RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 KCNQ2O43526 872 aa19.76■□□□□ 0.75
CMC1-201ENST00000334841 ZNF853P0CG23 659 aa19.76■□□□□ 0.75
CMC1-201ENST00000334841 PRIM1P49642 420 aaKnown RBP19.76■□□□□ 0.75
CMC1-201ENST00000334841 GOLGA2Q08379 1002 aa19.76■□□□□ 0.75
CMC1-201ENST00000334841 FAM196AQ6ZSG2 479 aa19.76■□□□□ 0.75
CMC1-201ENST00000334841 IFT57Q9NWB7 429 aa19.76■□□□□ 0.75
CMC1-201ENST00000334841 TMOD3Q9NYL9 352 aa19.76■□□□□ 0.75
CMC1-201ENST00000334841 BTAF1O14981 1849 aa19.75■□□□□ 0.75
CMC1-201ENST00000334841 SYTL4Q96C24 671 aaPredicted RBP19.75■□□□□ 0.75
CMC1-201ENST00000334841 CDCA7LQ96GN5 454 aa19.75■□□□□ 0.75
CMC1-201ENST00000334841 TAF7Q15545 349 aaPredicted RBP19.74■□□□□ 0.75
CMC1-201ENST00000334841 PTF1AQ7RTS3 328 aa19.74■□□□□ 0.75
CMC1-201ENST00000334841 PIGBQ92521 554 aa19.74■□□□□ 0.75
CMC1-201ENST00000334841 CFAP44Q96MT7 982 aa19.74■□□□□ 0.75
CMC1-201ENST00000334841 LAS1LQ9Y4W2 734 aaKnown RBP19.74■□□□□ 0.75
CMC1-201ENST00000334841 UBR2Q8IWV8 1755 aa19.74■□□□□ 0.75
CMC1-201ENST00000334841 TNS1Q9HBL0 1735 aaKnown RBP19.73■□□□□ 0.75
CMC1-201ENST00000334841 MIS18AQ9NYP9 233 aa19.73■□□□□ 0.75
CMC1-201ENST00000334841 FANCIQ9NVI1 1328 aa19.73■□□□□ 0.75
CMC1-201ENST00000334841 KCPQ6ZWJ8 1503 aa19.72■□□□□ 0.75
CMC1-201ENST00000334841 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
CMC1-201ENST00000334841 CHL1O00533 1208 aa19.72■□□□□ 0.75
CMC1-201ENST00000334841 GNAI1P63096 354 aa19.72■□□□□ 0.75
CMC1-201ENST00000334841 SLFN5Q08AF3 891 aa19.72■□□□□ 0.75
CMC1-201ENST00000334841 TSR2Q969E8 191 aaKnown RBP19.72■□□□□ 0.75
CMC1-201ENST00000334841 MBIPQ9NS73 344 aa19.72■□□□□ 0.75
CMC1-201ENST00000334841 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
CMC1-201ENST00000334841 E9PSI1 815 aa19.71■□□□□ 0.75
CMC1-201ENST00000334841 KCNQ3O43525 872 aa19.7■□□□□ 0.74
CMC1-201ENST00000334841 SLC39A6Q13433 755 aa19.7■□□□□ 0.74
CMC1-201ENST00000334841 BABAM1Q9NWV8 329 aa19.7■□□□□ 0.74
CMC1-201ENST00000334841 TRMT2AQ8IZ69 625 aaKnown RBP19.69■□□□□ 0.74
CMC1-201ENST00000334841 BCL11BQ9C0K0 894 aaPredicted RBP19.69■□□□□ 0.74
CMC1-201ENST00000334841 MYH16Q9H6N6 1097 aa19.69■□□□□ 0.74
CMC1-201ENST00000334841 ASAP1Q9ULH1 1129 aa19.69■□□□□ 0.74
CMC1-201ENST00000334841 EP400Q96L91 3159 aa19.69■□□□□ 0.74
CMC1-201ENST00000334841 TRIM37O94972 964 aa19.68■□□□□ 0.74
CMC1-201ENST00000334841 DUSP27Q5VZP5 1158 aa19.68■□□□□ 0.74
CMC1-201ENST00000334841 ZNF790Q6PG37 636 aa19.68■□□□□ 0.74
CMC1-201ENST00000334841 ATG3Q9NT62 314 aa19.68■□□□□ 0.74
CMC1-201ENST00000334841 C5P01031 1676 aa19.67■□□□□ 0.74
CMC1-201ENST00000334841 PALLDQ8WX93 1383 aa19.66■□□□□ 0.74
CMC1-201ENST00000334841 CICQ96RK0 1608 aaPredicted RBP19.65■□□□□ 0.74
CMC1-201ENST00000334841 LY75O60449 1722 aa19.65■□□□□ 0.74
CMC1-201ENST00000334841 KRT24Q2M2I5 525 aa19.65■□□□□ 0.74
CMC1-201ENST00000334841 TTC5Q8N0Z6 440 aa19.65■□□□□ 0.74
CMC1-201ENST00000334841 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
CMC1-201ENST00000334841 TJP1Q07157 1748 aa19.65■□□□□ 0.74
CMC1-201ENST00000334841 EIF4A1P60842 406 aaKnown RBP19.64■□□□□ 0.73
CMC1-201ENST00000334841 ZNF496Q96IT1 587 aaPredicted RBP19.64■□□□□ 0.73
CMC1-201ENST00000334841 LAMB4A4D0S4 1761 aa19.63■□□□□ 0.73
CMC1-201ENST00000334841 RGPD3A6NKT7 1758 aaPredicted RBP19.62■□□□□ 0.73
CMC1-201ENST00000334841 RGPD4Q7Z3J3 1758 aa19.62■□□□□ 0.73
CMC1-201ENST00000334841 ZNF831Q5JPB2 1677 aa19.62■□□□□ 0.73
CMC1-201ENST00000334841 PTCD1O75127 700 aaKnown RBP19.62■□□□□ 0.73
CMC1-201ENST00000334841 EXOSC9Q06265 439 aaKnown RBP19.62■□□□□ 0.73
CMC1-201ENST00000334841 C8orf58Q8NAV2 365 aa19.61■□□□□ 0.73
CMC1-201ENST00000334841 SMARCC1Q92922 1105 aaPredicted RBP19.61■□□□□ 0.73
CMC1-201ENST00000334841 FMNL2Q96PY5 1086 aa19.61■□□□□ 0.73
CMC1-201ENST00000334841 KAT6BQ8WYB5 2073 aa19.61■□□□□ 0.73
CMC1-201ENST00000334841 ILDR2Q71H61 639 aa19.6■□□□□ 0.73
CMC1-201ENST00000334841 TSPYL6Q8N831 410 aa19.6■□□□□ 0.73
CMC1-201ENST00000334841 SLC4A9Q96Q91 983 aa19.6■□□□□ 0.73
CMC1-201ENST00000334841 RBM42Q9BTD8 480 aaKnown RBP19.59■□□□□ 0.73
CMC1-201ENST00000334841 PRAMEF22A3QJZ6 481 aa19.58■□□□□ 0.72
CMC1-201ENST00000334841 COL5A3P25940 1745 aaPredicted RBP19.58■□□□□ 0.72
CMC1-201ENST00000334841 LOC102724428A0A0B4J2F2 783 aa19.57■□□□□ 0.72
CMC1-201ENST00000334841 ELL2O00472 640 aaPredicted RBP19.57■□□□□ 0.72
CMC1-201ENST00000334841 GIGYF1O75420 1035 aaPredicted RBP19.57■□□□□ 0.72
CMC1-201ENST00000334841 APBA3O96018 575 aa19.57■□□□□ 0.72
CMC1-201ENST00000334841 SIK1P57059 783 aa19.57■□□□□ 0.72
CMC1-201ENST00000334841 TWISTNBQ3B726 338 aaPredicted RBP19.57■□□□□ 0.72
CMC1-201ENST00000334841 VSIG10Q8N0Z9 540 aa19.56■□□□□ 0.72
CMC1-201ENST00000334841 SNRPA1P09661 255 aaKnown RBP19.55■□□□□ 0.72
CMC1-201ENST00000334841 ITPK1Q13572 414 aa19.55■□□□□ 0.72
CMC1-201ENST00000334841 RREB1Q92766 1687 aa19.55■□□□□ 0.72
CMC1-201ENST00000334841 PLSCR1O15162 318 aa19.54■□□□□ 0.72
CMC1-201ENST00000334841 HOXB7P09629 217 aa19.54■□□□□ 0.72
CMC1-201ENST00000334841 DNAJC10Q8IXB1 793 aa19.54■□□□□ 0.72
CMC1-201ENST00000334841 SOS1Q07889 1333 aaPredicted RBP19.53■□□□□ 0.72
CMC1-201ENST00000334841 TAF1LQ8IZX4 1826 aa19.53■□□□□ 0.72
CMC1-201ENST00000334841 VAMP4O75379 141 aa19.53■□□□□ 0.72
CMC1-201ENST00000334841 ATP6V1AP38606 617 aa19.53■□□□□ 0.72
CMC1-201ENST00000334841 KCNQ4P56696 695 aa19.53■□□□□ 0.72
CMC1-201ENST00000334841 CCNL1Q9UK58 526 aaPredicted RBP19.53■□□□□ 0.72
CMC1-201ENST00000334841 CT47B1P0C2W7 299 aaPredicted RBP19.51■□□□□ 0.71
CMC1-201ENST00000334841 SF3B2Q13435 895 aaKnown RBP19.51■□□□□ 0.71
CMC1-201ENST00000334841 TXNRD1Q16881 649 aa19.51■□□□□ 0.71
CMC1-201ENST00000334841 PROM2Q8N271 834 aa19.51■□□□□ 0.71
CMC1-201ENST00000334841 LRRC4BQ9NT99 713 aa19.51■□□□□ 0.71
CMC1-201ENST00000334841 USP16Q9Y5T5 823 aa19.51■□□□□ 0.71
CMC1-201ENST00000334841 C4BP0C0L5 1744 aa19.51■□□□□ 0.71
CMC1-201ENST00000334841 SLC27A3Q5K4L6 730 aa19.5■□□□□ 0.71
CMC1-201ENST00000334841 HDGFL1Q5TGJ6 251 aa19.5■□□□□ 0.71
CMC1-201ENST00000334841 LINC00116Q8NCU8 138 aa19.5■□□□□ 0.71
CMC1-201ENST00000334841 NECTIN2Q92692 538 aa19.5■□□□□ 0.71
CMC1-201ENST00000334841 UPF1Q92900 1129 aaKnown RBP eCLIP19.5■□□□□ 0.71
CMC1-201ENST00000334841 NUP188Q5SRE5 1749 aa19.5■□□□□ 0.71
CMC1-201ENST00000334841 CYP19A1P11511 503 aaPredicted RBP19.49■□□□□ 0.71
CMC1-201ENST00000334841 EIF2S2P20042 333 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms