RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-202ENST00000333990 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-202ENST00000333990 ANKRD18BA2A2Z9 1011 aa13.47□□□□□ -0.25
POLR1B-202ENST00000333990 FKBP4Q02790 459 aaKnown RBP eCLIP13.47□□□□□ -0.25
POLR1B-202ENST00000333990 AEBP1Q8IUX7 1158 aa13.47□□□□□ -0.25
POLR1B-202ENST00000333990 SOS1Q07889 1333 aaPredicted RBP13.47□□□□□ -0.25
POLR1B-202ENST00000333990 ERVK-7P63135 1459 aa13.46□□□□□ -0.25
POLR1B-202ENST00000333990 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.25
POLR1B-202ENST00000333990 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.25
POLR1B-202ENST00000333990 FOXD4L5Q5VV16 416 aaPredicted RBP13.46□□□□□ -0.25
POLR1B-202ENST00000333990 FOXD4L4Q8WXT5 416 aaPredicted RBP13.46□□□□□ -0.25
POLR1B-202ENST00000333990 CWC22Q9HCG8 908 aaKnown RBP13.46□□□□□ -0.25
POLR1B-202ENST00000333990 PCDH11XQ9BZA7 1347 aa13.46□□□□□ -0.25
POLR1B-202ENST00000333990 PCDH11YQ9BZA8 1340 aa13.46□□□□□ -0.25
POLR1B-202ENST00000333990 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
POLR1B-202ENST00000333990 CCDC47Q96A33 483 aaKnown RBP13.46□□□□□ -0.25
POLR1B-202ENST00000333990 CDC5LQ99459 802 aaKnown RBP13.46□□□□□ -0.25
POLR1B-202ENST00000333990 IL1RAPL2Q9NP60 686 aa13.46□□□□□ -0.25
POLR1B-202ENST00000333990 RFC4P35249 363 aa13.46□□□□□ -0.26
POLR1B-202ENST00000333990 RABEP1Q15276 862 aa13.46□□□□□ -0.26
POLR1B-202ENST00000333990 BTG4Q9NY30 223 aa13.46□□□□□ -0.26
POLR1B-202ENST00000333990 CCDC85AQ96PX6 553 aaPredicted RBP13.46□□□□□ -0.26
POLR1B-202ENST00000333990 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.46□□□□□ -0.26
POLR1B-202ENST00000333990 LRP2BPQ9P2M1 347 aa13.46□□□□□ -0.26
POLR1B-202ENST00000333990 EXOC6BQ9Y2D4 811 aa13.46□□□□□ -0.26
POLR1B-202ENST00000333990 F6X3S4 739 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 KIAA2012Q0VF49 1180 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 RPGRQ92834 1020 aaKnown RBP13.45□□□□□ -0.26
POLR1B-202ENST00000333990 GZF1Q9H116 711 aaPredicted RBP13.45□□□□□ -0.26
POLR1B-202ENST00000333990 ARHGAP31Q2M1Z3 1444 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 PDCP20941 246 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 MTHFSDQ2M296 383 aaKnown RBP13.45□□□□□ -0.26
POLR1B-202ENST00000333990 KDM6BO15054 1643 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 PI4KAP2A4QPH2 592 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 VPS37CA5D8V6 355 aaPredicted RBP13.45□□□□□ -0.26
POLR1B-202ENST00000333990 PI4KAP1Q8N8J0 262 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 TMOD2Q9NZR1 351 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 MAP3K2Q9Y2U5 619 aa13.45□□□□□ -0.26
POLR1B-202ENST00000333990 MSNP26038 577 aaKnown RBP13.44□□□□□ -0.26
POLR1B-202ENST00000333990 DDX49Q9Y6V7 483 aaKnown RBP13.44□□□□□ -0.26
POLR1B-202ENST00000333990 ADCY10Q96PN6 1610 aa13.44□□□□□ -0.26
POLR1B-202ENST00000333990 PLXNC1O60486 1568 aa13.44□□□□□ -0.26
POLR1B-202ENST00000333990 TRIM27P14373 513 aa13.44□□□□□ -0.26
POLR1B-202ENST00000333990 RAI14Q9P0K7 980 aa13.44□□□□□ -0.26
POLR1B-202ENST00000333990 ANKRD1Q15327 319 aa13.44□□□□□ -0.26
POLR1B-202ENST00000333990 HOOK1Q9UJC3 728 aaKnown RBP13.44□□□□□ -0.26
POLR1B-202ENST00000333990 PTPRTO14522 1441 aa13.43□□□□□ -0.26
POLR1B-202ENST00000333990 MYOM2P54296 1465 aa13.43□□□□□ -0.26
POLR1B-202ENST00000333990 NEK4P51957 841 aa13.43□□□□□ -0.26
POLR1B-202ENST00000333990 IKQ13123 557 aaPredicted RBP13.43□□□□□ -0.26
POLR1B-202ENST00000333990 BABAM1Q9NWV8 329 aa13.43□□□□□ -0.26
POLR1B-202ENST00000333990 GPTP24298 496 aa13.43□□□□□ -0.26
POLR1B-202ENST00000333990 SLC5A1P13866 664 aa13.43□□□□□ -0.26
POLR1B-202ENST00000333990 ATP6V1AP38606 617 aa13.43□□□□□ -0.26
POLR1B-202ENST00000333990 KRT32Q14532 448 aa13.43□□□□□ -0.26
POLR1B-202ENST00000333990 PLEKHH1Q9ULM0 1364 aa13.43□□□□□ -0.26
POLR1B-202ENST00000333990 ALDH1L1O75891 902 aa13.42□□□□□ -0.26
POLR1B-202ENST00000333990 LRRFIP2Q9Y608 721 aaKnown RBP13.42□□□□□ -0.26
POLR1B-202ENST00000333990 TMEM94Q12767 1356 aa13.42□□□□□ -0.26
POLR1B-202ENST00000333990 RBM5P52756 815 aaKnown RBP eCLIP13.42□□□□□ -0.26
POLR1B-202ENST00000333990 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
POLR1B-202ENST00000333990 CYP46A1Q9Y6A2 500 aa13.42□□□□□ -0.26
POLR1B-202ENST00000333990 IDH1O75874 414 aaKnown RBP13.41□□□□□ -0.26
POLR1B-202ENST00000333990 MX1P20591 662 aa13.41□□□□□ -0.26
POLR1B-202ENST00000333990 DDX46Q7L014 1031 aaKnown RBP13.41□□□□□ -0.26
POLR1B-202ENST00000333990 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
POLR1B-202ENST00000333990 ABCF2Q9UG63 623 aa13.41□□□□□ -0.26
POLR1B-202ENST00000333990 GOLGA6L3A6NEY3 463 aa13.41□□□□□ -0.26
POLR1B-202ENST00000333990 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
POLR1B-202ENST00000333990 ACSBG1Q96GR2 724 aa13.41□□□□□ -0.26
POLR1B-202ENST00000333990 ANKIB1Q9P2G1 1089 aa13.41□□□□□ -0.26
POLR1B-202ENST00000333990 CDC42BPAQ5VT25 1732 aa13.41□□□□□ -0.26
POLR1B-202ENST00000333990 ABCC3O15438 1527 aa13.41□□□□□ -0.26
POLR1B-202ENST00000333990 TPD52L1Q16890 204 aaPredicted RBP13.4□□□□□ -0.26
POLR1B-202ENST00000333990 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 NFATC2IPQ8NCF5 419 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 ZNF287Q9HBT7 754 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 SHROOM2Q13796 1616 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 TDO2P48775 406 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 KSR2Q6VAB6 950 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 COPS6Q7L5N1 327 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 XAGE3Q8WTP9 111 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 AIDAQ96BJ3 306 aa13.4□□□□□ -0.26
POLR1B-202ENST00000333990 ST5P78524 1137 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 NBPF6Q5VWK0 638 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
POLR1B-202ENST00000333990 SLF2Q8IX21 1173 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 BICD2Q8TD16 824 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 NBPF4Q96M43 638 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 CCDC43Q96MW1 224 aaKnown RBP13.39□□□□□ -0.27
POLR1B-202ENST00000333990 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
POLR1B-202ENST00000333990 MAP3K12Q12852 859 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
POLR1B-202ENST00000333990 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 CHPF2Q9P2E5 772 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 ATP5J2-PTCD1G3V325 749 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 BECN2A8MW95 431 aa13.39□□□□□ -0.27
POLR1B-202ENST00000333990 FOXD4L6Q3SYB3 417 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms