RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
TMEM39B-201ENST00000336294 PLEKHG5O94827 1062 aa20.79■□□□□ 0.92
TMEM39B-201ENST00000336294 FKBP5Q13451 457 aaPredicted RBP20.79■□□□□ 0.92
TMEM39B-201ENST00000336294 CHMP4AQ9BY43 222 aa20.79■□□□□ 0.92
TMEM39B-201ENST00000336294 KDM3BQ7LBC6 1761 aa20.79■□□□□ 0.92
TMEM39B-201ENST00000336294 STRCP1A6NGW2 1772 aa20.79■□□□□ 0.92
TMEM39B-201ENST00000336294 HMMRO75330 724 aa20.78■□□□□ 0.92
TMEM39B-201ENST00000336294 LGR6Q9HBX8 967 aa20.78■□□□□ 0.92
TMEM39B-201ENST00000336294 PXDNLA1KZ92 1463 aa20.78■□□□□ 0.92
TMEM39B-201ENST00000336294 OVOS2A0A0G2JMS6 1433 aa20.78■□□□□ 0.92
TMEM39B-201ENST00000336294 HDGFL1Q5TGJ6 251 aa20.78■□□□□ 0.92
TMEM39B-201ENST00000336294 NECTIN2Q92692 538 aa20.78■□□□□ 0.92
TMEM39B-201ENST00000336294 N4BP2Q86UW6 1770 aaPredicted RBP20.77■□□□□ 0.92
TMEM39B-201ENST00000336294 HOXB7P09629 217 aa20.77■□□□□ 0.92
TMEM39B-201ENST00000336294 TEFQ10587 303 aa20.77■□□□□ 0.92
TMEM39B-201ENST00000336294 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
TMEM39B-201ENST00000336294 GNAI2P04899 355 aa20.76■□□□□ 0.91
TMEM39B-201ENST00000336294 EIF4A1P60842 406 aaKnown RBP20.76■□□□□ 0.91
TMEM39B-201ENST00000336294 GNAI3P08754 354 aa20.75■□□□□ 0.91
TMEM39B-201ENST00000336294 AXIN2Q9Y2T1 843 aa20.75■□□□□ 0.91
TMEM39B-201ENST00000336294 CADPS2Q86UW7 1296 aa20.74■□□□□ 0.91
TMEM39B-201ENST00000336294 PLEKHM2Q8IWE5 1019 aa20.74■□□□□ 0.91
TMEM39B-201ENST00000336294 PXDNQ92626 1479 aa20.74■□□□□ 0.91
TMEM39B-201ENST00000336294 LMTK3Q96Q04 1460 aa20.74■□□□□ 0.91
TMEM39B-201ENST00000336294 RNMTO43148 476 aaKnown RBP20.74■□□□□ 0.91
TMEM39B-201ENST00000336294 BTBD11A6QL63 1104 aa20.73■□□□□ 0.91
TMEM39B-201ENST00000336294 MPRIPQ6WCQ1 1025 aa20.73■□□□□ 0.91
TMEM39B-201ENST00000336294 ERBB3P21860 1342 aa20.73■□□□□ 0.91
TMEM39B-201ENST00000336294 NPHP3Q7Z494 1330 aa20.73■□□□□ 0.91
TMEM39B-201ENST00000336294 RGPD5Q99666 1765 aa20.72■□□□□ 0.91
TMEM39B-201ENST00000336294 EIF5BO60841 1220 aaKnown RBP20.71■□□□□ 0.91
TMEM39B-201ENST00000336294 RBM25P49756 843 aaKnown RBP20.71■□□□□ 0.91
TMEM39B-201ENST00000336294 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
TMEM39B-201ENST00000336294 TBC1D2Q9BYX2 928 aa20.71■□□□□ 0.91
TMEM39B-201ENST00000336294 CDC45O75419 566 aa20.71■□□□□ 0.91
TMEM39B-201ENST00000336294 NFKBIBQ15653 356 aa20.71■□□□□ 0.91
TMEM39B-201ENST00000336294 TTC22Q5TAA0 569 aa20.7■□□□□ 0.9
TMEM39B-201ENST00000336294 TBC1D9Q6ZT07 1266 aa20.7■□□□□ 0.9
TMEM39B-201ENST00000336294 TNS3Q68CZ2 1445 aa20.7■□□□□ 0.9
TMEM39B-201ENST00000336294 EIF2S2P20042 333 aaKnown RBP20.69■□□□□ 0.9
TMEM39B-201ENST00000336294 GSPT1P15170 499 aaKnown RBP20.69■□□□□ 0.9
TMEM39B-201ENST00000336294 KCNQ3O43525 872 aa20.68■□□□□ 0.9
TMEM39B-201ENST00000336294 C16orf71Q8IYS4 520 aaPredicted RBP20.68■□□□□ 0.9
TMEM39B-201ENST00000336294 PHAXQ9H814 394 aaKnown RBP20.68■□□□□ 0.9
TMEM39B-201ENST00000336294 ABCC6O95255 1503 aa20.68■□□□□ 0.9
TMEM39B-201ENST00000336294 ADAMTS7Q9UKP4 1686 aa20.68■□□□□ 0.9
TMEM39B-201ENST00000336294 DDX17Q92841 729 aaKnown RBP20.67■□□□□ 0.9
TMEM39B-201ENST00000336294 SMARCA5O60264 1052 aaPredicted RBP20.67■□□□□ 0.9
TMEM39B-201ENST00000336294 ATP8B2P98198 1209 aa20.67■□□□□ 0.9
TMEM39B-201ENST00000336294 RAPGEF4Q8WZA2 1011 aa20.67■□□□□ 0.9
TMEM39B-201ENST00000336294 CHPF2Q9P2E5 772 aa20.67■□□□□ 0.9
TMEM39B-201ENST00000336294 APBB1O00213 710 aa20.66■□□□□ 0.9
TMEM39B-201ENST00000336294 SIPA1L3O60292 1781 aaPredicted RBP20.66■□□□□ 0.9
TMEM39B-201ENST00000336294 COL18A1P39060 1754 aa20.66■□□□□ 0.9
TMEM39B-201ENST00000336294 UBTFL1P0CB47 393 aaPredicted RBP20.64■□□□□ 0.9
TMEM39B-201ENST00000336294 SRCIN1Q9C0H9 1055 aa20.64■□□□□ 0.9
TMEM39B-201ENST00000336294 USP44Q9H0E7 712 aa20.64■□□□□ 0.9
TMEM39B-201ENST00000336294 NLRP2Q9NX02 1062 aa20.64■□□□□ 0.9
TMEM39B-201ENST00000336294 OTUD7AQ8TE49 926 aaPredicted RBP20.64■□□□□ 0.89
TMEM39B-201ENST00000336294 PLEKHG2Q9H7P9 1386 aa20.63■□□□□ 0.89
TMEM39B-201ENST00000336294 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
TMEM39B-201ENST00000336294 SPATA31A3Q5VYP0 1347 aa20.63■□□□□ 0.89
TMEM39B-201ENST00000336294 TATP17735 454 aaPredicted RBP20.63■□□□□ 0.89
TMEM39B-201ENST00000336294 HSCBQ8IWL3 235 aa20.63■□□□□ 0.89
TMEM39B-201ENST00000336294 SLKQ9H2G2 1235 aaPredicted RBP20.63■□□□□ 0.89
TMEM39B-201ENST00000336294 DBF4Q9UBU7 674 aaPredicted RBP20.63■□□□□ 0.89
TMEM39B-201ENST00000336294 LRRFIP2Q9Y608 721 aaKnown RBP20.63■□□□□ 0.89
TMEM39B-201ENST00000336294 CRYBG1Q9Y4K1 1723 aa20.63■□□□□ 0.89
TMEM39B-201ENST00000336294 ANTXR1Q9H6X2 564 aa20.62■□□□□ 0.89
TMEM39B-201ENST00000336294 GIGYF1O75420 1035 aaPredicted RBP20.62■□□□□ 0.89
TMEM39B-201ENST00000336294 DNAAF4Q8WXU2 420 aa20.62■□□□□ 0.89
TMEM39B-201ENST00000336294 OSBPL3Q9H4L5 887 aa20.62■□□□□ 0.89
TMEM39B-201ENST00000336294 SPG7Q9UQ90 795 aa20.62■□□□□ 0.89
TMEM39B-201ENST00000336294 XIRP1Q702N8 1843 aaKnown RBP20.61■□□□□ 0.89
TMEM39B-201ENST00000336294 PNMA6EA0A0J9YXQ4 647 aa20.61■□□□□ 0.89
TMEM39B-201ENST00000336294 LRRCC1Q9C099 1032 aa20.61■□□□□ 0.89
TMEM39B-201ENST00000336294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.61■□□□□ 0.89
TMEM39B-201ENST00000336294 EXOC6BQ9Y2D4 811 aa20.61■□□□□ 0.89
TMEM39B-201ENST00000336294 CSB-PGBD3P0DP91 1061 aa20.6■□□□□ 0.89
TMEM39B-201ENST00000336294 CASC1Q6TDU7 716 aa20.6■□□□□ 0.89
TMEM39B-201ENST00000336294 CABLES1Q8TDN4 633 aa20.6■□□□□ 0.89
TMEM39B-201ENST00000336294 SNX21Q969T3 373 aa20.6■□□□□ 0.89
TMEM39B-201ENST00000336294 IBTKQ9P2D0 1353 aaPredicted RBP20.6■□□□□ 0.89
TMEM39B-201ENST00000336294 CPDO75976 1380 aa20.59■□□□□ 0.89
TMEM39B-201ENST00000336294 STRCQ7RTU9 1775 aa20.59■□□□□ 0.89
TMEM39B-201ENST00000336294 PI4KAP2A4QPH2 592 aa20.59■□□□□ 0.89
TMEM39B-201ENST00000336294 SDSP20132 328 aa20.59■□□□□ 0.89
TMEM39B-201ENST00000336294 BEND3Q5T5X7 828 aa20.59■□□□□ 0.89
TMEM39B-201ENST00000336294 PI4KAP1Q8N8J0 262 aa20.59■□□□□ 0.89
TMEM39B-201ENST00000336294 SCN11AQ9UI33 1791 aa20.59■□□□□ 0.89
TMEM39B-201ENST00000336294 MEGF6O75095 1541 aa20.58■□□□□ 0.89
TMEM39B-201ENST00000336294 PDE1AP54750 535 aa20.58■□□□□ 0.89
TMEM39B-201ENST00000336294 GSE1Q14687 1217 aa20.58■□□□□ 0.89
TMEM39B-201ENST00000336294 ADCY9O60503 1353 aa20.58■□□□□ 0.89
TMEM39B-201ENST00000336294 PHKG2P15735 406 aa20.57■□□□□ 0.88
TMEM39B-201ENST00000336294 SSH3Q8TE77 659 aa20.57■□□□□ 0.88
TMEM39B-201ENST00000336294 FRAT2O75474 233 aaPredicted RBP20.57■□□□□ 0.88
TMEM39B-201ENST00000336294 KDM6AO15550 1401 aaPredicted RBP20.57■□□□□ 0.88
TMEM39B-201ENST00000336294 ANXA1P04083 346 aa20.56■□□□□ 0.88
TMEM39B-201ENST00000336294 CHRNA2Q15822 529 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms