RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 IQCA1Q86XH1 822 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 CUL5Q93034 780 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 MSH6P52701 1360 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 FEZ1Q99689 392 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 NEFHP12036 1026 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 MAP3K12Q12852 859 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 MVPQ14764 893 aaKnown RBP14.37□□□□□ -0.11
FN1-202ENST00000336916 SRGAP3O43295 1099 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 SERPINC1P01008 464 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 MCM3P25205 808 aa14.37□□□□□ -0.11
FN1-202ENST00000336916 NUTM2BA6NNL0 878 aaPredicted RBP14.36□□□□□ -0.11
FN1-202ENST00000336916 NUTM2EB1AL46 878 aaPredicted RBP14.36□□□□□ -0.11
FN1-202ENST00000336916 NUTM2AQ8IVF1 878 aaPredicted RBP14.36□□□□□ -0.11
FN1-202ENST00000336916 SLC5A1P13866 664 aa14.36□□□□□ -0.11
FN1-202ENST00000336916 CCDC181Q5TID7 509 aa14.36□□□□□ -0.11
FN1-202ENST00000336916 AACSQ86V21 672 aa14.36□□□□□ -0.11
FN1-202ENST00000336916 ANKIB1Q9P2G1 1089 aa14.36□□□□□ -0.11
FN1-202ENST00000336916 MATR3P43243 847 aaKnown RBP eCLIP14.36□□□□□ -0.119e-7■■□□□ 13.9
FN1-202ENST00000336916 NUDT16Q96DE0 195 aaKnown RBP14.36□□□□□ -0.11
FN1-202ENST00000336916 DHX29Q7Z478 1369 aaKnown RBP14.36□□□□□ -0.11
FN1-202ENST00000336916 RALGAPBQ86X10 1494 aa14.36□□□□□ -0.11
FN1-202ENST00000336916 ZGPATQ8N5A5 531 aaKnown RBP14.36□□□□□ -0.11
FN1-202ENST00000336916 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
FN1-202ENST00000336916 ERLIN1O75477 346 aa14.36□□□□□ -0.11
FN1-202ENST00000336916 TAF7Q15545 349 aaPredicted RBP14.35□□□□□ -0.11
FN1-202ENST00000336916 CDC5LQ99459 802 aaKnown RBP14.35□□□□□ -0.11
FN1-202ENST00000336916 IFIT5Q13325 482 aaKnown RBP14.35□□□□□ -0.11
FN1-202ENST00000336916 TMEM266Q2M3C6 531 aa14.35□□□□□ -0.11
FN1-202ENST00000336916 KIF2AO00139 706 aaPredicted RBP14.35□□□□□ -0.11
FN1-202ENST00000336916 NEBLO76041 1014 aa14.35□□□□□ -0.11
FN1-202ENST00000336916 DZIP1Q86YF9 867 aaKnown RBP14.35□□□□□ -0.11
FN1-202ENST00000336916 ZNF518AQ6AHZ1 1483 aa14.35□□□□□ -0.11
FN1-202ENST00000336916 CETN1Q12798 172 aa14.35□□□□□ -0.11
FN1-202ENST00000336916 METTL24Q5JXM2 366 aa14.35□□□□□ -0.11
FN1-202ENST00000336916 STXBP4Q6ZWJ1 553 aa14.34□□□□□ -0.11
FN1-202ENST00000336916 BAG3O95817 575 aa14.34□□□□□ -0.11
FN1-202ENST00000336916 CRACR2BQ8N4Y2 399 aaPredicted RBP14.34□□□□□ -0.11
FN1-202ENST00000336916 CCDC178Q5BJE1 867 aa14.34□□□□□ -0.11
FN1-202ENST00000336916 TSG101Q99816 390 aa14.34□□□□□ -0.11
FN1-202ENST00000336916 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
FN1-202ENST00000336916 SCAF11Q99590 1463 aaKnown RBP14.34□□□□□ -0.11
FN1-202ENST00000336916 CALRP27797 417 aaKnown RBP14.34□□□□□ -0.11
FN1-202ENST00000336916 KIF5BP33176 963 aa14.34□□□□□ -0.11
FN1-202ENST00000336916 RAI14Q9P0K7 980 aa14.34□□□□□ -0.11
FN1-202ENST00000336916 MYO1BO43795 1136 aa14.33□□□□□ -0.11
FN1-202ENST00000336916 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.11
FN1-202ENST00000336916 MKNK2Q9HBH9 465 aa14.33□□□□□ -0.11
FN1-202ENST00000336916 MTMR7Q9Y216 660 aa14.33□□□□□ -0.11
FN1-202ENST00000336916 USP5P45974 858 aa14.33□□□□□ -0.12
FN1-202ENST00000336916 CHD1LQ86WJ1 897 aa14.33□□□□□ -0.12
FN1-202ENST00000336916 FOSBP53539 338 aa14.33□□□□□ -0.12
FN1-202ENST00000336916 SH2B1Q9NRF2 756 aaPredicted RBP14.33□□□□□ -0.12
FN1-202ENST00000336916 CCDC66A2RUB6 948 aa14.33□□□□□ -0.12
FN1-202ENST00000336916 PIP4K2BP78356 416 aa14.33□□□□□ -0.12
FN1-202ENST00000336916 LEKR1Q6ZMV7 388 aa14.33□□□□□ -0.12
FN1-202ENST00000336916 FERMT1Q9BQL6 677 aa14.33□□□□□ -0.12
FN1-202ENST00000336916 FAM177BA6PVY3 158 aa14.32□□□□□ -0.12
FN1-202ENST00000336916 H0YHG0 523 aa14.32□□□□□ -0.12
FN1-202ENST00000336916 EXOSC9Q06265 439 aaKnown RBP14.32□□□□□ -0.12
FN1-202ENST00000336916 NAPBQ9H115 298 aa14.32□□□□□ -0.12
FN1-202ENST00000336916 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
FN1-202ENST00000336916 SLC12A5Q9H2X9 1139 aa14.32□□□□□ -0.12
FN1-202ENST00000336916 TSHZ2Q9NRE2 1034 aa14.32□□□□□ -0.12
FN1-202ENST00000336916 B4DLN1 442 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 MRPL12P52815 198 aaKnown RBP14.31□□□□□ -0.12
FN1-202ENST00000336916 CCDC91Q7Z6B0 441 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
FN1-202ENST00000336916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.31□□□□□ -0.12
FN1-202ENST00000336916 K7ELQ4 463 aaPredicted RBP14.31□□□□□ -0.12
FN1-202ENST00000336916 CTAGE5O15320 804 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 LDHCP07864 332 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 GSTO1P78417 241 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 NUP133Q8WUM0 1156 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 ST5P78524 1137 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 ZHX3Q9H4I2 956 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 PPP1R42Q7Z4L9 355 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 TMEM87AQ8NBN3 555 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 ARID3AQ99856 593 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 LRRC27Q9C0I9 530 aa14.31□□□□□ -0.12
FN1-202ENST00000336916 SLC4A3P48751 1232 aa14.3□□□□□ -0.12
FN1-202ENST00000336916 POLR3DP05423 398 aaPredicted RBP14.3□□□□□ -0.12
FN1-202ENST00000336916 AMPD3Q01432 767 aa14.3□□□□□ -0.12
FN1-202ENST00000336916 DBF4Q9UBU7 674 aaPredicted RBP14.3□□□□□ -0.12
FN1-202ENST00000336916 CATIPQ7Z7H3 387 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 DDX12PQ92771 950 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 RAPGEF3O95398 923 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 HLA-DOAP06340 250 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 ZNF444Q8N0Y2 327 aaPredicted RBP14.29□□□□□ -0.12
FN1-202ENST00000336916 BAG4O95429 457 aaKnown RBP14.29□□□□□ -0.12
FN1-202ENST00000336916 MAP9Q49MG5 647 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 TMPOP42166 694 aaKnown RBP14.29□□□□□ -0.12
FN1-202ENST00000336916 AMER1Q5JTC6 1135 aaPredicted RBP14.29□□□□□ -0.12
FN1-202ENST00000336916 INCENPQ9NQS7 918 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 EXOC5O00471 708 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 CAVIN2O95810 425 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 BRPF1P55201 1214 aaPredicted RBP14.29□□□□□ -0.12
FN1-202ENST00000336916 PDE4BQ07343 736 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 SPATA32Q96LK8 384 aa14.29□□□□□ -0.12
FN1-202ENST00000336916 FKBP15Q5T1M5 1219 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms