRG-201ENST00000337019 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
PACRG-201ENST00000337019 PRKRIP1Q9H875 184 aaPredicted RBP11.04□□□□□ -0.64
PACRG-201ENST00000337019 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
PACRG-201ENST00000337019 CEMIPQ8WUJ3 1361 aa11.04□□□□□ -0.64
PACRG-201ENST00000337019 RPS6KA4O75676 772 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 STARD3NLO95772 234 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 LMOD3Q0VAK6 560 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 NFE2L2Q16236 605 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 IL17REQ8NFR9 667 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 FMNL2Q96PY5 1086 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 SLC4A9Q96Q91 983 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 TEX13AQ9BXU3 409 aaPredicted RBP11.03□□□□□ -0.64
PACRG-201ENST00000337019 CCDC87Q9NVE4 849 aa11.03□□□□□ -0.64
PACRG-201ENST00000337019 MCM10Q7L590 875 aa11.02□□□□□ -0.64
PACRG-201ENST00000337019 DNAJC10Q8IXB1 793 aa11.02□□□□□ -0.64
PACRG-201ENST00000337019 SYT17Q9BSW7 474 aa11.02□□□□□ -0.65
PACRG-201ENST00000337019 KCPQ6ZWJ8 1503 aa11.01□□□□□ -0.65
PACRG-201ENST00000337019 CICQ96RK0 1608 aaPredicted RBP11.01□□□□□ -0.65
PACRG-201ENST00000337019 UBR3Q6ZT12 1888 aa11.01□□□□□ -0.65
PACRG-201ENST00000337019 NLGN1Q8N2Q7 840 aa11.01□□□□□ -0.65
PACRG-201ENST00000337019 PNISRQ8TF01 805 aaKnown RBP11.01□□□□□ -0.65
PACRG-201ENST00000337019 RBM19Q9Y4C8 960 aaKnown RBP11.01□□□□□ -0.65
PACRG-201ENST00000337019 HEG1Q9ULI3 1381 aa11.01□□□□□ -0.65
PACRG-201ENST00000337019 COL5A3P25940 1745 aaPredicted RBP11.01□□□□□ -0.65
PACRG-201ENST00000337019 TJP1Q07157 1748 aa11□□□□□ -0.65
PACRG-201ENST00000337019 ZPR1O75312 459 aa11□□□□□ -0.65
PACRG-201ENST00000337019 DCTN1Q14203 1278 aa11□□□□□ -0.65
PACRG-201ENST00000337019 SMIM5Q71RC9 77 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms