RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 APBB1O00213 710 aa13.37□□□□□ -0.27
AP1S3-201ENST00000334271 AEBP1Q8IUX7 1158 aa13.37□□□□□ -0.27
AP1S3-201ENST00000334271 COL14A1Q05707 1796 aaKnown RBP13.37□□□□□ -0.27
AP1S3-201ENST00000334271 RGPD5Q99666 1765 aa13.37□□□□□ -0.27
AP1S3-201ENST00000334271 MFAP1P55081 439 aaKnown RBP13.37□□□□□ -0.27
AP1S3-201ENST00000334271 CRB1P82279 1406 aa13.37□□□□□ -0.27
AP1S3-201ENST00000334271 CHL1O00533 1208 aa13.36□□□□□ -0.27
AP1S3-201ENST00000334271 RARSP54136 660 aaKnown RBP13.36□□□□□ -0.27
AP1S3-201ENST00000334271 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
AP1S3-201ENST00000334271 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
AP1S3-201ENST00000334271 DNAJC2Q99543 621 aaKnown RBP13.36□□□□□ -0.27
AP1S3-201ENST00000334271 RGPD2P0DJD1 1756 aa13.35□□□□□ -0.27
AP1S3-201ENST00000334271 SENP3-EIF4A1A0A087X0R7 540 aa13.35□□□□□ -0.27
AP1S3-201ENST00000334271 MTHFSDQ2M296 383 aaKnown RBP13.35□□□□□ -0.27
AP1S3-201ENST00000334271 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
AP1S3-201ENST00000334271 TMCO4Q5TGY1 634 aa13.35□□□□□ -0.27
AP1S3-201ENST00000334271 NBPF6Q5VWK0 638 aa13.35□□□□□ -0.27
AP1S3-201ENST00000334271 NBPF4Q96M43 638 aa13.35□□□□□ -0.27
AP1S3-201ENST00000334271 KIF16BQ96L93 1317 aa13.35□□□□□ -0.27
AP1S3-201ENST00000334271 CEMIPQ8WUJ3 1361 aa13.35□□□□□ -0.27
AP1S3-201ENST00000334271 PHLPP1O60346 1717 aa13.35□□□□□ -0.27
AP1S3-201ENST00000334271 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
AP1S3-201ENST00000334271 IPO8O15397 1037 aaKnown RBP13.34□□□□□ -0.27
AP1S3-201ENST00000334271 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
AP1S3-201ENST00000334271 GPATCH11Q8N954 259 aa13.33□□□□□ -0.27
AP1S3-201ENST00000334271 WDR17Q8IZU2 1322 aa13.33□□□□□ -0.28
AP1S3-201ENST00000334271 CACNA1FO60840 1977 aa13.33□□□□□ -0.28
AP1S3-201ENST00000334271 PTMAP06454 111 aaKnown RBP13.32□□□□□ -0.28
AP1S3-201ENST00000334271 HSP90AB1P08238 724 aaKnown RBP13.32□□□□□ -0.28
AP1S3-201ENST00000334271 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
AP1S3-201ENST00000334271 SPG7Q9UQ90 795 aa13.32□□□□□ -0.28
AP1S3-201ENST00000334271 COL5A2P05997 1499 aaPredicted RBP13.31□□□□□ -0.28
AP1S3-201ENST00000334271 HOXB7P09629 217 aa13.31□□□□□ -0.28
AP1S3-201ENST00000334271 RAPGEF4Q8WZA2 1011 aa13.31□□□□□ -0.28
AP1S3-201ENST00000334271 PRDM11Q9NQV5 511 aa13.31□□□□□ -0.28
AP1S3-201ENST00000334271 AXIN2Q9Y2T1 843 aa13.31□□□□□ -0.28
AP1S3-201ENST00000334271 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
AP1S3-201ENST00000334271 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
AP1S3-201ENST00000334271 ZC3H6P61129 1189 aaKnown RBP13.31□□□□□ -0.28
AP1S3-201ENST00000334271 DDX17Q92841 729 aaKnown RBP13.31□□□□□ -0.28
AP1S3-201ENST00000334271 MBIPQ9NS73 344 aa13.31□□□□□ -0.28
AP1S3-201ENST00000334271 C1orf141Q5JVX7 400 aa13.3□□□□□ -0.28
AP1S3-201ENST00000334271 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
AP1S3-201ENST00000334271 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
AP1S3-201ENST00000334271 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
AP1S3-201ENST00000334271 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
AP1S3-201ENST00000334271 TAF7Q15545 349 aaPredicted RBP13.29□□□□□ -0.28
AP1S3-201ENST00000334271 ZKSCAN2Q63HK3 967 aa13.29□□□□□ -0.28
AP1S3-201ENST00000334271 CARD10Q9BWT7 1032 aa13.29□□□□□ -0.28
AP1S3-201ENST00000334271 VIRMAQ69YN4 1812 aaKnown RBP13.29□□□□□ -0.28
AP1S3-201ENST00000334271 VAMP4O75379 141 aa13.29□□□□□ -0.28
AP1S3-201ENST00000334271 SCN11AQ9UI33 1791 aa13.29□□□□□ -0.28
AP1S3-201ENST00000334271 TSR2Q969E8 191 aaKnown RBP13.28□□□□□ -0.28
AP1S3-201ENST00000334271 MRC1P22897 1456 aa13.28□□□□□ -0.28
AP1S3-201ENST00000334271 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
AP1S3-201ENST00000334271 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.28
AP1S3-201ENST00000334271 TWISTNBQ3B726 338 aaPredicted RBP13.27□□□□□ -0.28
AP1S3-201ENST00000334271 CSB-PGBD3P0DP91 1061 aa13.27□□□□□ -0.29
AP1S3-201ENST00000334271 CANXP27824 592 aaKnown RBP13.27□□□□□ -0.29
AP1S3-201ENST00000334271 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.29
AP1S3-201ENST00000334271 SMC4Q9NTJ3 1288 aa13.27□□□□□ -0.29
AP1S3-201ENST00000334271 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.29
AP1S3-201ENST00000334271 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
AP1S3-201ENST00000334271 BCAR3O75815 825 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 CDCA7Q9BWT1 371 aaPredicted RBP13.25□□□□□ -0.29
AP1S3-201ENST00000334271 PTPRCP08575 1304 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 FAM83GA6ND36 823 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 ATF7IPQ6VMQ6 1270 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 MCM10Q7L590 875 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 CABLES1Q8TDN4 633 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 SSH1Q8WYL5 1049 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
AP1S3-201ENST00000334271 TSPYL4Q9UJ04 414 aa13.25□□□□□ -0.29
AP1S3-201ENST00000334271 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
AP1S3-201ENST00000334271 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
AP1S3-201ENST00000334271 DCAF5Q96JK2 942 aa13.24□□□□□ -0.29
AP1S3-201ENST00000334271 THRAP3Q9Y2W1 955 aaKnown RBP13.24□□□□□ -0.29
AP1S3-201ENST00000334271 WNK3Q9BYP7 1800 aa13.24□□□□□ -0.29
AP1S3-201ENST00000334271 PCDH11XQ9BZA7 1347 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 PCDH11YQ9BZA8 1340 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 MEGF6O75095 1541 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 TEFQ10587 303 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 NKX1-1Q15270 411 aaPredicted RBP13.23□□□□□ -0.29
AP1S3-201ENST00000334271 DZIP1LQ8IYY4 767 aaKnown RBP13.23□□□□□ -0.29
AP1S3-201ENST00000334271 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
AP1S3-201ENST00000334271 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
AP1S3-201ENST00000334271 LRP6O75581 1613 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 NRAPQ86VF7 1730 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 EXOC8Q8IYI6 725 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 EXOC6Q8TAG9 804 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 CRBNQ96SW2 442 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 DDX19BQ9UMR2 479 aa13.23□□□□□ -0.29
AP1S3-201ENST00000334271 JCADQ9P266 1359 aa13.22□□□□□ -0.29
AP1S3-201ENST00000334271 PHKG2P15735 406 aa13.22□□□□□ -0.29
AP1S3-201ENST00000334271 DCTN1Q14203 1278 aa13.22□□□□□ -0.29
AP1S3-201ENST00000334271 IL2RBP14784 551 aa13.21□□□□□ -0.29
AP1S3-201ENST00000334271 EVA1CP58658 441 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms