RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 PXDNLA1KZ92 1463 aa11.38□□□□□ -0.59
SIMC1-201ENST00000332772 CCT4P50991 539 aaKnown RBP11.38□□□□□ -0.59
SIMC1-201ENST00000332772 XPCQ01831 940 aaPredicted RBP11.38□□□□□ -0.59
SIMC1-201ENST00000332772 NUCB1Q02818 461 aa11.38□□□□□ -0.59
SIMC1-201ENST00000332772 RPAP2Q8IXW5 612 aaPredicted RBP11.38□□□□□ -0.59
SIMC1-201ENST00000332772 SIPA1L3O60292 1781 aaPredicted RBP11.37□□□□□ -0.59
SIMC1-201ENST00000332772 LMOD2Q6P5Q4 547 aa11.37□□□□□ -0.59
SIMC1-201ENST00000332772 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
SIMC1-201ENST00000332772 SKAP1Q86WV1 359 aa11.36□□□□□ -0.59
SIMC1-201ENST00000332772 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
SIMC1-201ENST00000332772 KRT24Q2M2I5 525 aa11.36□□□□□ -0.59
SIMC1-201ENST00000332772 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
SIMC1-201ENST00000332772 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
SIMC1-201ENST00000332772 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
SIMC1-201ENST00000332772 BRINP3Q76B58 766 aa11.35□□□□□ -0.59
SIMC1-201ENST00000332772 LRRC59Q96AG4 307 aaKnown RBP11.35□□□□□ -0.59
SIMC1-201ENST00000332772 MIS18AQ9NYP9 233 aa11.35□□□□□ -0.59
SIMC1-201ENST00000332772 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
SIMC1-201ENST00000332772 NOP58Q9Y2X3 529 aaKnown RBP11.35□□□□□ -0.59
SIMC1-201ENST00000332772 SCN11AQ9UI33 1791 aa11.35□□□□□ -0.59
SIMC1-201ENST00000332772 RNMTO43148 476 aaKnown RBP11.34□□□□□ -0.59
SIMC1-201ENST00000332772 EIF4A1P60842 406 aaKnown RBP11.34□□□□□ -0.59
SIMC1-201ENST00000332772 TEFQ10587 303 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 CHD1LQ86WJ1 897 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 ANKRD44Q8N8A2 993 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 ANP32EQ9BTT0 268 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 PKD1L3Q7Z443 1732 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 HEG1Q9ULI3 1381 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
SIMC1-201ENST00000332772 POLA2Q14181 598 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 ERICH6Q7L0X2 663 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 SLAIN2Q9P270 581 aa11.34□□□□□ -0.59
SIMC1-201ENST00000332772 RAPGEF4Q8WZA2 1011 aa11.33□□□□□ -0.6
SIMC1-201ENST00000332772 DCTPP1Q9H773 170 aa11.33□□□□□ -0.6
SIMC1-201ENST00000332772 SPG7Q9UQ90 795 aa11.33□□□□□ -0.6
SIMC1-201ENST00000332772 ATP10DQ9P241 1426 aa11.32□□□□□ -0.6
SIMC1-201ENST00000332772 ZBTB7CA1YPR0 619 aa11.32□□□□□ -0.6
SIMC1-201ENST00000332772 TATP17735 454 aaPredicted RBP11.32□□□□□ -0.6
SIMC1-201ENST00000332772 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
SIMC1-201ENST00000332772 FLIIQ13045 1269 aa11.32□□□□□ -0.6
SIMC1-201ENST00000332772 BTBD11A6QL63 1104 aa11.32□□□□□ -0.6
SIMC1-201ENST00000332772 HMMRO75330 724 aa11.32□□□□□ -0.6
SIMC1-201ENST00000332772 HSP90AB1P08238 724 aaKnown RBP11.32□□□□□ -0.6
SIMC1-201ENST00000332772 GNAI3P08754 354 aa11.32□□□□□ -0.6
SIMC1-201ENST00000332772 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
SIMC1-201ENST00000332772 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
SIMC1-201ENST00000332772 UPF2Q9HAU5 1272 aaKnown RBP11.32□□□□□ -0.6
SIMC1-201ENST00000332772 LGR6Q9HBX8 967 aa11.32□□□□□ -0.6
SIMC1-201ENST00000332772 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
SIMC1-201ENST00000332772 IBTKQ9P2D0 1353 aaPredicted RBP11.31□□□□□ -0.6
SIMC1-201ENST00000332772 MRC1P22897 1456 aa11.31□□□□□ -0.6
SIMC1-201ENST00000332772 ABCA3Q99758 1704 aa11.31□□□□□ -0.6
SIMC1-201ENST00000332772 MYT1Q01538 1121 aa11.31□□□□□ -0.6
SIMC1-201ENST00000332772 HDGFL1Q5TGJ6 251 aa11.31□□□□□ -0.6
SIMC1-201ENST00000332772 BMP2KLQ5H9B9 411 aa11.3□□□□□ -0.6
SIMC1-201ENST00000332772 ZNF335Q9H4Z2 1342 aaPredicted RBP11.3□□□□□ -0.6
SIMC1-201ENST00000332772 CEP85Q6P2H3 762 aa11.29□□□□□ -0.6
SIMC1-201ENST00000332772 G2E3Q7L622 706 aa11.29□□□□□ -0.6
SIMC1-201ENST00000332772 IFNL2Q8IZJ0 200 aa11.29□□□□□ -0.6
SIMC1-201ENST00000332772 FKBP5Q13451 457 aaPredicted RBP11.29□□□□□ -0.6
SIMC1-201ENST00000332772 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
SIMC1-201ENST00000332772 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
SIMC1-201ENST00000332772 DBF4Q9UBU7 674 aaPredicted RBP11.29□□□□□ -0.6
SIMC1-201ENST00000332772 GNAI2P04899 355 aa11.28□□□□□ -0.6
SIMC1-201ENST00000332772 PHKG2P15735 406 aa11.28□□□□□ -0.6
SIMC1-201ENST00000332772 ANKRD45Q5TZF3 282 aa11.28□□□□□ -0.6
SIMC1-201ENST00000332772 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
SIMC1-201ENST00000332772 DDX17Q92841 729 aaKnown RBP11.28□□□□□ -0.6
SIMC1-201ENST00000332772 GIGYF1O75420 1035 aaPredicted RBP11.27□□□□□ -0.6
SIMC1-201ENST00000332772 DCAF5Q96JK2 942 aa11.27□□□□□ -0.6
SIMC1-201ENST00000332772 HDAC5Q9UQL6 1122 aa11.27□□□□□ -0.6
SIMC1-201ENST00000332772 WDR17Q8IZU2 1322 aa11.27□□□□□ -0.6
SIMC1-201ENST00000332772 MEGF6O75095 1541 aa11.27□□□□□ -0.61
SIMC1-201ENST00000332772 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.61
SIMC1-201ENST00000332772 KCNA4P22459 653 aa11.27□□□□□ -0.61
SIMC1-201ENST00000332772 MEIS3Q99687 375 aa11.27□□□□□ -0.61
SIMC1-201ENST00000332772 LNPKQ9C0E8 428 aa11.27□□□□□ -0.61
SIMC1-201ENST00000332772 C1orf115Q9H7X2 142 aa11.27□□□□□ -0.61
SIMC1-201ENST00000332772 SLC52A2Q9HAB3 445 aa11.27□□□□□ -0.61
SIMC1-201ENST00000332772 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
SIMC1-201ENST00000332772 SLC4A10Q6U841 1118 aa11.25□□□□□ -0.61
SIMC1-201ENST00000332772 TBC1D32Q96NH3 1257 aa11.25□□□□□ -0.61
SIMC1-201ENST00000332772 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
SIMC1-201ENST00000332772 COL5A2P05997 1499 aaPredicted RBP11.25□□□□□ -0.61
SIMC1-201ENST00000332772 F6X3S4 739 aa11.25□□□□□ -0.61
SIMC1-201ENST00000332772 ATP8B2P98198 1209 aa11.25□□□□□ -0.61
SIMC1-201ENST00000332772 CABLES1Q8TDN4 633 aa11.25□□□□□ -0.61
SIMC1-201ENST00000332772 PRDM11Q9NQV5 511 aa11.25□□□□□ -0.61
SIMC1-201ENST00000332772 ALDH1L1O75891 902 aa11.24□□□□□ -0.61
SIMC1-201ENST00000332772 ZNF790Q6PG37 636 aa11.24□□□□□ -0.61
SIMC1-201ENST00000332772 DNAAF4Q8WXU2 420 aa11.24□□□□□ -0.61
SIMC1-201ENST00000332772 CARD10Q9BWT7 1032 aa11.24□□□□□ -0.61
SIMC1-201ENST00000332772 SRCIN1Q9C0H9 1055 aa11.24□□□□□ -0.61
SIMC1-201ENST00000332772 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
SIMC1-201ENST00000332772 AHDC1Q5TGY3 1603 aaPredicted RBP11.24□□□□□ -0.61
SIMC1-201ENST00000332772 COL22A1Q8NFW1 1626 aaPredicted RBP11.24□□□□□ -0.61
SIMC1-201ENST00000332772 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
SIMC1-201ENST00000332772 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
SIMC1-201ENST00000332772 DDX21Q9NR30 783 aaKnown RBP eCLIP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms