RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 SLC26A8Q96RN1 970 aa24.42■■□□□ 1.5
CDCA4-201ENST00000336219 ZDHHC9Q9Y397 364 aa24.42■■□□□ 1.5
CDCA4-201ENST00000336219 HMMRO75330 724 aa24.42■■□□□ 1.5
CDCA4-201ENST00000336219 PRIM1P49642 420 aaKnown RBP24.42■■□□□ 1.5
CDCA4-201ENST00000336219 GPT2Q8TD30 523 aa24.42■■□□□ 1.5
CDCA4-201ENST00000336219 GLIPR1L2Q4G1C9 344 aa24.41■■□□□ 1.5
CDCA4-201ENST00000336219 RGPD8O14715 1765 aaPredicted RBP24.41■■□□□ 1.5
CDCA4-201ENST00000336219 CCT4P50991 539 aaKnown RBP24.41■■□□□ 1.5
CDCA4-201ENST00000336219 CEP170BQ9Y4F5 1589 aaPredicted RBP24.41■■□□□ 1.5
CDCA4-201ENST00000336219 F6X3S4 739 aa24.4■■□□□ 1.5
CDCA4-201ENST00000336219 SLC4A10Q6U841 1118 aa24.4■■□□□ 1.5
CDCA4-201ENST00000336219 IGSF1Q8N6C5 1336 aa24.4■■□□□ 1.5
CDCA4-201ENST00000336219 MSNP26038 577 aaKnown RBP24.39■■□□□ 1.49
CDCA4-201ENST00000336219 NSFL1CQ9UNZ2 370 aaKnown RBP24.39■■□□□ 1.49
CDCA4-201ENST00000336219 PIK3C2AO00443 1686 aa24.38■■□□□ 1.49
CDCA4-201ENST00000336219 EYA1Q99502 592 aa24.38■■□□□ 1.49
CDCA4-201ENST00000336219 OSBPL3Q9H4L5 887 aa24.38■■□□□ 1.49
CDCA4-201ENST00000336219 LRRC37A3O60309 1634 aa24.38■■□□□ 1.49
CDCA4-201ENST00000336219 TPM2P07951 284 aa24.37■■□□□ 1.49
CDCA4-201ENST00000336219 AMOTL2Q9Y2J4 779 aa24.37■■□□□ 1.49
CDCA4-201ENST00000336219 FAM208AQ9UK61 1670 aaKnown RBP24.36■■□□□ 1.49
CDCA4-201ENST00000336219 ST18O60284 1047 aa24.36■■□□□ 1.49
CDCA4-201ENST00000336219 REC8O95072 547 aa24.36■■□□□ 1.49
CDCA4-201ENST00000336219 DIP2AQ14689 1571 aa24.36■■□□□ 1.49
CDCA4-201ENST00000336219 AMPHP49418 695 aa24.36■■□□□ 1.49
CDCA4-201ENST00000336219 TSHZ3Q63HK5 1081 aa24.36■■□□□ 1.49
CDCA4-201ENST00000336219 EID1Q9Y6B2 187 aa24.35■■□□□ 1.49
CDCA4-201ENST00000336219 OFD1O75665 1012 aa24.35■■□□□ 1.49
CDCA4-201ENST00000336219 PDE1AP54750 535 aa24.35■■□□□ 1.49
CDCA4-201ENST00000336219 NGDNQ8NEJ9 315 aaKnown RBP24.35■■□□□ 1.49
CDCA4-201ENST00000336219 TUBGCP6Q96RT7 1819 aa24.34■■□□□ 1.49
CDCA4-201ENST00000336219 GNAI2P04899 355 aa24.34■■□□□ 1.49
CDCA4-201ENST00000336219 TMEM63CQ9P1W3 806 aa24.34■■□□□ 1.49
CDCA4-201ENST00000336219 ERC2O15083 957 aa24.34■■□□□ 1.49
CDCA4-201ENST00000336219 STK31Q9BXU1 1019 aa24.34■■□□□ 1.49
CDCA4-201ENST00000336219 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.34■■□□□ 1.49
CDCA4-201ENST00000336219 XRN1Q8IZH2 1706 aaKnown RBP24.34■■□□□ 1.49
CDCA4-201ENST00000336219 CACNA1FO60840 1977 aa24.33■■□□□ 1.49
CDCA4-201ENST00000336219 CWC22Q9HCG8 908 aaKnown RBP24.33■■□□□ 1.49
CDCA4-201ENST00000336219 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.49
CDCA4-201ENST00000336219 SLIT1O75093 1534 aa24.33■■□□□ 1.48
CDCA4-201ENST00000336219 SYCE3A1L190 88 aa24.32■■□□□ 1.48
CDCA4-201ENST00000336219 ZMYND15Q9H091 742 aa24.32■■□□□ 1.48
CDCA4-201ENST00000336219 XPCQ01831 940 aaPredicted RBP24.31■■□□□ 1.48
CDCA4-201ENST00000336219 TBX22Q9Y458 520 aa24.31■■□□□ 1.48
CDCA4-201ENST00000336219 ARHGAP23Q9P227 1491 aa24.31■■□□□ 1.48
CDCA4-201ENST00000336219 RBM10P98175 930 aaKnown RBP24.31■■□□□ 1.48
CDCA4-201ENST00000336219 FLIIQ13045 1269 aa24.31■■□□□ 1.48
CDCA4-201ENST00000336219 NOL8Q76FK4 1167 aaKnown RBP24.31■■□□□ 1.48
CDCA4-201ENST00000336219 EXOC6BQ9Y2D4 811 aa24.31■■□□□ 1.48
CDCA4-201ENST00000336219 SALL3Q9BXA9 1300 aa24.3■■□□□ 1.48
CDCA4-201ENST00000336219 CEBPAP49715 358 aaPredicted RBP24.3■■□□□ 1.48
CDCA4-201ENST00000336219 R3HCC1Q9Y3T6 440 aaKnown RBP24.3■■□□□ 1.48
CDCA4-201ENST00000336219 N4BP2Q86UW6 1770 aaPredicted RBP24.3■■□□□ 1.48
CDCA4-201ENST00000336219 CCDC30Q5VVM6 783 aa24.29■■□□□ 1.48
CDCA4-201ENST00000336219 PDLIM2Q96JY6 352 aa24.29■■□□□ 1.48
CDCA4-201ENST00000336219 MARF1Q9Y4F3 1742 aaKnown RBP24.29■■□□□ 1.48
CDCA4-201ENST00000336219 NEK4P51957 841 aa24.29■■□□□ 1.48
CDCA4-201ENST00000336219 GNAT3A8MTJ3 354 aa24.28■■□□□ 1.48
CDCA4-201ENST00000336219 GNAI3P08754 354 aa24.28■■□□□ 1.48
CDCA4-201ENST00000336219 FKBP5Q13451 457 aaPredicted RBP24.28■■□□□ 1.48
CDCA4-201ENST00000336219 RNF214Q8ND24 703 aa24.28■■□□□ 1.48
CDCA4-201ENST00000336219 NWD1Q149M9 1564 aa24.28■■□□□ 1.48
CDCA4-201ENST00000336219 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.27■■□□□ 1.48
CDCA4-201ENST00000336219 TMX3Q96JJ7 454 aa24.27■■□□□ 1.48
CDCA4-201ENST00000336219 LRRCC1Q9C099 1032 aa24.27■■□□□ 1.48
CDCA4-201ENST00000336219 NOL7Q9UMY1 257 aaKnown RBP24.27■■□□□ 1.48
CDCA4-201ENST00000336219 NLRP6P59044 892 aa24.27■■□□□ 1.48
CDCA4-201ENST00000336219 FOXD4L6Q3SYB3 417 aaPredicted RBP24.26■■□□□ 1.47
CDCA4-201ENST00000336219 FOXD4L3Q6VB84 417 aaPredicted RBP24.26■■□□□ 1.47
CDCA4-201ENST00000336219 PNMA6EA0A0J9YXQ4 647 aa24.26■■□□□ 1.47
CDCA4-201ENST00000336219 HOXC9P31274 260 aa24.26■■□□□ 1.47
CDCA4-201ENST00000336219 LRSAM1Q6UWE0 723 aa24.26■■□□□ 1.47
CDCA4-201ENST00000336219 ATP8B2P98198 1209 aa24.25■■□□□ 1.47
CDCA4-201ENST00000336219 PKNOX2Q96KN3 472 aa24.25■■□□□ 1.47
CDCA4-201ENST00000336219 PALD1Q9ULE6 856 aa24.25■■□□□ 1.47
CDCA4-201ENST00000336219 USP54Q70EL1 1684 aa24.25■■□□□ 1.47
CDCA4-201ENST00000336219 MX1P20591 662 aa24.24■■□□□ 1.47
CDCA4-201ENST00000336219 SOS1Q07889 1333 aaPredicted RBP24.24■■□□□ 1.47
CDCA4-201ENST00000336219 MAP3K5Q99683 1374 aa24.24■■□□□ 1.47
CDCA4-201ENST00000336219 NECTIN2Q92692 538 aa24.24■■□□□ 1.47
CDCA4-201ENST00000336219 IL17REQ8NFR9 667 aa24.23■■□□□ 1.47
CDCA4-201ENST00000336219 ANKARQ7Z5J8 1434 aa24.23■■□□□ 1.47
CDCA4-201ENST00000336219 ESYT1Q9BSJ8 1104 aa24.23■■□□□ 1.47
CDCA4-201ENST00000336219 PXDNLA1KZ92 1463 aa24.22■■□□□ 1.47
CDCA4-201ENST00000336219 HS1BP3Q53T59 392 aa24.22■■□□□ 1.47
CDCA4-201ENST00000336219 PDCL3Q9H2J4 239 aa24.22■■□□□ 1.47
CDCA4-201ENST00000336219 BABAM1Q9NWV8 329 aa24.21■■□□□ 1.47
CDCA4-201ENST00000336219 ZNF500O60304 480 aaPredicted RBP24.21■■□□□ 1.47
CDCA4-201ENST00000336219 TAF7Q15545 349 aaPredicted RBP24.2■■□□□ 1.46
CDCA4-201ENST00000336219 LRRFIP2Q9Y608 721 aaKnown RBP24.2■■□□□ 1.46
CDCA4-201ENST00000336219 NUTM2GQ5VZR2 741 aa24.2■■□□□ 1.46
CDCA4-201ENST00000336219 GDPD2Q9HCC8 539 aa24.2■■□□□ 1.46
CDCA4-201ENST00000336219 STAP2Q9UGK3 403 aa24.2■■□□□ 1.46
CDCA4-201ENST00000336219 ZKSCAN5Q9Y2L8 839 aa24.2■■□□□ 1.46
CDCA4-201ENST00000336219 FAM13BQ9NYF5 915 aa24.19■■□□□ 1.46
CDCA4-201ENST00000336219 ZBTB7CA1YPR0 619 aa24.18■■□□□ 1.46
CDCA4-201ENST00000336219 BRD1O95696 1058 aa24.18■■□□□ 1.46
CDCA4-201ENST00000336219 RILPL2Q969X0 211 aa24.18■■□□□ 1.46
CDCA4-201ENST00000336219 USP44Q9H0E7 712 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms