RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 TPD52L1Q16890 204 aaPredicted RBP13.19□□□□□ -0.3
LRAT-201ENST00000336356 SETQ01105 290 aaPredicted RBP13.19□□□□□ -0.3
LRAT-201ENST00000336356 CGNQ9P2M7 1197 aaKnown RBP13.19□□□□□ -0.3
LRAT-201ENST00000336356 MYOM2P54296 1465 aa13.19□□□□□ -0.3
LRAT-201ENST00000336356 DIP2AQ14689 1571 aa13.19□□□□□ -0.3
LRAT-201ENST00000336356 SYCE3A1L190 88 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 PPP4R3BQ5MIZ7 849 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 APBA3O96018 575 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 CHD1LQ86WJ1 897 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 SNX21Q969T3 373 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 BAG4O95429 457 aaKnown RBP13.18□□□□□ -0.3
LRAT-201ENST00000336356 SSFA2P28290 1259 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 TSPYL4Q9UJ04 414 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
LRAT-201ENST00000336356 SBNO1A3KN83 1393 aa13.17□□□□□ -0.3
LRAT-201ENST00000336356 KIF13AQ9H1H9 1805 aa13.17□□□□□ -0.3
LRAT-201ENST00000336356 NME9Q86XW9 330 aa13.17□□□□□ -0.3
LRAT-201ENST00000336356 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
LRAT-201ENST00000336356 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
LRAT-201ENST00000336356 HSP90AB3PQ58FF7 597 aa13.17□□□□□ -0.3
LRAT-201ENST00000336356 KIF1BO60333 1816 aa13.17□□□□□ -0.3
LRAT-201ENST00000336356 NSD3Q9BZ95 1437 aa13.17□□□□□ -0.3
LRAT-201ENST00000336356 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
LRAT-201ENST00000336356 IP6K1Q92551 441 aa13.16□□□□□ -0.3
LRAT-201ENST00000336356 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
LRAT-201ENST00000336356 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
LRAT-201ENST00000336356 NEK4P51957 841 aa13.16□□□□□ -0.3
LRAT-201ENST00000336356 FCHSD2O94868 740 aa13.16□□□□□ -0.3
LRAT-201ENST00000336356 FLT4P35916 1363 aa13.16□□□□□ -0.3
LRAT-201ENST00000336356 CFAP65Q6ZU64 1925 aaKnown RBP13.16□□□□□ -0.3
LRAT-201ENST00000336356 IQGAP3Q86VI3 1631 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 MNS1Q8NEH6 495 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 CABLES1Q8TDN4 633 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 NOL7Q9UMY1 257 aaKnown RBP13.15□□□□□ -0.3
LRAT-201ENST00000336356 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.3
LRAT-201ENST00000336356 RICTORQ6R327 1708 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 FSD2A1L4K1 749 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
LRAT-201ENST00000336356 ANO2Q9NQ90 1003 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 METP08581 1390 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 PTCH1Q13635 1447 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 RFC4P35249 363 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 GORABQ5T7V8 394 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 SMC5Q8IY18 1101 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 TRIM5Q9C035 493 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.3
LRAT-201ENST00000336356 HOMER1Q86YM7 354 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 RILPL2Q969X0 211 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 TFCP2L1Q9NZI6 479 aa13.15□□□□□ -0.3
LRAT-201ENST00000336356 SPATA31A3Q5VYP0 1347 aa13.15□□□□□ -0.31
LRAT-201ENST00000336356 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 GCC2Q8IWJ2 1684 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 GNAT3A8MTJ3 354 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 GNL2Q13823 731 aaKnown RBP13.14□□□□□ -0.31
LRAT-201ENST00000336356 UVSSAQ2YD98 709 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 ZSCAN23Q3MJ62 389 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 CHMP3Q9Y3E7 222 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
LRAT-201ENST00000336356 EDC4Q6P2E9 1401 aaKnown RBP13.14□□□□□ -0.31
LRAT-201ENST00000336356 MYO3AQ8NEV4 1616 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 RIPK4P57078 832 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
LRAT-201ENST00000336356 PARD3Q8TEW0 1356 aa13.13□□□□□ -0.31
LRAT-201ENST00000336356 APPP05067 770 aa13.13□□□□□ -0.31
LRAT-201ENST00000336356 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
LRAT-201ENST00000336356 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
LRAT-201ENST00000336356 NAP1L2Q9ULW6 460 aaPredicted RBP13.13□□□□□ -0.31
LRAT-201ENST00000336356 PREX1Q8TCU6 1659 aa13.13□□□□□ -0.31
LRAT-201ENST00000336356 EXOSC9Q06265 439 aaKnown RBP13.13□□□□□ -0.31
LRAT-201ENST00000336356 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
LRAT-201ENST00000336356 LRSAM1Q6UWE0 723 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 C16orf71Q8IYS4 520 aaPredicted RBP13.12□□□□□ -0.31
LRAT-201ENST00000336356 RALGAPBQ86X10 1494 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 POLR3AO14802 1390 aaPredicted RBP13.12□□□□□ -0.31
LRAT-201ENST00000336356 MPNDQ8N594 471 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 UNC13BO14795 1591 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 INSRP06213 1382 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 RNF17Q9BXT8 1623 aaKnown RBP13.12□□□□□ -0.31
LRAT-201ENST00000336356 HMOX1P09601 288 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 SPC24Q8NBT2 197 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
LRAT-201ENST00000336356 WDHD1O75717 1129 aaPredicted RBP13.11□□□□□ -0.31
LRAT-201ENST00000336356 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
LRAT-201ENST00000336356 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
LRAT-201ENST00000336356 FMNL2Q96PY5 1086 aa13.11□□□□□ -0.31
LRAT-201ENST00000336356 SEC24BO95487 1268 aa13.11□□□□□ -0.31
LRAT-201ENST00000336356 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
LRAT-201ENST00000336356 CCDC30Q5VVM6 783 aa13.11□□□□□ -0.31
LRAT-201ENST00000336356 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
LRAT-201ENST00000336356 RIC3Q7Z5B4 369 aa13.1□□□□□ -0.31
LRAT-201ENST00000336356 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
LRAT-201ENST00000336356 MROH2AA6NES4 1674 aa13.1□□□□□ -0.31
LRAT-201ENST00000336356 BMP2KLQ5H9B9 411 aa13.1□□□□□ -0.31
LRAT-201ENST00000336356 PARP3Q9Y6F1 533 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms